mRNA_H-akashiwo_Contig1133.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: A0A7S2XQV2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQV2_9STRA) HSP 1 Score: 238 bits (608), Expect = 2.740e-73 Identity = 134/281 (47.69%), Postives = 168/281 (59.79%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGEERGQNVIVKHWPGTDVQGDAYVDCAR--VNARRGRARWLAFIDTDEFLVLKKHANVIEFLQQHCESGALSVNWFIFGPNGRRVYQPLPVTLRFVYRHPGVNQHVKSFVNIQDLPFNQSGFGIQPH-FPWLLKPGTQQKDTNGATFHGPFNPGGPTDVAVIHHYWTKSMKEFSYKSCVRG----SINPAAMKYILCNATVP--------QNDKVY---DPSAWDFLKDNVPEYAFFEEL 789
+CSI ++EAYIDEWVDY+ A+GF ++YDNS+ EM+QWG E+G V V H+PG Q AY DC + G W AF D DEFLV+KKH +V +FL+ HC +GA++VNWF FG + R VY PLPVT RF+YR P VNQHVKS V + DL N PH P LK G+Q D+NG F GPFNP GP DV +HH+ TKS KE+ +K +RG S M L A V +ND Y D +AW +K NV A F+E+
Sbjct: 63 MCSIVKNEEAYIDEWVDYHHALGFDLFYIYDNSDGFEMKQWGNEKGDYVRVIHFPGVSKQMLAYNDCGKRLQEGGNGHHTWAAFFDVDEFLVIKKHEHVSDFLEDHCVNGAITVNWFFFGESSRIVYTPLPVTKRFIYREPSVNQHVKSIVRLTDL--NMEIHIKNPHHIP--LKSGSQH-DSNGMNFIGPFNPNGPIDVVALHHFHTKSYKEYIHKR-LRGRATMSWEKGDMDASLKRAKVAFEKALAGEENDGTYTFFDETAWTLMKKNVLYMALFDEI 337
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: A0A7S1D0L1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0L1_CYCTE) HSP 1 Score: 214 bits (545), Expect = 1.630e-64 Identity = 110/219 (50.23%), Postives = 143/219 (65.30%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGEERGQNVIVKHWPGTDVQGDAYVDCARVNARRGRARWLAFIDTDEFLVLKKHANVIEFLQQHCESGALSVNWFIFGPNGRRVYQPLPVTLRFVYR-----HPGVNQHVKSFVNIQDLPFNQSGFGIQPHFPWLLKPGTQQKDTNGATFHGPFNPGGPTDVAVIHHYWTKSMKEFSYK 642
+C IA D+E YIDEWVDY+LA+GF++I VYDN++ E+ QWGEE+G V V + G Q +AY+DCA + +W AF D DEFL+L +H ++ FL+++ + GAL +NW +FG GR VY P PVT RF +R HP N+HVKS N++D+ N + I+ H+P L G Q DTNG TF G FN GPTDVAVIHHY KS KEF K
Sbjct: 69 LCCIAKDEEPYIDEWVDYHLALGFNKIIVYDNADLGELLQWGEEKGPLVEVVPFAGVAKQKEAYLDCATKLISQHEFKWAAFFDVDEFLILNQHNHIGAFLEKYLKEGALGINWRVFGTGGRSVYSPAPVTKRFQFRFEDGYHP--NRHVKSIANLRDINLNAT-VPIRCHYP-ELNAGKSQFDTNGHTFVGAFNNNGPTDVAVIHHYHRKSAKEFLKK 283
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: A0A7S3LGE3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGE3_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.240e-57 Identity = 108/269 (40.15%), Postives = 150/269 (55.76%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGEERGQNVIVKHWPGTDVQGDAYVDCARVNARRGRARWLAFIDTDEFLVLKKHANVIEFLQQHCESGALSVNWFIFGPNGRRVYQPLPVTLRFVYRHPGVNQHVKSFVNIQDLPFNQSGFGIQPHFPWLLKPGTQQKDTNGATFHGPFNPGGPTDVAVIHHYWTKSMKEFSYKSCVRG------SINPAAMKYILCNATVPQNDKVYDPSAWDFLKDNVPEYAFFEEL 789
+C I ++E YIDE+VDY+ A+GF ++YDNS+ +RQWG E+G +V V +PG Q A+ C+ + A W+AF DTDE LVLKKH NV FL++HC SGAL +NW +FG R Y P P T RF +R +K+ + D+ +Q I H+P+L KPG Q DTNG F GP NP P D AV+HHY KS +E+ KS VRG + + + +D +AW +K+ VP Y ++ +
Sbjct: 108 MCMIVKEEEPYIDEFVDYHHALGFDAFYIYDNSDNYVLRQWGYEKGCHVTVVPFPGVAQQWTAFHTCSTM-ALHNNHTWVAFFDTDEILVLKKHRNVHSFLEEHCSSGALGINWLVFGTAERLAYSPQPFTKRFRFRKRKPEPMIKTIARLSDIDLSQGTLKI--HYPFL-KPGFSQHDTNGRNFSGPSNPFTPIDQAVLHHYKYKSYQEYVEKS-VRGRATYDREAGKVEQQVEQARRGMVPAARWFDDTAWMKMKEYVPRYVAYDVI 371
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: K0TAV6_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAV6_THAOC) HSP 1 Score: 192 bits (488), Expect = 9.460e-56 Identity = 109/272 (40.07%), Postives = 156/272 (57.35%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGEER---GQNVIVKHWPGTDVQGDAYVDCARVNARRGRARWLAFIDTDEFLVLKKHANVIEFLQQHCESGALSVNWFIFGPNGRRVYQPLPVTLRFVYRHPGVNQHV--KSFVNIQDLPFNQSGFGIQPHFPWLLKP--GTQQKDTNGATFH--GPFNPGGPTDVAVIHHYWTKSMKEFSYKSCVRGSINPAAMKYILCNATVPQNDKVYDPSAWDFLKDNVPEYAFFEEL 789
+C I D E Y+DEWVDY+ +GFH I++ DNS+ +E+ W ++R G +V V PG+ Q Y CA + + ++AF+D DEFLVLK+H + + L H + G+L+++W++FG Y PLPVT RF +R GV +H K++ N++ + S +G P P +K GT + T G +F G N PTDVAVIHHY S KEF +KSC+R +++ + AT Q +V D SAW LK NVP YA F+E
Sbjct: 51 LCGIVKDSEPYLDEWVDYHFGLGFHTIYLIDNSKDHELLTWQDKRRKAGYSVRVMPKPGSHRQMYGYHMCAAEH--KDEHTYMAFMDVDEFLVLKRHETIDQMLADHLQEGSLAISWYVFGSGKTATYAPLPVTKRFTFRD-GVEKHDRHKAWANVKSI-MKTSDYGGYPQSPHSMKTKRGTWKDTTGGGSFDKIGAENYARPTDVAVIHHYKYLSPKEFQWKSCIRQTVDAKLKDCVGGKATAYQG-RVPDDSAWQLLKKNVPRYAMFDEF 317
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: A0A7S1UMS1_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UMS1_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.310e-54 Identity = 107/271 (39.48%), Postives = 155/271 (57.20%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGE---ERGQNVIVKHWPGTD---VQGDAYVDCARVNARRGRARWLAFIDTDEFLVLKKHANVIEFLQQHC-ESGALSVNWFIFGPNGRRVYQPLPVTLRFVYRHPGVNQHVKSFVNIQDLPFNQSGFGIQPHFPWLLKPGTQQKDTNGATFH--GPFNPGGPTDVAVIHHYWTKSMKEFSYKSCVRGSINPAAMKYILCNATVPQNDKVYDPSAWDFLKDNVPEYAFFEE 786
IC+I D E +IDEW+DYN A+GFH I++YDN+ N+ R+WG+ E G+N+ V H+P + Q +AY CA + + + ++AFID DEFLVLKKH ++ E + +H + GAL+++W FG + + Y +P T RF+YR + VKS V +D QS H ++ T Q T G + G +N P DVAV +HY KS KE+ YK CVR ++ A M + C P+ YD +AW L+ VP+Y F+E
Sbjct: 88 ICAIIKDSETFIDEWIDYNFAVGFHAIYIYDNTPRNDFREWGQKQYEAGRNLQVIHFPEENNNLTQKNAYNGCA--HRFKNESDYIAFIDDDEFLVLKKHRDISELIAEHLPDGGALTISWRRFGSSNKTQYSTVPTTRRFMYRELRTHIRVKSIVKSEDFIEMQSA-----HSVFVKNNKTIQDTTGGGDYDWDGAYNRNRPDDVAVFNHYKFKSDKEWWYKECVRQTVLGAGMSWQGCGEP-PKVGVTYDDAAWKILRARVPKYRVFDE 350
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: A0A7S1Y9V9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9V9_9STRA) HSP 1 Score: 186 bits (472), Expect = 4.510e-53 Identity = 107/273 (39.19%), Postives = 156/273 (57.14%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGE---ERGQNVIV-KHW--PGTDVQGDAYVDCARVNARRGRARWLAFIDTDEFLVLKKHANVIEFLQQHC--ESGALSVNWFIFGPNGRRVYQPLPVTLRFVYRHPGVNQHVKSFVNIQDLPFNQSGFGIQPHFPWLLKPGTQQKDTNGATFHG---PFNPGGPTDVAVIHHYWTKSMKEFSYKSCVRGSINPAAMKYILCNATVPQNDKVYDPSAWDFLKDNVPEYAFFEE 786
+C+I D EAYIDEWVDYN AIGFH +++YDNS N+++ WG+ E G+NV+V H P D Q AY C V + ++AF+D DE+L+LKKHA+V FL++H E G L+VNW FG + +Y P+PVT R++ R + VK + ++D +S PH W+ KPG +DT+G + +N DVAV++HY KS KE+ YK CVR ++ C + ++D +AW L+ VP+Y ++E
Sbjct: 81 VCAIIRDAEAYIDEWVDYNFAIGFHAMYIYDNSPNNDLKSWGQKVREEGKNVVVVPHGMAPANDTQDLAYNGC--VERFGNESDYIAFVDDDEYLLLKKHADVSAFLREHLAQEGGCLTVNWARFGTSNHSLYAPIPVTRRYMLREWKTHYRVKCIITVKDFDKMRS-----PHAVWM-KPGVPYRDTSGGGTYDHEDDWNMDRTDDVAVLNHYKWKSEKEWWYKECVRKTVLGDEKS---CGED-SREGTIFDDAAWKVLRSRVPKYRAYDE 341
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: A0A813IJ16_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IJ16_POLGL) HSP 1 Score: 184 bits (466), Expect = 5.300e-52 Identity = 105/269 (39.03%), Postives = 142/269 (52.79%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGEER---GQNVIVKHWPGTDVQGDAYVDCARVNARRGRAR---WLAFIDTDEFLVLKKHANVIEFLQQHCESGALSVNWFIFGPNGRRVYQPLPVTLRFVYRHPGVNQHVKSFVNIQDLPFNQSGFGIQPHFPWLLKPGTQQKDTNGATFHGPFNPGGPTDVAVIHHYWTKSMKEFSYKSCV-RGSINPAAMKYILCNATVPQNDKVYDPSAWDFLKDNVPEYAFFEE 786
IC +A ++ YIDEW DY ++GF I+VYDNSE + W ER G ++ + + G V A+ DC ++++ R WLAF D DEFL + + GA+ +NW FG +GR YQPLPVT RF +R VNQH KS V I G + PH ++LK G + DT G F GPFN GP+DVAV+HHY+ KS E++ K R K T +V D SAW+FLK VP+Y +++
Sbjct: 103 ICMVARFEDIYIDEWADYQFSLGFETIYVYDNSENTSLFYWASERRKRGDDIELVPFKGVAVVTKAFDDCMYQSSKQSNLRNHSWLAFFDGDEFLATAPEGSNV---------GAVGINWLFFGTSGRDFYQPLPVTKRFQHREEDVNQHTKSIVRI-----TVGGPCMDPH-QFILKDGAVKVDTAGKHFSGPFNINGPSDVAVLHHYYWKSQAEWAQKFATPRNDNGELRQKRFPFYPTESSAGQVLDTSAWEFLKKAVPKYNIYDD 356
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: A0A7S1D271_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D271_CYCTE) HSP 1 Score: 176 bits (447), Expect = 1.510e-50 Identity = 90/188 (47.87%), Postives = 121/188 (64.36%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGEERGQNVIVKHWPGTDVQGDAYVDCARVNARRGRARWLAFIDTDEFLVLKKHANVIEFLQQHCESGALSVNWFIFGPNGRRVYQPLPVTLRFVYRHPG---VNQHVKSFVNIQDLPFNQSGFGIQPHFPWLLKPGTQQKDTNGATF 555
+C IA D+E YIDEWVDY+LA+GF++I VYDNS+ E+ QWG+E+G NV V G Q +AY DCA + +W AF D DEFL+LK+H V L+++ + GAL +NW +FG +GR VY P PVT RF+ R N+HVKS +N++D+ N + I+ H+P L G Q DTNG TF
Sbjct: 60 LCCIAKDEEPYIDEWVDYHLALGFNKIIVYDNSDLEELSQWGKEKGPNVEVVPLAGVAKQIEAYRDCALKLLHQNEFKWAAFFDVDEFLILKQHHYVGSLLERYLKEGALGINWRVFGTSGRLVYSPAPVTKRFLLRFKDNSVTNRHVKSIINLEDINLNAT-VPIRCHYPELYS-GKSQIDTNGHTF 245
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: A0A6C0DV42_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DV42_9ZZZZ) HSP 1 Score: 177 bits (449), Expect = 3.410e-50 Identity = 97/256 (37.89%), Postives = 147/256 (57.42%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGEERGQNVIVKHWPGTDVQGDAYVDCARVNARRGRARWLAFIDTDEFLVLKKHANVIEFLQQHCESGALSVNWFIFGPNGRRVYQPLPVTLRFVYRHPGVNQHVKSFVNIQDLPFNQSGFGIQPHFPWLLKPGTQQKDTNGATFHGPFNPGGPTDVAVIHHYWTKSMKEFSYKSCVRGSINPAAMKYI--LCNATVPQNDKVYDPSAWDFLKDNV 762
IC IAL++E YIDEW+ Y+LA+GF+ I++YDNS ++ +++ V V H+PG Q +AY C + + + +W AFID DEF+VLKKH+N+ EFL+ + ++ +NW +FG + ++Y+ PVT RF Y + ++ H+KS + + + PH+P LLK DT+ GPFN G ++A IHHY+TKS +EF K RG + K + L ND VY+ AWDF ++
Sbjct: 58 ICCIALNEEPYIDEWIKYHLALGFNHIYIYDNSNNYILK---DKQTDKVTVIHFPGITKQIEAYNLC--IAQYKNKHKWCAFIDCDEFIVLKKHSNINEFLKDYNSHDSIGLNWKMFGTSNEKIYRDEPVTSRFKYCNKNIDIHIKSISKLSSI-----NIYVSPHYPVLLK--GNNYDTHSNIITGPFNDKGSDEIACIHHYYTKSEEEF-LKKINRGRADITEKKSVEELTEIHFKNND-VYNSDAWDFYSKHL 299
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Match: B8BZI7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZI7_THAPS) HSP 1 Score: 177 bits (448), Expect = 8.600e-49 Identity = 108/298 (36.24%), Postives = 159/298 (53.36%), Query Frame = 1
Query: 1 ICSIALDDEAYIDEWVDYNLAIGFHEIHVYDNSEANEMRQWGEER---GQNVIVKHWPGTDVQGDAYVDCAR-------VNARRGRARWLAFIDTDEFLVLKKHANVIEFLQQHCESGALSVNWFIFGPNGRRVYQPLPVTLRFVYR--HPGVNQH-----VKSFVNIQDLPFNQSGFGIQPHFPWLLKPGTQQK-------DTNGATFHGPFNPGG------PTDVAVIHHYWTKSMKEFSYKSCVRGSINPAAMKYILCNATVPQN-----DKVYDPSAWDFLKDNVPEYAFFEEL 789
+C I D E Y+DEW+DY+ +G H I++ DNS+ +E++ W ++R G +V V PG+ Q Y CA A R+ ++AF D DEFLVLK H+ + L+ H + G+L+++W+IFG G +Y PLPVT+RF+YR H ++H VKS V + D +G P P +K + DTNG G F+ G P D+AV+HHY S KEF +KSC+R +++ K C+ + + VYD SAW LK NVP+YA +++
Sbjct: 127 LCGIVKDAEPYLDEWIDYHFGLGVHTIYLIDNSKHHELKSWQDKRRAAGHSVRVLPKPGSHRQMYGYHMCAAEFKDAHSALAVSFRSTYMAFFDVDEFLVLKNHSTIDAMLKDHLQKGSLAISWYIFGSGGTSLYAPLPVTMRFLYRDGHSEADRHDVWHNVKSIVKLSD-------YGGYPKSPHSIKTNKRTAGSDKAWVDTNGK---GKFDDIGASNFDRPVDIAVLHHYKFLSPKEFYWKSCIRKTVDD---KLKDCDDKLKRGVSHFVGSVYDDSAWQTLKRNVPQYAMYDQF 411 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1133.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1133.1.1 >prot_H-akashiwo_Contig1133.1.1 ID=prot_H-akashiwo_Contig1133.1.1|Name=mRNA_H-akashiwo_Contig1133.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=242bp MRQWGEERGQNVIVKHWPGTDVQGDAYVDCARVNARRGRARWLAFIDTDEback to top mRNA from alignment at H-akashiwo_Contig1133:154448..155372+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1133.1.1 ID=mRNA_H-akashiwo_Contig1133.1.1|Name=mRNA_H-akashiwo_Contig1133.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=925bp|location=Sequence derived from alignment at H-akashiwo_Contig1133:154448..155372+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1133:154448..155372+ >mRNA_H-akashiwo_Contig1133.1.1 ID=mRNA_H-akashiwo_Contig1133.1.1|Name=mRNA_H-akashiwo_Contig1133.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=726bp|location=Sequence derived from alignment at H-akashiwo_Contig1133:154448..155372+ (Heterosigma akashiwo CCMP452)back to top |