mRNA_H-akashiwo_Contig118.28.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK) HSP 1 Score: 343 bits (880), Expect = 2.500e-119 Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 1
Query: 4 DGWDSTACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFHDIGVAAWFAALLPDAIREGDATWNDWGLEGYNTNCFNTAGKTGGQLIQPD 486
DGWDS ACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFHDIGVAAWFAALLPDAIREGDATW+ WGLEGYNTNCFNTAGKTGGQLIQPD
Sbjct: 1 DGWDSAACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFHDIGVAAWFAALLPDAIREGDATWHGWGLEGYNTNCFNTAGKTGGQLIQPD 161
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: A0A7S3UXT1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXT1_HETAK) HSP 1 Score: 223 bits (568), Expect = 3.020e-70 Identity = 97/142 (68.31%), Postives = 115/142 (80.99%), Query Frame = 1
Query: 25 CLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPD-AWRIIDGRLFFFHDIGVAAWFAALLPDAIREGDATWNDWGLEGYNTNCFN 447
C+DA GPV GYDVVAYF LDPL DGV GS EFTS+Y+G+ FYFS++EN ++FES PE YVPAWGGFC+YGV++E+WWTAETM AGV AWR++DGRLF FHD VAA FA LLPDA+R+GDA W WGL+G+N CFN
Sbjct: 86 CMDAELGPVASGYDVVAYFDLDPLSDGVLGSPEFTSIYKGYTFYFSTRENQDRFESSPETYVPAWGGFCSYGVSQESWWTAETMRAGVYASGAWRVVDGRLFLFHDPDVAALFAGLLPDAVRQGDAVWGAWGLDGFNAGCFN 227
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: A0A7S2CFY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CFY1_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.360e-37 Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 1
Query: 25 CLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFF-HDIGVAAWFAALLPDAIREGDATWNDWGLEG--YNTNCF 444
C+ +GPVL GYD+V Y+ L+ DDGV GSS+++ ++FYFS+ +NM FE+DP Y P WGGFC YG++EETWWT T+ P+ W IIDG L+FF + + + GDA W W + NT CF
Sbjct: 73 CIVPTSGPVLSGYDLVEYWNLNSGDDGVIGSSDYSVTIDEYQFYFSNAKNMRSFEADPTSYFPKWGGFCGYGISEETWWTKSTLGPDANPNVWSIIDGDLYFFMFETPQTKFLTGNMTSEKISGDARWTSWFNDTTVLNTGCF 215
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: A0A7S2V1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S8_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.120e-31 Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 28 LDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFHDIGVAAWFAAL-LPDAIREGDATWND-WG-LEGYNTNCF 444
LD GPVL+GYDVV+Y+ D ++GS++ ++Y+G+ F F S ENME F + PE YVP +GGFC YGVAEET+WTA T++A P + I++G L F + V WF L + + EG W +G L +NT F
Sbjct: 32 LDPNTGPVLQGYDVVSYY-QDNKMGPMKGSTKHQALYEGYTFLFHSPENMEVFLAKPEAYVPEFGGFCTYGVAEETYWTASTLAAPANPLVYLILEGHLHVFRSLNVLDWFQKLGVEKGVAEGKVNWAKLYGELPVFNTGIF 172
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: F0Y5C1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5C1_AURAN) HSP 1 Score: 127 bits (319), Expect = 3.780e-31 Identity = 63/159 (39.62%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 1 ADGWDSTACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLF-FFHDIGVAAWFAALLPDAIREGDATWNDWGLEG--YNTNCFNTAGKTGG 468
ADG + C DA AGPVL+G DVVAY L+ + GS EF + Y + F+F+S+ N F +DP +Y P +GGFC+YG+++ET+WT T+ P+ WRI+DGRL F + +F+ + + G+ W+ W + +NT CF T+ GG
Sbjct: 12 ADGPQTEVCTDAAAGPVLDGADVVAYHSLEAGANATYGSPEFEASYGDYSFWFASEANRAAFAADPARYAPKFGGFCSYGISDETFWTKSTLGPFSNPNVWRIVDGRLLVFMYCTPEHKFFSQNITAQLDRGNQIWDTWWGDDLVFNTQCFWTSKMEGG 170
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: A0A6V1WB01_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WB01_HETAK) HSP 1 Score: 115 bits (289), Expect = 2.850e-29 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 1
Query: 40 AGPVLEGYDVVAYFGL-DPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFHDIGVAAWFAALLPDAIREGDATWNDW-GLEG----YNTNCFNTA 453
A PV++GYDVVAYF L + + V G ++ + Y G++FYFS++EN + F PEKYVP +G FC++G++ E++WT T+ V P+ W+I G L F+ F + EG W +W G EG +NT C+ A
Sbjct: 72 AAPVIQGYDVVAYFDLPEDATEAVLGKEDYKANYHGYDFYFSTEENKQAFLGSPEKYVPKYGAFCSWGISAESFWTPSTLGPPVDPNVWQIYAGELLLFYREAAKKKFMVDVNKHFEEGSKRWLNWYGEEGLHDVFNTGCYEGA 215
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: A0A7S2W6K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6K5_9STRA) HSP 1 Score: 114 bits (286), Expect = 6.230e-29 Identity = 59/144 (40.97%), Postives = 80/144 (55.56%), Query Frame = 1
Query: 19 TACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFHDIGVAAWFAALLPDAIREGDATWNDWGLEGYNTNCFNT 450
T C GPVL G DVV YF L + VQGS + + ++F+FS++ N FE +P KY+P +GGFCAYG+ + +W TA+++ PDAWRIIDG+L+ F F A D E + WG Y+T FNT
Sbjct: 58 TECTSPSLGPVLSGVDVVGYFSLSTDEQAVQGSPDLVARVGKYDFFFSTQRNKALFEVNPRKYMPQFGGFCAYGITKNSW-TADSLDLPSDPDAWRIIDGKLYLFKSSSYLEEFVA--GDVETELLGGYKRWGESFYSTVIFNT 198
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: A0A7S2CI31_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CI31_9STRA) HSP 1 Score: 113 bits (283), Expect = 5.180e-28 Identity = 54/147 (36.73%), Postives = 86/147 (58.50%), Query Frame = 1
Query: 16 STACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFF-HDIGVAAWFAALLPDAIREGDATWNDWGLE---GYNTNCF 444
++ CL GPV++GYD+V YF L P DG +G+ EF S + G+ F F + +NM+ F DP Y+P +GGF AY +++++W+TAET+ P+ W+I + +L+FF D + + + I G+ W + + G NT CF
Sbjct: 78 TSECLLTTTGPVMDGYDIVEYFNLKPGADGRKGTEEFESTFGGYTFRFLNNKNMKAFGVDPTSYLPQYGGFDAYQISKDSWYTAETLGPDANPNVWKITNDKLYFFMFDTPLKKFETGNMSARIIAGNQIWRSYFNDTEYGLNTGCF 224
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: A0A7S2XXY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY3_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.270e-27 Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 19 TACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFH 336
T+C + AGPVLEG+DV +YF +P V G +E +++Y+G+ F+F S+ FE P ++P WGGFCAYGVA E WW AET+ A P + II+G+L+ F
Sbjct: 21 TSCANKTAGPVLEGWDVTSYFNGEP----VVGDAEHSAIYEGYIFHFKSELTKSMFEYSPASFLPQWGGFCAYGVAWEKWWNAETLHAPGDPQIYSIINGKLYIFR 122
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Match: A0A7S2FZR2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZR2_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.740e-27 Identity = 52/150 (34.67%), Postives = 87/150 (58.00%), Query Frame = 1
Query: 7 GWDSTACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFF-HDIGVAAWFAALLPDAIREGDATWN---DWGLEGYNTNCF 444
G + C+ GP ++GYD+V YF L+ +G +G+ EF S + G+ F F + +NM+ F S P Y+P +GGF AY ++E+ W+TA+T+ G P+ W+I+D +L+FF D + + + ++ G+ W+ D G NT C+
Sbjct: 70 GRHQSECMLTTTGPAMDGYDLVEYFSLESGANGRKGTEEFESTFAGYTFRFLNNKNMKAFGSMPTSYLPQFGGFDAYSISEDPWYTADTLGPGANPNVWKILDDKLYFFMFDTTMEKFQKGNMSATVKTGNERWDAMFDDTEYGLNTGCY 219 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig118.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig118.28.1 >prot_H-akashiwo_Contig118.28.1 ID=prot_H-akashiwo_Contig118.28.1|Name=mRNA_H-akashiwo_Contig118.28.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=162bp ADGWDSTACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEback to top mRNA from alignment at H-akashiwo_Contig118:862555..865083+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig118.28.1 ID=mRNA_H-akashiwo_Contig118.28.1|Name=mRNA_H-akashiwo_Contig118.28.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2529bp|location=Sequence derived from alignment at H-akashiwo_Contig118:862555..865083+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig118:862555..865083+ >mRNA_H-akashiwo_Contig118.28.1 ID=mRNA_H-akashiwo_Contig118.28.1|Name=mRNA_H-akashiwo_Contig118.28.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=486bp|location=Sequence derived from alignment at H-akashiwo_Contig118:862555..865083+ (Heterosigma akashiwo CCMP452)back to top |