mRNA_H-akashiwo_Contig1148.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1148.2.1
Unique NamemRNA_H-akashiwo_Contig1148.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: A0A7S3XQG1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQG1_HETAK)

HSP 1 Score: 475 bits (1222), Expect = 7.000e-167
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 1
Query:    1 GEDEELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWRVAAGKKAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFADNEAVAQ 789
            GEDEELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWRVAAGKKAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFADNEAVAQ
Sbjct:   22 GEDEELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWRVAAGKKAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFADNEAVAQ 284          
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: H3GA29_PHYRM (DUF4201 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3GA29_PHYRM)

HSP 1 Score: 279 bits (714), Expect = 4.580e-90
Identity = 168/280 (60.00%), Postives = 209/280 (74.64%), Query Frame = 1
Query:    1 GEDE--ELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWRVAAGKK-----APLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFADNEAVAQVHTKGSGRVQ 819
             EDE  EL  KL+ V  + D L  E  +LESY  R+ Q   G D+  K+  + A G +     A + LTIEQK +I + EL+ +Q+E+EETKR+SE+LIDTLRAVLEET IRI+ELK+DAYEFKRDIVVGAEN RTG+T+AEK++RYME+KLRQ+DA++EKLRLKNATLK+Q QK++ QLR KEEMGD LHYIDFHQLQIENKQ++AKIEERNEELL+LK TTG  VQ LNNLK +L +L  ES ++  EI  RTE  EKI  +   V + + K   R+Q
Sbjct:    2 NEDELDELEAKLDDVAHQNDVLKQENELLESYLQRNGQPTTGSDDEEKQTDKKAGGSRQRRVRAQVMLTIEQKNDICSTELEAAQKELEETKRSSERLIDTLRAVLEETDIRIAELKKDAYEFKRDIVVGAENFRTGKTIAEKMIRYMEEKLRQKDAIVEKLRLKNATLKSQAQKIDAQLRHKEEMGDALHYIDFHQLQIENKQYVAKIEERNEELLRLKQTTGSTVQVLNNLKKRLHELLEESAWVQGEIRTRTELNEKIVEEITLVEEKNQKDMHRLQ 281          
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: A0A485KME4_9STRA (Aste57867_9115 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KME4_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.110e-89
Identity = 167/263 (63.50%), Postives = 201/263 (76.43%), Query Frame = 1
Query:   10 EELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWRV------AAGKKAP---LTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFAD 771
            EEL  KLE   R+ + L  E  + ESY  R++Q     DE  K+   +        G++ P    T+TIEQK +I++AEL+E+Q+E+EETKR SE+LIDTLRAVLEET IRISELK DAYEFKRDIVVGAEN RTG+T+AEK+VRYMEDKLR +DA++EKLRLKNATLK+Q QK++ QLRQKEEMGD LHYIDFHQLQIENKQ++AKIEERN+ELLKLK TTG  VQ LNNLK +L  L  ES +L  EI ARTE  EK+ A+
Sbjct:    8 EELETKLEEALRQNEQLAHENELFESYLKRNAQPNMAADEEEKKEKALDKTNQKKQGQRRPRPQATITIEQKNDISSAELEEAQKEVEETKRTSERLIDTLRAVLEETDIRISELKMDAYEFKRDIVVGAENFRTGKTIAEKMVRYMEDKLRAKDAIVEKLRLKNATLKSQAQKIDAQLRQKEEMGDALHYIDFHQLQIENKQYVAKIEERNDELLKLKQTTGNTVQLLNNLKQKLNDLIDESAWLRAEIKARTELNEKVVAE 270          
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: A0A8K1CQ56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ56_PYTOL)

HSP 1 Score: 275 bits (704), Expect = 1.640e-88
Identity = 160/273 (58.61%), Postives = 205/273 (75.09%), Query Frame = 1
Query:   10 EELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKR----RWRVAAGKKAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFADNEAVAQVHTKGSGRV 816
            +EL  KLE + R+ D L  E  + +SY  R ++ + G D+  K+            +A + LT+EQK +I++ EL+ + +E+EETKR SE+LIDTLRAV+EET IRI+ELK+DAYEFKRDIVVGAEN RTG+T+AEK++RYME+KLRQ+DA+IEKLRLKNATLK+Q QK++ QLR KEEMGD LHYIDFHQLQIENKQ++AKIEERNEELLKLK TTG  VQ LNNLK +LQ+L  ES +L  EI +RTE  EKI  +   +   + K S ++
Sbjct:    7 DELETKLEDLTRQNDVLKQENELFDSYLGRQAEGLAGSDDDEKKDXXXXXXXXXXARAQVMLTMEQKNDISSTELEAAHKELEETKRTSERLIDTLRAVIEETDIRIAELKKDAYEFKRDIVVGAENFRTGKTIAEKMIRYMEEKLRQKDAVIEKLRLKNATLKSQAQKIDAQLRHKEEMGDALHYIDFHQLQIENKQYVAKIEERNEELLKLKQTTGNTVQVLNNLKKKLQELMEESTWLQNEIQSRTELNEKIIEEIAQIDDQNQKDSRKI 279          
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: A0A3F2RQ37_9STRA (DUF4201 domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQ37_9STRA)

HSP 1 Score: 274 bits (701), Expect = 3.620e-88
Identity = 165/277 (59.57%), Postives = 205/277 (74.01%), Query Frame = 1
Query:   10 EELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKR--RWRVAAGKK-----APLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFADNEAVAQVHTKGSGRVQ 819
            +EL  KL+ +  + D    E  +LESY  R+ Q   G D+  KR  R +  AG +       + LTIEQK +I + EL+ +Q+E+EETKR+SE+LIDTLRAVLEET IRI+ELK+DAYEFKRDIVVGAEN RTG+T+AEK++RYME+KLRQ+DA++EKLRLKNATLK+Q QK++ QLR KEEMGD LHYIDFHQLQIENKQ++AKIEERNEELL+LK TTG  VQ LNNLK +L +L  ES +L  EI  RTE  EKI  +   V   + K   R+Q
Sbjct:    7 DELEAKLDDLAHQNDVFKQENELLESYLQRNGQPTTGSDDEEKRDDRDKKLAGVRQRRVRTQIMLTIEQKNDICSTELEAAQKELEETKRSSERLIDTLRAVLEETDIRIAELKKDAYEFKRDIVVGAENFRTGKTIAEKMIRYMEEKLRQKDAIVEKLRLKNATLKSQAQKIDAQLRHKEEMGDALHYIDFHQLQIENKQYVAKIEERNEELLRLKQTTGNTVQVLNNLKKRLHELLEESTWLQGEIRTRTELNEKIVEEITLVEDKNQKDMRRLQ 283          
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: A0A836CMH5_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH5_9STRA)

HSP 1 Score: 272 bits (695), Expect = 5.990e-87
Identity = 155/249 (62.25%), Postives = 194/249 (77.91%), Query Frame = 1
Query:   25 KLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWRVAAGKKAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFAD 771
            +LE++  E + L +E  +L+ YY R++ +  G++E  + R R    + AP TLT+EQK E+A AE   + + +EE KR SE+LIDTL AVLEET IRI+ELK+DAYEFKRD+VVGAENMRTG+TVAEKVVRYMEDKLRQRD   EKLRLKNA LK QIQKVE QLRQK++MGD LHYIDFHQLQIENKQH+A+IEERN ELL+LK  TG+AVQ+L++LK  LQ+  ++S++L  E+AART  L K   D
Sbjct:   28 RLEQLHDESEELTLENSILKDYYERNAADGVGDEEDKRLRNRQRRRQAAPTTLTLEQKAEVAEAEHAVAVQTLEEAKRGSERLIDTLHAVLEETDIRIAELKKDAYEFKRDVVVGAENMRTGKTVAEKVVRYMEDKLRQRDTTTEKLRLKNAALKGQIQKVEAQLRQKDDMGDALHYIDFHQLQIENKQHVARIEERNAELLRLKSATGRAVQALSSLKGALQQAQADSDWLAAEMAARTAALAKTTTD 276          
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: A0A1V9YA48_9STRA (DUF4201 domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YA48_9STRA)

HSP 1 Score: 271 bits (694), Expect = 6.620e-87
Identity = 163/261 (62.45%), Postives = 201/261 (77.01%), Query Frame = 1
Query:   10 EELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGG-EDEANKRRWRVAAGK------KAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFAD 771
            EEL  KLE   R+ + ++ E  + +S+  R++Q     ED+  K +    A K      +   T+TIEQK +I +AEL+E+Q+EIEETKR+SE+LIDTLRAVLEET IRI+ELK DAYEFKRDIVVGAEN RTG+T+AEK+VRYMEDKLR +DA+IEKLRLKNATLK+Q QK++ QLRQKEEMGD LHYIDFHQLQIENKQ++AKIEERN+ELLKLK TTG  VQ LNNLK +L  L  ES +L  EI +R+E  EK+ A+
Sbjct:   11 EELEAKLEEALRQNELISHENELFDSFLKRNAQPSNASEDDEKKEKPDKQAAKNRQRRQRPQATITIEQKNDICSAELEEAQKEIEETKRSSERLIDTLRAVLEETDIRIAELKMDAYEFKRDIVVGAENFRTGKTIAEKMVRYMEDKLRAKDAIIEKLRLKNATLKSQAQKIDAQLRQKEEMGDALHYIDFHQLQIENKQYVAKIEERNDELLKLKQTTGNTVQLLNNLKQKLNDLIDESAWLRAEIQSRSELHEKVKAE 271          
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: K3WVN1_GLOUD (DUF4201 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVN1_GLOUD)

HSP 1 Score: 271 bits (692), Expect = 1.030e-86
Identity = 154/258 (59.69%), Postives = 202/258 (78.29%), Query Frame = 1
Query:   10 EELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWRVAAGK----KAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFAD 771
            +EL  KLE + R+ + +  E  +LESY +R++Q + G D+  KR  +    +    +A + LT++QK ++ + EL+ +Q+E+EET+R SE+L+DTLRAVLEET IRI+ELK+DAYEFKRDIVVGAEN RTG+T+AEK++RYME+KLRQ+DA++EKLRLKNATLK+Q QK++ QLR KEEMGD LHYIDFHQLQIENKQ++A IEERNE+LLKLK TTG  VQ LNNLK +L +L  ES +L  EI +RTE  EKI  +
Sbjct:    8 DELETKLEDLTRQNEIIKQENELLESYLHRNAQTLPGSDDDEKRDEKDKKSRQRRARAKMLLTMDQKNDLCSTELEAAQKELEETRRTSERLVDTLRAVLEETDIRIAELKKDAYEFKRDIVVGAENFRTGKTIAEKMIRYMEEKLRQKDAIVEKLRLKNATLKSQAQKIDAQLRHKEEMGDALHYIDFHQLQIENKQYVATIEERNEDLLKLKQTTGNTVQVLNNLKKRLHELLEESAWLQSEIQSRTELNEKIIEE 265          
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: A0A6G0XKV8_9STRA (DUF4201 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKV8_9STRA)

HSP 1 Score: 267 bits (683), Expect = 2.300e-85
Identity = 164/270 (60.74%), Postives = 200/270 (74.07%), Query Frame = 1
Query:    1 GEDE--ELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWRVAAGKKAPL------TLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFADNEAVA 786
            G+DE  EL  KLE   R+ + L  E  + ESY  R++Q     +E +K+                  T++IEQK  I +AEL+E+Q+E+EETKR SE+LIDTLRAVLEET IRISELK DAYEFKRDIVVGAEN RTG+T+AEK++RYMEDKLR +DA++EKLRLKNATLK+Q QK++ QLRQKEEMGD LHYIDFHQLQIENKQ++AKIEERN+ELLKLK TTG  VQ LNNLK +L  L  ES +L  EI +RT+  EK+ A+   VA
Sbjct:    8 GDDELEELEAKLEEAMRQNEQLAHENELFESYLKRNAQPNMVVEEEDKKXXXXXXXXXXXXXXXPQATISIEQKNAICSAELEEAQKEVEETKRTSERLIDTLRAVLEETDIRISELKMDAYEFKRDIVVGAENFRTGKTMAEKMIRYMEDKLRAKDAIVEKLRLKNATLKSQAQKIDAQLRQKEEMGDALHYIDFHQLQIENKQYVAKIEERNDELLKLKQTTGNTVQLLNNLKQKLNDLIDESAWLRAEIKSRTDLNEKVKAELVTVA 277          
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Match: A0A7S2FIF4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FIF4_9STRA)

HSP 1 Score: 266 bits (679), Expect = 2.970e-85
Identity = 148/223 (66.37%), Postives = 186/223 (83.41%), Query Frame = 1
Query:  121 EDEANKRRWRVAAGK-KAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDAMIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIAKIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQLEKIFADNEAVA 786
            E   +K R R   G+ K P  L IE KC+IAN++L++ Q+E++ETK++SEKLIDTL+AVLEET IRI+ELK+DAYEFKRDIVVGAENMRTG+T+AEKV +YMEDKL+ RD+MI+KL+LKN T+K QIQKVENQL+QKEEMGDVLHYIDFHQLQIENKQ++++IEERN+ELLKLKMTTG  VQ+LN+ K +L  L  ES +L +EI +RT+ L K+  DN  V+
Sbjct:    4 EGHDSKGRGRQKHGRSKLPQKLAIEYKCDIANSQLEQKQKEMDETKKHSEKLIDTLKAVLEETDIRIAELKKDAYEFKRDIVVGAENMRTGKTMAEKVQKYMEDKLKNRDSMIDKLKLKNVTIKAQIQKVENQLKQKEEMGDVLHYIDFHQLQIENKQYVSRIEERNDELLKLKMTTGATVQTLNSQKEKLSALQQESEWLQREIKSRTDLLAKVRDDNRQVS 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1148.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XQG1_HETAK7.000e-167100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
H3GA29_PHYRM4.580e-9060.00DUF4201 domain-containing protein n=19 Tax=Phytoph... [more]
A0A485KME4_9STRA1.110e-8963.50Aste57867_9115 protein n=1 Tax=Aphanomyces stellat... [more]
A0A8K1CQ56_PYTOL1.640e-8858.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RQ37_9STRA3.620e-8859.57DUF4201 domain-containing protein n=1 Tax=Phytopht... [more]
A0A836CMH5_9STRA5.990e-8762.25Flagellar associated protein n=1 Tax=Tribonema min... [more]
A0A1V9YA48_9STRA6.620e-8762.45DUF4201 domain-containing protein n=2 Tax=Saproleg... [more]
K3WVN1_GLOUD1.030e-8659.69DUF4201 domain-containing protein n=1 Tax=Globispo... [more]
A0A6G0XKV8_9STRA2.300e-8560.74DUF4201 domain-containing protein n=1 Tax=Aphanomy... [more]
A0A7S2FIF4_9STRA2.970e-8566.37Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1148contigH-akashiwo_Contig1148:84648..85593 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog164328.Phyra71957
PFAMsDUF4201
Model size819
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.51e-91
EggNOG OGs28MPJ@1|root,2QU7J@2759|Eukaryota,3QEU0@4776|Peronosporales
DescriptionDomain of unknown function (DUF4201)
Cds size819
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387097.608201-CDS-H-akashiwo_Contig1148:84647..853101681387097.608201-CDS-H-akashiwo_Contig1148:84647..85310Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 84648..85310 +
1681387097.6200442-CDS-H-akashiwo_Contig1148:85437..855931681387097.6200442-CDS-H-akashiwo_Contig1148:85437..85593Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 85438..85593 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1148.2.1prot_H-akashiwo_Contig1148.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1148 84648..85593 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1148.2.1

>prot_H-akashiwo_Contig1148.2.1 ID=prot_H-akashiwo_Contig1148.2.1|Name=mRNA_H-akashiwo_Contig1148.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=273bp
GEDEELLQKLERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWR
VAAGKKAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLE
ETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYMEDKLRQRDA
MIEKLRLKNATLKNQIQKVENQLRQKEEMGDVLHYIDFHQLQIENKQHIA
KIEERNEELLKLKMTTGKAVQSLNNLKNQLQKLTSESNYLNKEIAARTEQ
LEKIFADNEAVAQVHTKGSGRVQ
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mRNA from alignment at H-akashiwo_Contig1148:84648..85593+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1148.2.1 ID=mRNA_H-akashiwo_Contig1148.2.1|Name=mRNA_H-akashiwo_Contig1148.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=946bp|location=Sequence derived from alignment at H-akashiwo_Contig1148:84648..85593+ (Heterosigma akashiwo CCMP452)
GGGGAAGACGAAGAGCTTCTTCAAAAACTGGAGAGGGTTGAACGGGAAAT GGACTCTCTGAACATTGAAGTTGGTGTACTGGAGTCGTACTACAACAGAC ACAGCCAGGAGATGGGAGGTGAAGATGAGGCGAACAAAAGAAGGTGGAGG GTTGCTGCAGGCAAGAAAGCGCCCCTGACCCTTACTATCGAACAAAAGTG TGAGATAGCAAACGCAGAGTTGGACGAGTCCCAGCGAGAGATTGAGGAGA CCAAGAGAAACTCAGAAAAACTGATCGACACGCTCCGGGCAGTCCTAGAA GAAACCAGTATCCGGATTTCTGAGCTCAAACGGGATGCCTACGAGTTCAA GCGCGATATTGTTGTCGGTGCCGAGAACATGAGAACTGGCCGTACTGTGG CGGAAAAGGTAGTGCGCTACATGGAAGACAAGTTGCGCCAGAGAGATGCA ATGATTGAGAAGCTAAGACTCAAGAATGCAACATTGAAAAACCAAATCCA GAAGGTTGAAAACCAGCTACGGCAGAAGGAGGAGATGGGAGATGTGCTGC ACTATATCGACTTCCATCAGCTACAGATTGAGAACAAGCAGCACATCGCA AAGATAGAGGAGAGGAATGAAGAATTGCTGAAGCTGAAAATGACAACAGG CAAAGCTGTCCAGGTGCGGCTGACTACAGCACCATATATATTTTAATTTC CATTGATCCTGTGTCAAATTATGGACATCCAATCCACAATATTTATTTCA CACCCTATCGTCATGAAAAAAATGGATGGGCTGTTTTAAGTCCCTGAACA ATCTCAAGAACCAACTGCAGAAGCTGACTTCAGAGTCTAACTACTTGAAT AAAGAAATTGCTGCACGGACAGAGCAACTAGAGAAAATCTTTGCAGACAA CGAAGCAGTTGCCCAGGTGCACACAAAAGGGAGCGGAAGGGTTCAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1148:84648..85593+

>mRNA_H-akashiwo_Contig1148.2.1 ID=mRNA_H-akashiwo_Contig1148.2.1|Name=mRNA_H-akashiwo_Contig1148.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=819bp|location=Sequence derived from alignment at H-akashiwo_Contig1148:84648..85593+ (Heterosigma akashiwo CCMP452)
GGGGAAGACGAAGAGCTTCTTCAAAAACTGGAGAGGGTTGAACGGGAAAT
GGACTCTCTGAACATTGAAGTTGGTGTACTGGAGTCGTACTACAACAGAC
ACAGCCAGGAGATGGGAGGTGAAGATGAGGCGAACAAAAGAAGGTGGAGG
GTTGCTGCAGGCAAGAAAGCGCCCCTGACCCTTACTATCGAACAAAAGTG
TGAGATAGCAAACGCAGAGTTGGACGAGTCCCAGCGAGAGATTGAGGAGA
CCAAGAGAAACTCAGAAAAACTGATCGACACGCTCCGGGCAGTCCTAGAA
GAAACCAGTATCCGGATTTCTGAGCTCAAACGGGATGCCTACGAGTTCAA
GCGCGATATTGTTGTCGGTGCCGAGAACATGAGAACTGGCCGTACTGTGG
CGGAAAAGGTAGTGCGCTACATGGAAGACAAGTTGCGCCAGAGAGATGCA
ATGATTGAGAAGCTAAGACTCAAGAATGCAACATTGAAAAACCAAATCCA
GAAGGTTGAAAACCAGCTACGGCAGAAGGAGGAGATGGGAGATGTGCTGC
ACTATATCGACTTCCATCAGCTACAGATTGAGAACAAGCAGCACATCGCA
AAGATAGAGGAGAGGAATGAAGAATTGCTGAAGCTGAAAATGACAACAGG
CAAAGCTGTCCAGTCCCTGAACAATCTCAAGAACCAACTGCAGAAGCTGA
CTTCAGAGTCTAACTACTTGAATAAAGAAATTGCTGCACGGACAGAGCAA
CTAGAGAAAATCTTTGCAGACAACGAAGCAGTTGCCCAGGTGCACACAAA
AGGGAGCGGAAGGGTTCAG
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