mRNA_H-akashiwo_Contig1146.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1146.2.1
Unique NamemRNA_H-akashiwo_Contig1146.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: A0A2J7Q207_9NEOP (Reverse transcriptase domain-containing protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q207_9NEOP)

HSP 1 Score: 188 bits (477), Expect = 1.380e-51
Identity = 110/309 (35.60%), Postives = 172/309 (55.66%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGYPEEFVE 927
            +HK    +R I S++ S  + LA  L K+L P++G T ++V++  HF++ IQ       +  ++       +VS D+ ++F N+P+ E L+++  RLR        PER+ L  E+V+ L+       YFQ E   ++Q +G+ MG  LS ++S+IFME +EE   I +       A WLR+ DDT++IW    +EL  +FL+ +N I P IK+    E N  LPFLDVLV++       T+ VYRKPTH+ RYLH+ SNHP   K   + +L+ RA   C        ++ ++R     + YP+EFV+
Sbjct:  111 IHKPGIPLRPIISSIDSPCYALAEFLHKILNPLSGNTGSFVKNSEHFIKSIQD------INLQKEDC----LVSFDVVSLFTNVPVEEVLQIIRDRLRM---DSSFPERSPLQVEDVMELLDICLKTTYFQFEDTFYQQKEGMAMGNSLSPVVSNIFMEHFEE---IAIDTAEYKPAKWLRYVDDTFVIWPYGPEEL-QKFLQHINNIRPTIKFTMEVEVNNALPFLDVLVMKQGP--KLTTKVYRKPTHTGRYLHFKSNHPHHVKRGVVHSLINRAKVICQNKKDFSKEIRNIRHDLMLSEYPKEFVD 400          
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: UPI0018D89FB2 (uncharacterized protein LOC119736566 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D89FB2)

HSP 1 Score: 188 bits (478), Expect = 8.600e-51
Identity = 116/303 (38.28%), Postives = 167/303 (55.12%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGY 909
            +HK D  +R I S+ GS  ++LA  L+KLL P+ GKT  +V +   F+  I+            +      +VS D+ ++F N+P  EA  V +  L   E+ G L ERT L+ +++  L+     + YFQ     ++Q  G PMG P+S ++++IFMED+E+K    L+        WLR+ DDT++IW  H  +  D FL+ LN  HP I++    E +  LPFLDVL+ +  D GS   +VYRKPTH+DRYL+  S HP   K S  RTL+ RA H  S      ++L HL K   DNGY
Sbjct:  238 IHKPDKPLRPIVSSRGSPTYNLAQHLTKLLHPLVGKTPHHVPNSAGFINTIKG----------IKLQSADMLVSFDVKSLFTNVPTEEACLVTKSIL---EQDGTLTERTSLTPDQIYDLLLTCVKSTYFQWRDNYYQQASGTPMGSPISPVLANIFMEDFEQKT---LATAQFQPKLWLRYVDDTFIIWP-HGPDKLDGFLRHLNQQHPSIQFTMETETSDSLPFLDVLISKRAD-GSLGHSVYRKPTHTDRYLNARSFHPPSVKTSVNRTLLRRA-HIISDDEHLQSELKHLNKVLRDNGY 521          
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: UPI001E277682 (uncharacterized protein LOC123678684 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E277682)

HSP 1 Score: 187 bits (476), Expect = 9.090e-51
Identity = 111/311 (35.69%), Postives = 176/311 (56.59%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRAD-WLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGYPEEFVEV 930
            +HK++  +R I S+  S  H LA  L K++ P+ G T   V++  HF+E ++   ++ ++           MVS D+S++F N+P  + LE++ K+L   E+   L ERT LS   ++ ++       YFQ +   ++Q  G+ MG PLS +++DI+MED+E + +    D  V++   W R+ DDT++IW  H +E    FL+ LN I   IK+    EEN QLPFLDVLV + E  G   +T+YRKPT++ +YLH+ SNH +  KL   R L  RA   CS+ + K  +   + +    NGYP+  +E+
Sbjct:  230 IHKENIPLRPIVSSRNSPCHSLAKFLLKIISPLRGHTTAMVKNTEHFIETMR---TQEILNQ-------DTMVSFDVSSLFTNVPTDQTLEIVRKKL---EEDQTLAERTTLSINAIMDMLSVCIKTTYFQVDNIFYQQEFGMAMGSPLSPVLADIYMEDFEGRAL----DQYVLKPKLWRRYVDDTFVIWP-HGKETIAGFLEHLNNIEESIKFTMEIEENEQLPFLDVLVHKQE--GIPRTTIYRKPTNTGQYLHFESNHNLNTKLGVARCLYDRATQMCSSLNDKNEEFDKITEILEKNGYPKRILEI 520          
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: UPI001455459E (uncharacterized protein LOC117300272 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455459E)

HSP 1 Score: 179 bits (454), Expect = 3.960e-50
Identity = 110/303 (36.30%), Postives = 169/303 (55.78%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGY 909
            +HK D  +R I S+ GS  ++LA  L+KLL  + GKT  +V +   F+++I+            +   +  +VS D+ ++F N+P  EA ++ +  L   E+   L +RT L+ +++  L+     + YFQ   G ++Q    PMG P+S ++++IFMED+E+K    L    +    WLR+ DDT++IW  H  E  D+FL  +N  HP I++    E +  LPFLDVL+ + + DGS   +VYRKPTH+DRYL+  S HP   K S  RTL+ RA+  C    L   +L HL     +NGY
Sbjct:   35 IHKPDKPLRPIVSSRGSPTYNLAQHLTKLLHTLVGKTPHHVPNSAGFIDIIKG--------IELQSSDI--LVSFDVKSLFTNVPTDEACQITKAVL---EQDETLTDRTSLTPDQIHDLLMTCVKSTYFQWRDGYYRQALRTPMGSPISPVLANIFMEDFEQKA---LGTARLKPKLWLRYVDDTFIIWS-HGLENHDDFLSHINRQHPNIQFTMETETSDSLPFLDVLISK-KTDGSLAHSVYRKPTHTDRYLNARSFHPPSVKASVNRTLLQRAHIICDKEHLPN-ELEHLNTVLKENGY 318          
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: A0A2J7QJN5_9NEOP (Reverse transcriptase domain-containing protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QJN5_9NEOP)

HSP 1 Score: 185 bits (469), Expect = 6.170e-50
Identity = 105/309 (33.98%), Postives = 173/309 (55.99%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGYPEEFVE 927
            +HK    +R I S++GS  + LAA L K+L P+AG++ ++V++  HF+EL++       +  RR       + S D+ ++F N+P+ EAL+V+  RL        L ER+ L  E ++ L+       YFQ + G ++Q DG+ MG  LS ++S+I+ME +E+  +    D   +   WLR+ DDT++IW  H  E    FL  LN + P I++    E  G +PFLDVLV++     + T+ V+RKPTH+ RYL++ SNHP   K   + +L  RA   C     ++ ++  L++    +GY + F++
Sbjct:  190 IHKPGIPLRPIVSSIGSPCYALAAFLQKILSPLAGRSGSFVKNSGHFIELLKS------VNLRRHD----MLASFDVVSLFTNVPVDEALQVIRSRLSN---DNTLAERSVLKVEAIMELLDVCLRTTYFQGDDGFYQQKDGMAMGSSLSPVVSNIYMEHFEQLAIDSAQDKPSL---WLRYVDDTFVIWP-HGAEGIQNFLTHLNSLRPAIQFTMEIESEGTIPFLDVLVMKKGT--ALTTKVHRKPTHTGRYLNFNSNHPPHVKRGIVHSLHDRATTICQDRQDRVLEVKSLKRDLQLSGYSQGFID 479          
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: UPI001E276C2B (uncharacterized protein LOC123672141 n=2 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E276C2B)

HSP 1 Score: 184 bits (467), Expect = 2.820e-49
Identity = 110/311 (35.37%), Postives = 175/311 (56.27%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRAD-WLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGYPEEFVEV 930
            +HK++  +R I S+  S  H LA  L K++ P+ G T   V++   F+E ++   ++ ++           MVS D+S++F N+P  + LE++ K+L   E+   L ERT LS   ++ ++       YFQ +   ++Q  G+ MG PLS +++DI+MED+E + +    D  V++   W R+ DDT++IW  H +E    FL+ LN I   IK+    EEN QLPFLDVLV + E  G   +T+YRKPT++ +YLH+ SNH +  KL   R L  RA   CS+ + K  +   + +    NGYP+  +E+
Sbjct:  259 IHKENIPLRPIVSSRNSPCHSLAKFLLKIISPLRGHTTAMVKNTEPFIETMR---TQEILNQ-------DTMVSFDVSSLFTNVPTDQTLEIVRKKL---EEDQTLAERTTLSINAIMDMLSVCIKTTYFQVDNIFYQQEFGMAMGSPLSPVLADIYMEDFEGRAL----DQYVLKPKLWRRYVDDTFVIWP-HGKETITGFLEHLNNIEESIKFTMEIEENEQLPFLDVLVHKQE--GIPRTTIYRKPTNTGQYLHFESNHNLNTKLGVARCLYDRATQVCSSLNDKNEEFDKITEILEKNGYPKRILEI 549          
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: UPI001E1D74E4 (uncharacterized protein LOC123533404 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D74E4)

HSP 1 Score: 182 bits (463), Expect = 4.560e-49
Identity = 112/318 (35.22%), Postives = 182/318 (57.23%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCG----------HDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVG---RMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGYPE 915
             HKKD  +R I S+ GS            +D A  L+ ++ P+AGK+  ++ +  HFV+ IQ             G  V    ++VS D+SA+F +IP+ +ALEV+  RL   EK   L +R +L+ ++V  L++    + YF  +   ++Q  G  MG P+S ++++++ME +E + + +  +   +   W+R+ DDT  + K H  ++ D+F + LN I P IK+ +  EE+G++PFLD  +   EDDGS   TVYRKPTH+D+YL++ SNH ++ K S +RTL+ RAN   +  S K  ++ H++     NGYPE
Sbjct:  187 THKKDAPLRPIVSSNGSXXXXXXXXXXVMYDTAKYLASVIGPLAGKSQHHIINSVHFVQKIQ-------------GLEVPPGQKLVSYDVSALFTSIPVEKALEVIRMRL---EKDKNLNDRCELNVDQVSELLELCLTSTYFVYQGKYYQQKQGAAMGSPVSPIVANLYMEFFERQALDRAKNPQSL---WVRYVDDT--MTKIHEYDI-DQFTEHLNSIDPHIKFTSEQEEDGKIPFLDTCI-HVEDDGSTRVTVYRKPTHTDQYLNFNSNHHLEHKRSVVRTLLRRANTLVTNESDKKKEIEHVKTALRANGYPE 481          
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: A0A6J2XEP7_SITOR (uncharacterized protein LOC115877686 n=3 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2XEP7_SITOR)

HSP 1 Score: 180 bits (456), Expect = 5.460e-49
Identity = 107/310 (34.52%), Postives = 162/310 (52.26%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGYPEEFVEV 930
            +HK    +R I SA GS  ++LA  L+ +L P  G T++YV+D  HFV+ ++          +     +  MVS D+ ++F  +P+ E+++++++                    ++  L +      YF      ++Q +GV MG P+S +I++ FME +EEK    L    +  A W R+ DDT+++WK H ++  D+FL  LN   P IK+    E N QL FLDVLV RN D      TVYRKPTH+DRYLH  SNH    K   I TL  RA   C+   ++  +L+HL K F  NGY +  ++ 
Sbjct:   67 IHKASVPLRPIVSAPGSPTYNLAKYLTTILQPKVGNTNSYVKDSTHFVQKLKD--------IKLEPSDI--MVSFDVVSLFTRVPLGESMDLIKESF----------------PPDIAELFRVCLTGSYFLWNGNYYEQTEGVAMGSPISPIIANFFMERFEEKA---LESSVLKPAVWFRYVDDTFVVWK-HGRDSLDDFLHHLNSQSPSIKFTMETEVNNQLAFLDVLVKRNGD--LLDHTVYRKPTHTDRYLHKLSNHHPSQKQGIIGTLANRARRICANEHIQ-EELSHLNKAFLANGYNDREIKA 343          
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: A0A6J2X5T6_SITOR (uncharacterized protein LOC115875260 n=4 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2X5T6_SITOR)

HSP 1 Score: 180 bits (456), Expect = 3.190e-48
Identity = 107/310 (34.52%), Postives = 162/310 (52.26%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGYPEEFVEV 930
            +HK    +R I SA GS  ++LA  L+ +L P  G T++YV+D  HFV+ ++          +     +  MVS D+ ++F  +P+ E+++++++                    ++  L +      YF      ++Q +GV MG P+S +I++ FME +EEK    L    +  A W R+ DDT+++WK H ++  D+FL  LN   P IK+    E N QL FLDVLV RN D      TVYRKPTH+DRYLH  SNH    K   I TL  RA   C+   ++  +L+HL K F  NGY +  ++ 
Sbjct:  271 IHKASVPLRPIVSAPGSPTYNLAKYLTTILQPKVGNTNSYVKDSTHFVQKLKD--------IKLEPSDI--MVSFDVVSLFTRVPLGESMDLIKESF----------------PPDIAELFRVCLTGSYFLWNGNYYEQTEGVAMGSPISPIIANFFMERFEEKA---LESSVLKPAVWFRYVDDTFVVWK-HGRDSLDDFLHHLNSQSPSIKFTMETEVNNQLAFLDVLVKRNGD--LLDHTVYRKPTHTDRYLHKLSNHHPSQKQGIIGTLANRARRICANEHIQ-EELSHLNKAFLANGYNDREIKA 547          
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Match: A0A401QI04_SCYTO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401QI04_SCYTO)

HSP 1 Score: 178 bits (451), Expect = 5.070e-48
Identity = 98/309 (31.72%), Postives = 167/309 (54.05%), Query Frame = 1
Query:    1 VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVELIQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRFEKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLSCLISDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWKEHSQELFDEFLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTHSDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFADNGYPEEFVE 927
            +HK+    R I SA+GS  + LA  +++ L P   +  +Y+++  HF+++++          R    +   +VS D+ ++F  IP+ E ++++E++  R                 +  L K      YF+ +   ++Q +G  MG P+S   +++++  +EE+ +   +  T+    W R+ DDT++IW  H ++  +EFL  LN IHP IK+    EENGQ+PFLDVLV RN + G+ + TVYRK TH+DRYLH  S+H  K K   + TL +R+        L+  +L HL++  A NGY +  ++
Sbjct:  159 IHKEGTPYRPIVSAIGSPSYKLAKYVARELQPTVERAASYIKNSRHFIDMLK----------RITLNKTDLLVSFDVVSLFTKIPIQETIKIIEEQFDR----------------RLAELAKVCLTTTYFKFDGEFYQQKEGAAMGSPVSPAAANLYLSSFEEEAI---NSSTLKPTHWYRYIDDTFVIWP-HGRQKLEEFLGHLNSIHPNIKFTMEIEENGQIPFLDVLVKRNAE-GTLSHTVYRKTTHTDRYLHAESHHHPKQKRGILHTLAHRSKTISDKQHLR-EELQHLQQALASNGYTKTEIQ 435          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1146.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2J7Q207_9NEOP1.380e-5135.60Reverse transcriptase domain-containing protein n=... [more]
UPI0018D89FB28.600e-5138.28uncharacterized protein LOC119736566 n=1 Tax=Patir... [more]
UPI001E2776829.090e-5135.69uncharacterized protein LOC123678684 n=1 Tax=Harmo... [more]
UPI001455459E3.960e-5036.30uncharacterized protein LOC117300272 n=1 Tax=Aster... [more]
A0A2J7QJN5_9NEOP6.170e-5033.98Reverse transcriptase domain-containing protein n=... [more]
UPI001E276C2B2.820e-4935.37uncharacterized protein LOC123672141 n=2 Tax=Harmo... [more]
UPI001E1D74E44.560e-4935.22uncharacterized protein LOC123533404 n=1 Tax=Merce... [more]
A0A6J2XEP7_SITOR5.460e-4934.52uncharacterized protein LOC115877686 n=3 Tax=Sitop... [more]
A0A6J2X5T6_SITOR3.190e-4834.52uncharacterized protein LOC115875260 n=4 Tax=Sitop... [more]
A0A401QI04_SCYTO5.070e-4831.72Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1146contigH-akashiwo_Contig1146:54295..55227 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog28377.ENSACAP00000021976
PFAMsRVT_1
Model size933
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.7e-46
EggNOG OGs2CN36@1|root,2QTNN@2759|Eukaryota,38FJC@33154|Opisthokonta,3BM27@33208|Metazoa,3D0HQ@33213|Bilateria,48H4M@7711|Chordata,49D09@7742|Vertebrata
Cds size933
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387097.1890838-CDS-H-akashiwo_Contig1146:54294..552271681387097.1890838-CDS-H-akashiwo_Contig1146:54294..55227Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1146 54295..55227 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1146.2.1prot_H-akashiwo_Contig1146.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1146 54295..55227 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1146.2.1

>prot_H-akashiwo_Contig1146.2.1 ID=prot_H-akashiwo_Contig1146.2.1|Name=mRNA_H-akashiwo_Contig1146.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=311bp
VHKKDWAVREISSALGSCGHDLAAVLSKLLMPMAGKTHTYVRDGYHFVEL
IQQRWSRFVMTARRRGGRVGRMVSLDISAMFPNIPMAEALEVLEKRLRRF
EKSGELPERTDLSAEEVILLVKEVCAAPYFQCEFGLFKQVDGVPMGGPLS
CLISDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWKEHSQELFDE
FLKKLNGIHPKIKWEAVFEENGQLPFLDVLVVRNEDDGSFTSTVYRKPTH
SDRYLHWTSNHPVKDKLSGIRTLVYRANHYCSTTSLKMADLAHLRKTFAD
NGYPEEFVEV*
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mRNA from alignment at H-akashiwo_Contig1146:54295..55227-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1146.2.1 ID=mRNA_H-akashiwo_Contig1146.2.1|Name=mRNA_H-akashiwo_Contig1146.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=933bp|location=Sequence derived from alignment at H-akashiwo_Contig1146:54295..55227- (Heterosigma akashiwo CCMP452)
GTGCACAAGAAGGACTGGGCTGTGCGGGAGATCTCTAGTGCGTTGGGCAG CTGTGGTCATGATCTGGCGGCGGTCCTCAGTAAGCTGTTGATGCCTATGG CTGGGAAGACACATACTTATGTCCGTGATGGGTACCATTTTGTTGAATTG ATTCAGCAGAGGTGGTCAAGGTTTGTTATGACGGCCCGGCGGCGTGGTGG ACGTGTTGGCCGGATGGTGAGCCTGGACATCAGTGCTATGTTTCCCAATA TTCCTATGGCCGAGGCTTTGGAGGTGCTGGAGAAGCGGCTTAGGCGGTTT GAGAAGTCTGGCGAGTTGCCCGAGCGTACTGACCTTTCAGCAGAGGAGGT GATACTGCTGGTGAAGGAGGTGTGTGCGGCCCCTTACTTTCAATGCGAGT TTGGCTTGTTCAAGCAGGTGGACGGCGTGCCTATGGGTGGCCCTTTGTCC TGCCTCATCTCTGATATCTTCATGGAGGATTATGAGGAGAAGGTCGTCAT TAAACTGTCTGATGGGACAGTGATCAGGGCTGACTGGCTCAGGTTCCGTG ATGACACCTGGATGATCTGGAAGGAGCACTCTCAGGAGCTTTTTGATGAG TTTTTGAAGAAGCTCAATGGCATACACCCAAAGATCAAGTGGGAGGCAGT ATTTGAGGAAAATGGGCAGTTGCCTTTTCTGGACGTGTTGGTGGTGAGAA ATGAGGATGATGGCTCTTTTACTAGCACGGTCTACCGGAAACCCACGCAC TCTGACAGGTATCTCCATTGGACTTCCAACCATCCTGTGAAGGACAAGCT TTCTGGTATCAGAACTTTGGTCTATCGTGCTAACCACTACTGCTCTACGA CGAGCCTGAAGATGGCGGATTTGGCCCATTTGAGGAAGACTTTTGCTGAC AACGGGTATCCGGAGGAGTTCGTGGAGGTATAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1146:54295..55227-

>mRNA_H-akashiwo_Contig1146.2.1 ID=mRNA_H-akashiwo_Contig1146.2.1|Name=mRNA_H-akashiwo_Contig1146.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=933bp|location=Sequence derived from alignment at H-akashiwo_Contig1146:54295..55227- (Heterosigma akashiwo CCMP452)
GTGCACAAGAAGGACTGGGCTGTGCGGGAGATCTCTAGTGCGTTGGGCAG
CTGTGGTCATGATCTGGCGGCGGTCCTCAGTAAGCTGTTGATGCCTATGG
CTGGGAAGACACATACTTATGTCCGTGATGGGTACCATTTTGTTGAATTG
ATTCAGCAGAGGTGGTCAAGGTTTGTTATGACGGCCCGGCGGCGTGGTGG
ACGTGTTGGCCGGATGGTGAGCCTGGACATCAGTGCTATGTTTCCCAATA
TTCCTATGGCCGAGGCTTTGGAGGTGCTGGAGAAGCGGCTTAGGCGGTTT
GAGAAGTCTGGCGAGTTGCCCGAGCGTACTGACCTTTCAGCAGAGGAGGT
GATACTGCTGGTGAAGGAGGTGTGTGCGGCCCCTTACTTTCAATGCGAGT
TTGGCTTGTTCAAGCAGGTGGACGGCGTGCCTATGGGTGGCCCTTTGTCC
TGCCTCATCTCTGATATCTTCATGGAGGATTATGAGGAGAAGGTCGTCAT
TAAACTGTCTGATGGGACAGTGATCAGGGCTGACTGGCTCAGGTTCCGTG
ATGACACCTGGATGATCTGGAAGGAGCACTCTCAGGAGCTTTTTGATGAG
TTTTTGAAGAAGCTCAATGGCATACACCCAAAGATCAAGTGGGAGGCAGT
ATTTGAGGAAAATGGGCAGTTGCCTTTTCTGGACGTGTTGGTGGTGAGAA
ATGAGGATGATGGCTCTTTTACTAGCACGGTCTACCGGAAACCCACGCAC
TCTGACAGGTATCTCCATTGGACTTCCAACCATCCTGTGAAGGACAAGCT
TTCTGGTATCAGAACTTTGGTCTATCGTGCTAACCACTACTGCTCTACGA
CGAGCCTGAAGATGGCGGATTTGGCCCATTTGAGGAAGACTTTTGCTGAC
AACGGGTATCCGGAGGAGTTCGTGGAGGTATAG
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