mRNA_H-akashiwo_Contig1162.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: B7G019_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G019_PHATC) HSP 1 Score: 139 bits (350), Expect = 2.670e-37 Identity = 70/166 (42.17%), Postives = 104/166 (62.65%), Query Frame = 1
Query: 13 ENQPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVVVACKLTG 510
E+QPH+ +MR ILVDW+V VH + L P TL+L VN++DRF + + R +LQLVGVTSL+IA+KY ++ P + Y+ AY+ DI EME IL T+ + +++P+ +FL YL +LS YI + +LQ D +LPS +AA++V +A + G
Sbjct: 77 ESQPHINERMRSILVDWLVEVHLKFKLVPETLYLTVNIIDRFLQIHKVSRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRPDIIEMEECILKTLGYQITIPSAHAFLVRYLKAGHADKRIVQLSCYILDSTLQSYDLLRYLPSQLAAAAVFIARRTVG 242
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: B8BZQ6_THAPS (Cyclin putative cyclin (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZQ6_THAPS) HSP 1 Score: 130 bits (327), Expect = 1.770e-35 Identity = 63/158 (39.87%), Postives = 103/158 (65.19%), Query Frame = 1
Query: 16 NQPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVV 489
+Q + +KMR ILVDW+V VH + L P TL+L VN++DR+ S + R++LQL+GVT+L++A K+ ++ P + C Y+T AY ++ +ME++IL +D+ +SVPT FL +L+ + S + +N+ E+SLQ D + PSL+ A++VV
Sbjct: 3 SQNDINAKMRAILVDWLVEVHMKFRLHPETLYLCVNIIDRYCSKVDVKRSKLQLIGVTALLVACKHEEIYPPEVRDCVYITDRAYDRQEVLDMEQSILKELDWKISVPTAYPFLHRFLSITGASEMTRHAANFYMERSLQEHDLLNYRPSLVCAAAVV 160
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: A0A6U6K965_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6K965_9STRA) HSP 1 Score: 132 bits (333), Expect = 4.950e-35 Identity = 67/161 (41.61%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 13 ENQPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVVVA 495
+ Q + +KMR ILVDW+V VH + L P TL+L +N++DR+ S + R++LQLVGVT+L+IA KY ++ P + C Y+T AY+ ++ +ME++IL + F ++VPT FL +L + S ++ +NY E++LQ D F PS++AAS+VV+A
Sbjct: 27 DQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLA 187
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: A0A5A8DQI9_CAFRO (Cyclin N-terminal domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DQI9_CAFRO) HSP 1 Score: 134 bits (337), Expect = 5.870e-35 Identity = 69/168 (41.07%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 16 NQPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVVVACKLTGDDT 519
+Q V +KMR ILVDW++ VH + L P TL+L VN++DR+ KP++RT+LQLVGVT++++A+KY ++ P K ++T AYS ++I +ME +L + F ++VPT FL Y + K L+ Y E+ LQ D FLPSL A+++V A + G T
Sbjct: 111 HQTDVNAKMRAILVDWLLEVHFKFKLLPETLYLTVNIIDRYLERKPVVRTKLQLVGVTAMLVASKYEEIYPPEVKDFVFITSNAYSHEEILDMEARMLNALRFEVTVPTAWIFLGRYCKVAMLDTRTKLLAQYYVERCLQEYDMLRFLPSLQASAAVHAAMRTLGTGT 278
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: A0A1E7FEB9_9STRA (Cyclin_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEB9_9STRA) HSP 1 Score: 132 bits (332), Expect = 5.900e-35 Identity = 65/166 (39.16%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 13 ENQPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVVVACKLTG 510
+NQ H+ +MR ILVDW+V VH + L P TL+L +N++DR+ + + R +LQLVGVTSL+IA+KY ++ P + Y+ AY+ +I EME IL T+++N+++P+ +FL +L + +LS YI + +LQ + +LPS +AA++V +A + G
Sbjct: 44 DNQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRTEIIEMEEKILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRTVG 209
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: A0A812S730_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812S730_9DINO) HSP 1 Score: 134 bits (338), Expect = 6.300e-35 Identity = 72/162 (44.44%), Postives = 102/162 (62.96%), Query Frame = 1
Query: 19 QPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVVVACKL 504
Q + +KMR ILVDW+V VH Y L P TLF+AVNV+DR+ S++ + R +LQL GVT+L+IA+K+ ++ P K Y+T AY+ DDI ME +IL T++F L PT FL Y + S L Y+AE L V ++PSL+AA+S +++ KL
Sbjct: 139 QREINTKMRAILVDWLVEVHMKYRLKPETLFMAVNVIDRYLSMRQVARKKLQLCGVTALLIASKFEEIYPPEVKDFVYITDNAYTKDDILRMEVSILSTLNFELCGPTAAHFLDRYQRANKCSEEHAHLMQYLAELCLLEVHMVQYVPSLVAAASALLSNKL 300
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: A0A6U7XGX0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U7XGX0_9EUGL) HSP 1 Score: 133 bits (334), Expect = 1.300e-34 Identity = 72/164 (43.90%), Postives = 97/164 (59.15%), Query Frame = 1
Query: 19 QPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVVVACKLTG 510
Q V KMR ILVDW+V VH + L P TLFLAV ++DRF K + R +LQLVGV ++++AAKY ++ P K Y+ Y+ DDI MER + T++FNL+VPTV FL L ++L+ Y+AE SL + PSLI AS + +A K G
Sbjct: 108 QTDVNEKMRTILVDWLVDVHLKFKLLPETLFLAVEIIDRFLDKKVVSRQKLQLVGVVAMLLAAKYEEIYPPEVKDFIYIAANTYTRDDILRMERLMFATLEFNLTVPTVYVFLQRGLQVMEADTKTRQLAQYLAELSLLDYKLLAYAPSLIGASCIYLANKYVG 271
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: A0A6D2KXE9_9BRAS (Cyclin N-terminal domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KXE9_9BRAS) HSP 1 Score: 132 bits (331), Expect = 1.360e-34 Identity = 70/161 (43.48%), Postives = 103/161 (63.98%), Query Frame = 1
Query: 13 ENQPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVVVA 495
+ QP + KMR IL+DW+V VH ++LSP TL+LA+N++DRF S+K + QLQL+GVT+L+IA+KY D+ P A LT G YS I ME IL +++++L+VPT FL + + + A + + +Y+AE L + F PSL+AAS+V A
Sbjct: 62 QTQPEINEKMRSILIDWLVDVHFMFDLSPETLYLALNLIDRFLSLKTVQGGQLQLLGVTALLIASKYEDMWPPQVDDLACLTDGTYSNKQILVMEETILASLEWHLTVPTQYVFLVRFTKAAVSDAEVENMVHYLAELGLTHYETLKFPPSLLAASAVYTA 222
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: A0A1Z5K2M1_FISSO (Cyclin B n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2M1_FISSO) HSP 1 Score: 134 bits (336), Expect = 1.460e-34 Identity = 67/166 (40.36%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 13 ENQPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVVVACKLTG 510
ENQ H+ +MR ILVDW+V VH + L P TL+L +N++DRF + + R +LQLVGVTSL+IA+KY ++ P + Y+ AY+ DI +ME IL T+++N+++P+ +FL +L +LS YI + +LQ + +LPS +AA++V +A ++ G
Sbjct: 151 ENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINMIDRFLEKERVSRPRLQLVGVTSLLIASKYEEIFPPELRDLVYICDKAYTKQDILQMEELILKTLEYNVTIPSAHAFLVRFLKAGHADKKIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRVVG 316
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Match: A0A7R9W0K7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0K7_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.210e-34 Identity = 65/161 (40.37%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 13 ENQPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKPILRTQLQLVGVTSLMIAAKYYDVKSPTAKQCAYLTGGAYSVDDIFEMERNILVTVDFNLSVPTVQSFLSLYLAKSATSAHAKKLSNYIAEQSLQFVDAQIFLPSLIAASSVVVA 495
++Q + +KMR ILVDW+V VH + L P TL+L +N++DR+ S+ + R++LQLVGVT+L+IA KY ++ P + C Y+T AY+ ++ +ME+++L + F ++VPT FL +L + +S A+ +NY E++LQ D F PS++A S+V++A
Sbjct: 173 DHQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSLVTVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLNMAKSSQLARIAANYYTERTLQEHDLLRFKPSVVAVSAVILA 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1162.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1162.1.1 >prot_H-akashiwo_Contig1162.1.1 ID=prot_H-akashiwo_Contig1162.1.1|Name=mRNA_H-akashiwo_Contig1162.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=173bp ANSWENQPHVTSKMREILVDWVVMVHASYNLSPATLFLAVNVLDRFASVKback to top mRNA from alignment at H-akashiwo_Contig1162:60128..60646+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1162.1.1 ID=mRNA_H-akashiwo_Contig1162.1.1|Name=mRNA_H-akashiwo_Contig1162.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=519bp|location=Sequence derived from alignment at H-akashiwo_Contig1162:60128..60646+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1162:60128..60646+ >mRNA_H-akashiwo_Contig1162.1.1 ID=mRNA_H-akashiwo_Contig1162.1.1|Name=mRNA_H-akashiwo_Contig1162.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=519bp|location=Sequence derived from alignment at H-akashiwo_Contig1162:60128..60646+ (Heterosigma akashiwo CCMP452)back to top |