mRNA_H-akashiwo_Contig1.207.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: A0A7S3LBR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBR9_9STRA) HSP 1 Score: 179 bits (454), Expect = 2.530e-54 Identity = 89/140 (63.57%), Postives = 107/140 (76.43%), Query Frame = 3
Query: 180 SRTIAQHTKMLRMEASTLSEPDTAE----KMVP----MTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
+R QH R+ A+T ++ TA+ K +P M EIVSLCK+RG IFPSSEIYNG+ GFYDYGPLGSELKKN+KDAWW+ V RED+VGLDSSII +PK W +SGH+ GFSDPMVDCKE+K R+RADQ+FFS V
Sbjct: 19 ARPTLQHASS-RLFATTEADAQTADAPKVKELPVKYNMEEIVSLCKRRGIIFPSSEIYNGYAGFYDYGPLGSELKKNVKDAWWKTFVTQREDVVGLDSSIIHNPKTWKSSGHVDGFSDPMVDCKETKLRFRADQIFFSPV 157
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: D8LCT3_ECTSI (Glycine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT3_ECTSI) HSP 1 Score: 186 bits (471), Expect = 6.350e-54 Identity = 81/103 (78.64%), Postives = 95/103 (92.23%), Query Frame = 3
Query: 267 MTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
M E+V LCK+RGF+FPSSEIYNGF GF+DYGPLG ELKKNIKDAWW+DVV++R+DIVG+DSSII +PK+W ASGH+AGFSDPMVDCKESK RYRADQLF+ +V
Sbjct: 115 MDELVGLCKRRGFVFPSSEIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKV 217
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: B5JMZ8_9BACT (Glycine--tRNA ligase n=1 Tax=Verrucomicrobiae bacterium DG1235 TaxID=382464 RepID=B5JMZ8_9BACT) HSP 1 Score: 186 bits (472), Expect = 3.040e-53 Identity = 84/111 (75.68%), Postives = 95/111 (85.59%), Query Frame = 3
Query: 243 DTAEKMVPMTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
D A K PM IV+LCK+RGFIF SSEIY G+NGF+D+GPLGSE+KKNIKDAWW+D+V RED+VGLDSSII PKIW ASGH+ GFSDPMVDCKESK RYRADQLFF+ V
Sbjct: 4 DKASKSNPMDPIVALCKRRGFIFQSSEIYGGYNGFFDFGPLGSEIKKNIKDAWWKDMVHRREDVVGLDSSIIMHPKIWVASGHVGGFSDPMVDCKESKMRYRADQLFFAPV 114
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: A0A7R9YDS6_9STRA (Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDS6_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.460e-52 Identity = 85/130 (65.38%), Postives = 108/130 (83.08%), Query Frame = 3
Query: 189 IAQHTKMLRMEA-STLSEPDTAEKMVPMTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
+AQ ++ L + A ++ ++ + + M ++VSLCK+RGF+F SSEIYNGFNGFYDYGPLG ELKKNIK+AWW+ VV +R+D+VG+DSSII SPK+W ASGH+AGFSDPMVDCKESK RYRADQLFF +V
Sbjct: 10 LAQRSRQLTLGAIASGADVQDVDFELGMEDVVSLCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKKNIKEAWWRAVVYARDDVVGIDSSIIMSPKVWEASGHVAGFSDPMVDCKESKMRYRADQLFFGKV 139
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: A0A835YRJ7_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ7_9STRA) HSP 1 Score: 183 bits (464), Expect = 5.220e-52 Identity = 81/103 (78.64%), Postives = 94/103 (91.26%), Query Frame = 3
Query: 267 MTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
M E+V+LCK+RGF+F SSEIYNGF GF+DYGPLG E+KKNIKD WW+DVVR R+DIVGLDSSIIGSPKIW ASGH+AGFSDPMVDC+ESK RYRADQ+F++ V
Sbjct: 1 MEELVALCKRRGFVFQSSEIYNGFAGFFDYGPLGVEIKKNIKDLWWRDVVRRRDDIVGLDSSIIGSPKIWEASGHVAGFSDPMVDCRESKLRYRADQVFWARV 103
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: A0A7X1E6A8_9BACT (Glycine--tRNA ligase n=1 Tax=Puniceicoccus vermicola TaxID=388746 RepID=A0A7X1E6A8_9BACT) HSP 1 Score: 180 bits (456), Expect = 7.660e-51 Identity = 79/113 (69.91%), Postives = 93/113 (82.30%), Query Frame = 3
Query: 237 EPDTAEKMVPMTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
E TA K V M E++ LC++RGF+F SSEIY G NGF+DYGPLG EL+KNIKDAWWQD+V R+D+VG+D SII PK+W ASGH+ GFSDPMVDCKESK RYRADQLFF+ V
Sbjct: 4 EQSTAPKTVTMDEVIGLCRRRGFVFQSSEIYGGINGFFDYGPLGVELRKNIKDAWWQDMVHRRDDVVGVDCSIIMHPKVWQASGHVDGFSDPMVDCKESKMRYRADQLFFAPV 116
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: A0A6U1N9R4_9STRA (Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N9R4_9STRA) HSP 1 Score: 179 bits (455), Expect = 8.590e-51 Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 3
Query: 267 MTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
M EIV+LCK+RG IF SSEIYNGF GFYD+GPLG EL+ NIK AWW+D+V REDIVGLDSSII SP IW ASGH+ GFSDPMVDCKESKNRYRADQLFF++V
Sbjct: 1 MDEIVALCKRRGIIFQSSEIYNGFQGFYDFGPLGVELRNNIKQAWWKDMVHGREDIVGLDSSIIASPAIWKASGHVDGFSDPMVDCKESKNRYRADQLFFAKV 103
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: A0A7S3YTH2_9EUKA (Glycine--tRNA ligase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YTH2_9EUKA) HSP 1 Score: 181 bits (460), Expect = 9.860e-51 Identity = 96/186 (51.61%), Postives = 122/186 (65.59%), Query Frame = 3
Query: 27 AYLVGNTFKARL---LRRKENMFKIVLRFSAIMALFIGSAAFTTSYKRFGRLSASRTIAQHTKMLRMEASTLSEPDTAEKMVPMTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
A + +TF A LR M ++V R LF G A R R+S +++ + + A+ + + K+V M E+VSLCK RG +FPSSEIY G++GF+DYGPLG+EL+KNIKD WWQ V REDIVGLD+SII SP +W ASGH+ GFSDPMVDCKESK RYRADQLFF++V
Sbjct: 28 ALIAFSTFSAPAPASLRSSAQMSRLVNR----TPLFRGCAGAAPVASR--RVSNPGGVSRVQQRVYSAATEEKQTEAVRKLVSMDELVSLCKHRGIVFPSSEIYGGYSGFWDYGPLGTELRKNIKDRWWQRFVTQREDIVGLDTSIIASPSVWKASGHVEGFSDPMVDCKESKLRYRADQLFFAKV 207
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: F0XWZ5_AURAN (Glycine--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWZ5_AURAN) HSP 1 Score: 178 bits (452), Expect = 1.050e-50 Identity = 77/103 (74.76%), Postives = 93/103 (90.29%), Query Frame = 3
Query: 267 MTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
M E+VSLCKKRGF+F SSEIYNGFNGFYDYGPLGSELK+NIK+ WW+D+VR+R+D+ G+DSSII SP+IW ASGH+ GFSDPMVD K +K RYRADQLF++E+
Sbjct: 1 MEEVVSLCKKRGFVFGSSEIYNGFNGFYDYGPLGSELKRNIKERWWRDMVRARDDVCGVDSSIIASPRIWEASGHVGGFSDPMVDDKTTKKRYRADQLFYAEL 103
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Match: UPI0019BC6565 (Glycine--tRNA ligase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019BC6565) HSP 1 Score: 171 bits (433), Expect = 2.980e-50 Identity = 76/109 (69.72%), Postives = 90/109 (82.57%), Query Frame = 3
Query: 249 AEKMVPMTEIVSLCKKRGFIFPSSEIYNGFNGFYDYGPLGSELKKNIKDAWWQDVVRSREDIVGLDSSIIGSPKIWAASGHLAGFSDPMVDCKESKNRYRADQLFFSEV 575
AE M +VSL K+RGF+F SSEIY G NGF+DYGPLG ELKKNI+D WW D+VR R+D+VG+++SII PK+W ASGH+AGFSDP+VDCK SKNRYRADQLFFS V
Sbjct: 6 AEPANLMEAVVSLAKRRGFVFQSSEIYGGLNGFFDYGPLGVELKKNIRDCWWSDMVRRRDDVVGIETSIIMHPKVWEASGHVAGFSDPLVDCKVSKNRYRADQLFFSPV 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.207.1 >prot_H-akashiwo_Contig1.207.1 ID=prot_H-akashiwo_Contig1.207.1|Name=mRNA_H-akashiwo_Contig1.207.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=165bp MFKIVLRFSAIMALFIGSAAFTTSYKRFGRLSASRTIAQHTKMLRMEASTback to top mRNA from alignment at H-akashiwo_Contig1:8810761..8813798- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.207.1 ID=mRNA_H-akashiwo_Contig1.207.1|Name=mRNA_H-akashiwo_Contig1.207.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=3038bp|location=Sequence derived from alignment at H-akashiwo_Contig1:8810761..8813798- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:8810761..8813798- >mRNA_H-akashiwo_Contig1.207.1 ID=mRNA_H-akashiwo_Contig1.207.1|Name=mRNA_H-akashiwo_Contig1.207.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=495bp|location=Sequence derived from alignment at H-akashiwo_Contig1:8810761..8813798- (Heterosigma akashiwo CCMP452)back to top |