mRNA_H-akashiwo_Contig117.11.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig117.11.1
Unique NamemRNA_H-akashiwo_Contig117.11.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: A0A4D9D0D3_9STRA (Cytochrome c domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0D3_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.220e-98
Identity = 144/228 (63.16%), Postives = 175/228 (76.75%), Query Frame = 1 
Query:    4 AGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRG 687
            AG A  G       DH+PS+DYGW+HHG++A+YD  ++RRGFQVYR+VCASCH++    FRNLVGVTHTE E+K+IA  Y+V DGP+ EGEMFERP KLSD IP PY N++  R AN GA PPDLSL+ KARPGG+DYIFALLTGY+DPPE + +L GL+YNPYFPGGAI+M +QL+DGQ+EYEDGTPAT +Q++ + V TFLAWAAE          PE D R K G
Sbjct:   32 AGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHTEEEVKKIAESYDVVDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARPGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMS-KDVATFLAWAAE----------PEHDYRKKAG 248
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BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: A0A7R9YFS8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFS8_9STRA)

HSP 1 Score: 287 bits (734), Expect = 1.690e-94
Identity = 148/239 (61.92%), Postives = 179/239 (74.90%), Query Frame = 1 
Query:    1 AAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRGHPDHRLLQAL 717
            AA A   GVA ++D DHIPSL+ GW+H+G  ++YD  ++RRGFQVY++VC+SCHS+ R+ FRNLVGV  TE + K++A  YE+ DGP+DEGEMFERP KLSD IP P+ NE+  R AN GA PPDLSL+ KARPGG+DYIF+LLTGYV+ PE +TML GLHYNPYFPGGAI+M KQL DGQVEYEDGTPAT +Q+  + V TFLAW AE          PE D R K G    R+L AL
Sbjct:   14 AAAATTGGVAFASD-DHIPSLNPGWTHNGFFSSYDYKAVRRGFQVYKEVCSSCHSLERIAFRNLVGVCFTEDQAKKLAESYEIVDGPNDEGEMFERPGKLSDYIPGPHANEEAARAANNGAYPPDLSLITKARPGGVDYIFSLLTGYVEAPEGKTMLSGLHYNPYFPGGAIAMPKQLMDGQVEYEDGTPATESQM-AKDVATFLAWCAE----------PEHDERKKAGV---RILAAL 237
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BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: A0A024GLL4_9STRA (Cytochrome c domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GLL4_9STRA)

HSP 1 Score: 285 bits (729), Expect = 1.180e-93
Identity = 138/227 (60.79%), Postives = 177/227 (77.97%), Query Frame = 1 
Query:    7 GAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRG 687
            G+  TGV   ND D +   DYG+ H G ++++D AS+RRG+QVYR+VCASCHS+ R++FRNLVGVTHTE ++K +AA+ +VEDGP+D+GEMF+RP KLSDP+P PY N++    AN GA+PPDLSLMVKARPGG+DY+FALLTGYVDPPE + +L GL+YNPYF GGAI+M +QL+DGQ++YEDGTPAT +Q+  + V  FLAWAAE          PE D R K+G
Sbjct:   22 GSVLTGVTECND-DALSIPDYGFDHKGPLSSFDYASVRRGYQVYREVCASCHSLERISFRNLVGVTHTEEQVKALAADVDVEDGPNDQGEMFDRPGKLSDPLPKPYPNDEAAAAANNGAIPPDLSLMVKARPGGVDYLFALLTGYVDPPEGKELLSGLYYNPYFSGGAIAMERQLQDGQIDYEDGTPATTSQM-AKDVAVFLAWAAE----------PEHDERKKQG 236
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BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: A0A0P5MCT1_9CRUS (Cytochrome c1, heme protein, mitochondrial (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A0P5MCT1_9CRUS)

HSP 1 Score: 281 bits (719), Expect = 2.700e-92
Identity = 141/235 (60.00%), Postives = 177/235 (75.32%), Query Frame = 1 
Query:   19 TGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRGHPDHRLLQALPL 723
            TGVA  +  D I +L YG+ H G ++++D AS+RRG+QVY++VCA+CHSV R+ FRNLVGVTHTE E+K +AA+ +V DGP+ EGEMFERP KLSDP+PSPY N++    AN GA+PPDLSL++K RPGG+DY+FALLTGYVDPPE + +LPGL+YNPYF GGAI+M +QL DGQ+EYEDGTPAT AQ+  + V  FLAWA+E          PE D R K+G      L AL L
Sbjct:   15 TGVAACSG-DQINALPYGFDHLGPLSSFDYASVRRGYQVYKEVCATCHSVERICFRNLVGVTHTEDEVKALAADIDVVDGPNAEGEMFERPGKLSDPLPSPYANDEAAAAANNGAIPPDLSLIIKGRPGGVDYLFALLTGYVDPPEGKELLPGLYYNPYFGGGAIAMERQLRDGQIEYEDGTPATTAQM-AKDVAVFLAWASE----------PEHDVRKKQGMQTVLALSALVL 237
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BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: G5AHH7_PHYSP (Cytochrome c domain-containing protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=G5AHH7_PHYSP)

HSP 1 Score: 281 bits (720), Expect = 2.750e-92
Identity = 145/238 (60.92%), Postives = 179/238 (75.21%), Query Frame = 1 
Query:    7 GAAATGV-ALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRGHPDHRLLQAL 717
            G+  TGV A S+D+  I +L YG+ H G ++++D AS+RRG+QVYR+VCASCHS+ R+ FRNLVGVTHTEAE+KE+AA+ +V DGP+DEGEMFERP KLSDP+P PY N++    AN GA+PPDLSLMVKAR  G DY+FALLTGYVDPPE   +LPGL+YNPYF GGAI+M +QL+DGQ+EYEDGTP T +Q+  + V  FLAWAAE          PE D R K+G      L AL
Sbjct:   22 GSVLTGVTAFSSDQ--IEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEAELKEMAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMVKARHAGADYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQM-AKDVSVFLAWAAE----------PEHDVRKKQGMQTTIALLAL 246
[Close]
BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: A0A7S2BRP9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BRP9_9STRA)

HSP 1 Score: 278 bits (712), Expect = 5.130e-91
Identity = 144/230 (62.61%), Postives = 174/230 (75.65%), Query Frame = 1 
Query:    1 AAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGV-THTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRG 687
            AA AA + V+L +D DH+P+LDYGW HHG +AAYD  ++RRG+QVY++VCA+CHSV RV+FRNLV     +E E+K IA E++  DGP+DEGEMFERP KL+DP+PSPY N+Q GR ANGGALPPDLSLMVK+R  G+DYIFALLTGYVDPPE + ML GLHYNPYF G AI+M   L DGQVE+ D TPATV+Q+  + V  FLAWA+E          PE D R K G
Sbjct:   24 AATAAVSSVSLCSD-DHVPALDYGWGHHGPLAAYDARAVRRGYQVYKEVCATCHSVQRVHFRNLVEYGAWSENEVKAIAEEFDYIDGPNDEGEMFERPGKLTDPLPSPYANDQAGRAANGGALPPDLSLMVKSRHAGVDYIFALLTGYVDPPEGKEMLSGLHYNPYFAGAAIAMPPPLMDGQVEFLDKTPATVSQM-AKDVSVFLAWASE----------PEHDDRKKAG 241
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BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: A0A662X5I4_9STRA (Cytochrome c domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X5I4_9STRA)

HSP 1 Score: 280 bits (715), Expect = 7.080e-91
Identity = 141/228 (61.84%), Postives = 178/228 (78.07%), Query Frame = 1 
Query:    7 GAAATGV-ALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRG 687
            G+  TGV ALS+D+  I +L YG+ + G ++++D AS+RRG+QVYR+VCASCHS+ R+ FRNLVGVTHTEAE+KEIAA+ +VEDGP+DEGEMFERP KLSDP+P PY N++    +N GA+PPDLSL+VK+R GG DY+FALLTGYVDPPE   +LPGL+YNPYF GGAI+M +QL+DGQ+EYEDGTP T +Q+  + V  FLAWA+E          PE D R K G
Sbjct:   68 GSVLTGVTALSSDQ--IEALHYGFDYQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEAELKEIAADIDVEDGPNDEGEMFERPGKLSDPLPRPYANDEAAAASNNGAIPPDLSLIVKSRHGGPDYLFALLTGYVDPPEGMELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQM-AKDVSVFLAWASE----------PEHDVRKKLG 282
[Close]
BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: A0A7S1TQH4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQH4_9STRA)

HSP 1 Score: 276 bits (705), Expect = 4.850e-90
Identity = 136/221 (61.54%), Postives = 166/221 (75.11%), Query Frame = 1 
Query:   25 VALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRG 687
            +A ++D DHIP+L+ GWSH+G  ++YD  S+RRGFQVY++VCA+CHSV  + FRNLV V  +E + K++A  YE+EDGP+DEGEMFERP KLSD IP PY NE+ GR ANGGALPPDL+L+ KARP G +Y+F+LLTGYVDPPE + MLPGLHYNPYF GGAI+M   L DG VEYEDGT AT +Q+  + V TFLAW AE          PE D R K G
Sbjct:   26 LAFASD-DHIPALNPGWSHNGAFSSYDYKSVRRGFQVYKEVCATCHSVEGIAFRNLVNVIFSEKQAKKLAESYEIEDGPNDEGEMFERPGKLSDYIPGPYANEEAGRAANGGALPPDLTLITKARPNGTNYVFSLLTGYVDPPEGKAMLPGLHYNPYFAGGAIAMPAPLTDGAVEYEDGTEATASQM-AKDVSTFLAWCAE----------PEADDRKKNG 234
[Close]
BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: A0A835Z587_9STRA (Cytochrome c1 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z587_9STRA)

HSP 1 Score: 275 bits (704), Expect = 7.850e-90
Identity = 145/230 (63.04%), Postives = 168/230 (73.04%), Query Frame = 1 
Query:    1 AAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDG-PDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRG 687
            A+ AA  G AL ND D IPSL YGW   G ++++D A+IRRGFQVYRQVC+SCHS+  ++FRN VGVTH EA  K++A E+EV D  P+D+GEMFERPAKL D  P PY+NE EGR ANGGALPPDLSLM KAR GGIDY+FALLTGY D P  + +LPGL+YNPYF GGAI+M   L DGQVEYEDGTPATV Q+  + V  FLAW AE          PE D R K G
Sbjct:   21 ASAAAGAGAALCND-DCIPSLSYGWPQDGALSSFDHAAIRRGFQVYRQVCSSCHSIQYISFRNFVGVTHDEAGAKKLAEEFEVTDAQPNDDGEMFERPAKLFDRYPGPYRNEAEGRAANGGALPPDLSLMTKARHGGIDYVFALLTGYADSPAGKDLLPGLYYNPYFAGGAIAMPPPLMDGQVEYEDGTPATVTQM-AKDVSQFLAWCAE----------PEHDERKKFG 238
[Close]
BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Match: A0A2D4CAL0_PYTIN (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAL0_PYTIN)

HSP 1 Score: 286 bits (732), Expect = 1.650e-89
Identity = 143/239 (59.83%), Postives = 180/239 (75.31%), Query Frame = 1 
Query:    7 GAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGVCTFLAWAAEARARRPQEGWPEVDARPKRGHPDHRLLQALPL 723
            G+  TGVA  +  D I +L+YG+ H G ++++D AS+RRG+QVY++VCA+CHSV R+ FRNL+GVTHTE E+K++AAE +V DGP+DEGEMFERP KLSDP+P PY N++    AN GA+PPDLSL+VKARPGG DY+FALLTGYVDPPE + +LPGL+YNPYF GGAI+M +QL DGQ+EYEDGTPAT +Q+  + V  FLAWAAE          PE D R K G      L A+ L
Sbjct:   22 GSVLTGVAACSG-DQIDALNYGFDHQGPLSSFDYASVRRGYQVYKEVCATCHSVERICFRNLIGVTHTEEELKKMAAEIDVVDGPNDEGEMFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARPGGADYLFALLTGYVDPPEGKELLPGLYYNPYFGGGAIAMERQLRDGQIEYEDGTPATTSQM-AKDVSVFLAWAAE----------PEHDERKKMGMQTILALSAMVL 248
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig117.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D0D3_9STRA1.220e-9863.16Cytochrome c domain-containing protein n=2 Tax=Mon... [more]
A0A7R9YFS8_9STRA1.690e-9461.92Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A024GLL4_9STRA1.180e-9360.79Cytochrome c domain-containing protein n=2 Tax=Alb... [more]
A0A0P5MCT1_9CRUS2.700e-9260.00Cytochrome c1, heme protein, mitochondrial (Fragme... [more]
G5AHH7_PHYSP2.750e-9260.92Cytochrome c domain-containing protein n=18 Tax=Pe... [more]
A0A7S2BRP9_9STRA5.130e-9162.61Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A662X5I4_9STRA7.080e-9161.84Cytochrome c domain-containing protein n=2 Tax=Not... [more]
A0A7S1TQH4_9STRA4.850e-9061.54Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835Z587_9STRA7.850e-9063.04Cytochrome c1 n=2 Tax=Tribonema minus TaxID=303371... [more]
A0A2D4CAL0_PYTIN1.650e-8959.83DNA-directed RNA polymerases I and III subunit RPA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig117contigH-akashiwo_Contig117:849387..856458 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog67593.Physo109645
PFAMsCytochrom_C1
Model size754
Max annot lvl4776|Peronosporales
KEGG koko:K00413
KEGG Pathwayko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152
Hectar predicted targeting categoryother localisation
Exons3
Evalue5.14e-93
EggNOG OGsCOG2857@1|root,KOG3052@2759|Eukaryota,3QB6A@4776|Peronosporales
DescriptionCytochrome C1 family
Cds size753
COG categoryC
BRITEko00000,ko00001,ko00002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387105.478588-CDS-H-akashiwo_Contig117:849387..8495541681387105.478588-CDS-H-akashiwo_Contig117:849387..849554Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig117 849388..849554 -
1681387105.494873-CDS-H-akashiwo_Contig117:855697..8557811681387105.494873-CDS-H-akashiwo_Contig117:855697..855781Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig117 855698..855781 -
1681387105.505406-CDS-H-akashiwo_Contig117:855956..8564581681387105.505406-CDS-H-akashiwo_Contig117:855956..856458Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig117 855957..856458 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig117.11.1prot_H-akashiwo_Contig117.11.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig117 849388..856458 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig117.11.1

>prot_H-akashiwo_Contig117.11.1 ID=prot_H-akashiwo_Contig117.11.1|Name=mRNA_H-akashiwo_Contig117.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=251bp
AAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVC
ASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKL
SDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDP
PETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQVNGQGV
CTFLAWAAEARARRPQEGWPEVDARPKRGHPDHRLLQALPLGAAEDSQDQ
L
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mRNA from alignment at H-akashiwo_Contig117:849387..856458-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig117.11.1 ID=mRNA_H-akashiwo_Contig117.11.1|Name=mRNA_H-akashiwo_Contig117.11.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=7072bp|location=Sequence derived from alignment at H-akashiwo_Contig117:849387..856458- (Heterosigma akashiwo CCMP452)
GCTGCTGGTGCCGCTGCTACTGGCGTTGCTTTGAGCAACGATGAGGATCA
CATTCCCTCTCTGGACTATGGATGGTCCCACCATGGTGTCATGGCCGCTT
ATGACACTGCTAGTATTCGTCGTGGTTTCCAGGTTTACCGCCAGGTGTGC
GCCTCTTGCCACAGCGTCAGCAGAGTCAACTTCCGCAATTTGGTTGGCGT
GACACATACAGAGGCCGAGATGAAGGAGATTGCCGCTGAATATGAGGTTG
AGGATGGTCCTGATGATGAGGGGGAGATGTTTGAGAGGCCGGCAAAACTG
AGCGACCCCATTCCCAGCCCGTACAAAAACGAGCAGGAGGGCCGTTTGGC
AAACGGCGGTGCTCTCCCTCCTGATCTATCTCTGATGGTGAAGGCTCGCC
CCGGTGGCATCGACTACATCTTTGCCCTTTTGACTGGCTATGTCGATCCT
CCCGAGACCAGAACCATGCTTCCTGGGCTCCACTACAACCCGTACTTTCC
AGGTAAAGCCACCCCCGAAATGCTCCATTATAAATGCTCATGCATTTGTA
TAACTCTCCTATGAATATGATATAATACAGTCAAATTCTTTCCCTCCCGG
TATCAATTTCAAAACCTAGCTTGATTTCCCCTGAAAAGGACACTTGTTTG
AGAGTTGTTGCAAACTTGTCCTTGTAGGTGGTGCCATCTCGATGGGCAAG
CAGCTCGAGGATGGCCAAGTGGAGTATGAGGATGGTACTCCTGCCACTGT
TGCTCAGGTTAGTGCAAAGGCCAGTTGTACAGACGCCTTTTGAGCACTAA
ACGGTGTTTCTCATGCCACCTTCAAGCAATCTTAAAATGCCTTTTGCACT
GTGAATGACAACCTGTCCTTTAGTACGCCATTCACTCTTTGGTTACATTG
ATGGGAGGGAAATATATATTTTTGATACGTTCTCATGCCTCGTCACATTC
TGAGGAAGGTCCTCTATGCCAGCCGACCATCATGTTGAGCCATCTCTGAG
CTTCTCGATGTGAACCTTGTAGTGAATAGCGCTCGTATCATCGCGCCTTC
CAATGCTTGCGAACATGCTGTAGAAATCTAGTTTGCCAGTAAAATGCGGT
CATCCACTCAATTTTTATGGGTTGGGGTGGTGATGTCATCTATGAAGTGG
CTCATAAGTTCCTGAAGTTCTTTTCGAAAAACCTTTATCCATCTACTAAC
GAACTAAGCATTGTGTCGGTGTGCCGAAAGGTCATCAAGCGCCTTCGCTC
ATTTCTTTACAAAGACATTAATTTGTCTTCCGAAATCTAATTTCTTACAA
AGGTGCATACGCCCAGATTCACGATCGCAGCGCAATAGCTTTTAATGGCG
CCAGAGTTAGTGATTTTTGAATACGGCATTGACGTATATTCAACTTTCGA
AATAACTTTCGAAATGTTCAACATCAATAACAGATTGGTGGGGGAGGATG
CACGTATTTTTAATGGCCCAAAGTCCAAGCTGAATGAAGGAACCGAACAC
CCTACCTGAATCAGTCTGCCTATACTCGCGAATCAAAGAACCGGGCTTCT
TTCCTGGGGCCCTAGAAGCCTTTGAAAATTTATCTGTCGCATGCTACTGG
TAGCCATCACCATTTCCCCCTAATTTCCCTGCAATGGCCAAATTTACCAT
AGCGTAGAACAGCGGCAGAAGGGGAAAAATACTAAAGGGGGCCGAAAAAG
GGCCATTTTGGAAGATTTTCGTAATGTTTTGGAAACTTACACAGTTCATG
AGAAAAAGTGCACAAGATGTAAAAGTTAGAGACAACTCAGCCCTGGCAGT
CATGAATTTGGCTTGTGTTACCAATTTGCTATTAGCTTTGCGTAGCATTT
TCTGCTTGGCTTGCAGTCTCACTTTGAGCTTCCCCACTGTTGAGACACTA
ACGAAGATAGACACAGGCCCCAGTGCCGGGGTCGGCTTTTACCCTTATTA
TGAAGCAAAAGAGCCTTCGCTATTAACGGCAGTGAATGCAGATCCGATTC
TGCGGAATTCCTAGCCCTACGCTAGTCTCCTACTACTACTGCTATTATTC
TGCTTCTTACTAAATATATGCGTGGAGCGCTACTCTGCCAGCACCTTGTC
ACGGCCGTCGTGCCTAGAATTGTTTGCCCAACACTCCCCCTGTCCACCTG
GAGTCTCACAGGGACGGAAGTGTGGATCACCAAGGGCAAAACATCAACAC
CACCAGACCATGCCTTACCAACACCCCCCAGACTTCATGGAGGCAAAGAC
GAAGTGAAGGCTCACAAAGGTGAAGCATGCCCAACTCACTGGGACACCCG
TAGTGTTGCAGCCAAGCATGACAAATCCAACTTGCACTGACTGTCCCCAA
ACTGCTCAAGGAACTTCCTGTAACGGGAGAACCGGCCAGGATATACATGG
CCCAATGGCCAACACATTCGTCTTCATGCAAAATCGGCAAGGCAACCCAG
CCTCCACCACCATTTTGAATGGTCATTGGAAGTGGCTCGTCAGTCACCGT
GAGTTGCGGGCAGGTGCAATGACTGTTTGCATCAGCTGTGTAGCTCTGTG
CTGCAGTCTTCCCTGCCAGGCACACGCCTTGGGGCACACACGCCCGAACA
GTATCCCCCTGCCAGGCAGGTGTCCTGACACCTCTTGGTTTCTCCCCTCT
CGCGGCGGCACCATGCCGAGCCACTGGGGCACACGCCGGGCTGCGAGGGC
TCGGCCCTAGCACCCGTCCTCCCGGCTTCGCGCTCCGGCTGCCGGCTCCG
TCCGCCAGCTCCGGGCCGCGCCTCGTCGTCGGCGCCCGCTGGCGGGGTCC
TTCCAGGTCCCGGCGGGCTGCTCCCCCGCCCGCTCACGCCGTCCATGCTT
TTCGAAGCTCCGCGAGGTCATCCCCTTAGTTGCCCCGCCGTGCTGTTCCA
CACCCTGGTTTTCTCCACAGCGGGCAGGACCTCACCTACCTGCGTGGAGT
CATCATCACTCCCTTCTTGGTGATTAGCATCACCATGGGACACTTATTGT
CGCCTGGCTGACATCATCTGCCCCCTCCTTGGTAGCAGCATTGCAGTCCC
TTGCAAAGTGGCCAGGCTCTGAACACGACCAACATTTCAACACGCCCCCT
CCTTGGGAGCATTCAGCCTGAAAGTGCCCTAGCTGCCCGCAGCTAAAACA
TTTCTTCTTATTTTCGCCATCTTTTCCGGCAAATAAAAGTCCCTGCAATT
CTTCGGCTTTGGTTTTCATTTTATCCCGTTGTTGCTGCGCCATCAGCAGT
CTTTCCATAGCCTCTGTCAGTTTCTCGAGGTAACTGGTCTCGGCTTCGAC
AGTCAAAATCTCGTTTTCGATCAGATCTAGGTCTCCCATCCCCGAAGAAA
CCGCTTGCGCCGGTGAGAGAACCTCATTCAATTTCCCATTGGGCTCACAG
CCCTGCTTAGGTATTTCCTCCGAGTCCATCGTCCCGACCCCTGATTAAAA
CAGCTTTTCCTATCGCTGAGTGAACTGCCGTTAATAGTGTTGAGACACTA
ACGAAGATAGACACAGGCCCCAGTGCCGGGGTCGGCTTTTACCCTTATTA
TGAAGCAAAAGAGCCTTCGCTATTAACGGCAGTGAATGCAGATCCGATTC
TGCGGAATTCCTAGCCCTATGCTAGTCTCCTACTACTACTGCTATTATTC
TGCTTCTTACTAAATATATGCGTGGAGCGCTACTCTGCCAGCACCTTGTC
ACGAAGTCCGTCGTGCCTAGAATTGTTTCCCCAACACCCACCATGTCCTC
GACTCCCTCTTCAAGCATCACTTTGACCTTGTCAGCAGTATATCTCTTCT
GTATCTGTGATGACGCCTTGCATTTCTGTGACATAATTTGGAAGCTTCTT
GCTTGATTTTCCTTAGGTAGAAACAGCGAAGGTTCTAACGAACTGCAGTC
GTCATTTTTTTCTGGTATATGCTGGCATTTCACTTTTGACTAGGCACAAG
CAGCGCGCTTGACTACCCTCGGTCGAACCATAGGTAAAAATGCCAATGTA
TATAAAAAAAAATGCATAGCTCCAGCAGCTAGCGGGAGGAGGAGGAGCAC
AAAAAACGCTGCACGCAATTCAAAAGATGAGGGATGAGGCGGAAAAGAAC
AAGGATGGAGACGAAACAACGGGAAGAAGAGGAGGTGGCAACCAAAGAAG
AAGAATTATATCCTGACTTACAGATCCCGAATTCCCCCAGCAAAAGCTAT
TCAGGGGTGAAATGCGGGTAAAATGTGGGTTTTCGGTATAACAAAGTAGA
GAACTTCGCATTCTTTTTTTTCTTTCAAATACTAAGTACGCTTATCCTCT
GGCGTTGATAGATATGCGGTTTGCGAATGCGTTTTTGTTTCGGGGGGGTA
AAATATGTGCTTCTTTTCGCGAAAACCCCGCATTTCGGAAATTACCAAAA
AATCCCACCCCTTTAGTGTTTTTTTTTCCCAGAAGAAGAAATCACAGGGA
AATGGCGCTGGTCAGTATGTTTCTTTTTGATATGTAGTGGCCGTCACGAT
AAAGGGGGCAGCGCTCTATGGGATGTACGGCAGATTTCGCCAGATTTCGC
GCGCCCAAGACTCGAACCCGGACCCGACGTAAAAAACAAGCAAGTCAAGC
GCCTTAGCCGCACGGCCAGTTGTCCATGCACAATTGCGAAGATTTGAAAA
ATATGACCTTTGATTAAAAAAATTTAAACTGCCTACTAAAAAGCTATATA
AGTCAAAAACTAAATTTCCGCAATCGCGGTAAATTAGCTCATATTTTTCG
CCGCTAAGCTGCGAACATTTTCAGCTAATTTCCTGCGATTGCGGAAATGT
AGAACGCGATTTTTATTTTCGGGGCATTCCGCCGCAAAATACCCCCGTTT
ATCGTGACGGCCACTATGTATCTTCCAGCACTTTGTTTCATCAGTCCAAT
CGGATTAAGGTATCAGCCTTTTCCAGTTGAATCAATCTGTCGAAATATGA
TGAATGCCGAATGGTGGGCGTTCCTCCGAATGGTGGGTGTTCCTCCTTCC
TCCTCCTCCTCTATATAGTGCATATAGGAAGTTGTCGTTTTCGTTGTTGT
GATAATAATGTTTTTATTTTCGTTGTTGTGGTCGTTGTCGTGTTATCGCT
CTCGCCCTCAATGGTTTTGCGTGCGTTTATTGTTCTGCGGGAATTTCGTG
GTTCTCGATTCTCCATTGCGGGAAAAAATATATATATCTTTAAAAGTTTG
TGTCGGAAAATTCGAAATGTACAACTGTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTGGGGGGGGGATTTGGTCAAATCCTTGTTTACTTTAGCCTGACAC
CGACTCAATAGTCCCTCACAGGTTGGGTGTAATTTTTGGCTGAGGAGGCA
GCCACCTCATTAGAGGGTGGTCCTTCACCTGCTTCAAGACCAGAGGAACT
GGCGGCCCGGGAGATTTCTTCCCTACTGTACCATCTTCAATATAATGCAC
TAGGCTTCTCCTTCTCCCTTCAAGGCATTAGAAGGTGTGCCACAGTTTAG
TGGGTTGAAGAAGTTTCACTGCTAGGTAAAGTATACACCACTTGTGCAAA
GAAAAGGACACGGTTTTCTGGCCAGGGAGGACAACATGTCTTTAGACTTA
TGGTGCAATCTAGCGATGGCTATGTTTGAAGGTTTTTCGATCGTAGCTCG
TTCTGTCCATGGCAAATCGAAAAACTGATGATATAGGTTGCGCTGCACAA
CTTTTTACCTAGAATCCCAAAAAAAAACTGTCCATGGTCAGCGAAAGTTT
TTTCAAAGGTCGCTTTTTGACCAACCCAGTTTTTTTATTTGCCATGTACG
AGATGCGCTATAAAACCTATTGAAGGTCCAGTGTGGTTGTGGTTGTTTTG
ACCGGTTTTGAATTTCCGTATTCCGCAATTCCAAAAGAACAGGGCTCTCA
CAACGTGGTGTGGTTACTGCAAGGACGACAAAGCTATCACGACACGCAGA
ATTCAATAATTATTTTACCAGTGGCAAGGCTCAGTGCAACCATGCAATCA
TTTTTCACGGCACTTAGGGTTCATTTCACCTCTGAGTGGCACCTGGAGCA
TGTATCTTCGGGTGCATTGATTCTTTTAGAGGTTGATATGCGGTTGATAT
GCCCATCCTGTGTGCCCCATCTCTCATTTCTTGTTCAAACGCGTGCGTCT
TGAATGGCATGGCATTACTTTTCAGTGAGATATTCATGGGTTTATGCAGG
TAAACTTTGGTAATTATGAAAAACACCATCGAAACATGAAATCTAACTGT
ACCTGCGCTTGTAAGTGGCGTTGCCATGCATAGATACCTCCTTTACGCAG
ATTTACATGCATTATGGTTACCCAGAAATGGCGACTCTCTGGTGTGTGCA
CCACATATCGCTCGTACCACCGCCAAATCGCTTGATCACATTTCTATATA
TGTCTAAAGGTATCGATGAATGGCTAACATATTTGTCAAACAAGCTTTCT
TTGCCGAGATACCGGGGGACCCTTGAAACATAACTCTTGCTTGATTGAAC
CATCTGGCTGTTTTTGAAACTCTGCTTGAAGCCAGTATCATTTTTATACC
CTAGCACGAGGTTTCGGCATCTGATTGCTTCTGGGCTGGTCGCGGCGCTG
GTGGGTGGCTGTCGTCGTTGTGGTGGTATTACGAGGAGTATACAAGCAGG
CGCAGCAGAGAGATACACAGGCTCACAAGGAGAAACCAAGGCTATAGCCA
TCCCGTGATCGCGGTCCGTGACTATGTACATATCCATATTTCATAATATG
AGGATTGCCACCAAAGATCATCTCTATGTCTAGCGTGTCTTTTTCTCTTC
TAGTTGTTGTTGTTCTTCTTCTTTCCAAAAAATTCATTGATTGGACAAAC
AGTTTTATTCTTTTCTGACTTTTTATTTTGATTGGATGCACAAACGCCAA
AGAGATGGCCAGGGCGTGTGCACATTCCTTGCCTGGGCGGCCGAGGCGAG
AGCACGACGACCGCAAGAAGGGTGGCCTGAAGTGGATGCTCGCCCTAAGC
GCGGCCATCCTGATCACAGGCTACTACAAGCGCTTCCGCTGGGCGCCGCT
GAAGACTCGCAAGACCAGCTAC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig117:849387..856458-

>mRNA_H-akashiwo_Contig117.11.1 ID=mRNA_H-akashiwo_Contig117.11.1|Name=mRNA_H-akashiwo_Contig117.11.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=753bp|location=Sequence derived from alignment at H-akashiwo_Contig117:849387..856458- (Heterosigma akashiwo CCMP452)
GCTGCTGGTGCCGCTGCTACTGGCGTTGCTTTGAGCAACGATGAGGATCA
CATTCCCTCTCTGGACTATGGATGGTCCCACCATGGTGTCATGGCCGCTT
ATGACACTGCTAGTATTCGTCGTGGTTTCCAGGTTTACCGCCAGGTGTGC
GCCTCTTGCCACAGCGTCAGCAGAGTCAACTTCCGCAATTTGGTTGGCGT
GACACATACAGAGGCCGAGATGAAGGAGATTGCCGCTGAATATGAGGTTG
AGGATGGTCCTGATGATGAGGGGGAGATGTTTGAGAGGCCGGCAAAACTG
AGCGACCCCATTCCCAGCCCGTACAAAAACGAGCAGGAGGGCCGTTTGGC
AAACGGCGGTGCTCTCCCTCCTGATCTATCTCTGATGGTGAAGGCTCGCC
CCGGTGGCATCGACTACATCTTTGCCCTTTTGACTGGCTATGTCGATCCT
CCCGAGACCAGAACCATGCTTCCTGGGCTCCACTACAACCCGTACTTTCC
AGGTGGTGCCATCTCGATGGGCAAGCAGCTCGAGGATGGCCAAGTGGAGT
ATGAGGATGGTACTCCTGCCACTGTTGCTCAGGTTAATGGCCAGGGCGTG
TGCACATTCCTTGCCTGGGCGGCCGAGGCGAGAGCACGACGACCGCAAGA
AGGGTGGCCTGAAGTGGATGCTCGCCCTAAGCGCGGCCATCCTGATCACA
GGCTACTACAAGCGCTTCCGCTGGGCGCCGCTGAAGACTCGCAAGACCAG
CTA
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