mRNA_H-akashiwo_Contig1130.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1130.2.1
Unique NamemRNA_H-akashiwo_Contig1130.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: A0A6V1PFD7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PFD7_HETAK)

HSP 1 Score: 541 bits (1393), Expect = 1.640e-185
Identity = 283/302 (93.71%), Postives = 287/302 (95.03%), Query Frame = 3 
Query:  717 EAEVQSGF-YNSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPEGDEAGM 1619
            + EVQSGF Y+SA    RM    R  +   +VKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPEGDEAGM
Sbjct:  242 KTEVQSGFFYSSAEQRERMVEAERKFTDD-KVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPEGDEAGM 542
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: A0A7S2V196_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V196_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 2.970e-133
Identity = 218/304 (71.71%), Postives = 251/304 (82.57%), Query Frame = 3 
Query:  717 EAEVQSGF-YNSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRD-NGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPE---GDEA 1613
            + EV SGF Y+SA    ++    R  +   +VK VIEFKR+VCK GESFV+INQKGIDPLSLDMFAKEGI A+RRAKRRNMERLTLACGG  VNCV+D+T D+LG+A +V+E TLGE+K+TFVE V NP+SCTIL+KGPN+HTI QV+DA+RDGLRAVKN +EDG  VPG GA EVAAAADL  Y  A V+G+AKLG+ A+ADALLV+PKTLAENSG DVQD+LI++QD  R   GGA  VGLDL+TGEPM PDQEGIWDNYRVKRQFLHLSTVLA+QLLLVDEVMRAG  MGKQPE   G EA
Sbjct:  243 KTEVSSGFFYSSAEQREKLVESERKFTDE-KVKVVIEFKRSVCKEGESFVIINQKGIDPLSLDMFAKEGIFALRRAKRRNMERLTLACGGMAVNCVDDLTPDVLGWADEVYEQTLGEDKFTFVEGVRNPRSCTILVKGPNEHTINQVKDAVRDGLRAVKNAVEDGHAVPGGGALEVAAAADLFEYKHA-VEGKAKLGIQAFADALLVIPKTLAENSGFDVQDSLIKVQDEQRKAGGGAVAVGLDLMTGEPMLPDQEGIWDNYRVKRQFLHLSTVLASQLLLVDEVMRAGKAMGKQPEPGMGQEA 544
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: D8LIP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP0_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 4.290e-124
Identity = 202/302 (66.89%), Postives = 246/302 (81.46%), Query Frame = 3 
Query:  717 EAEVQSGF-YNSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPEGDEAGM 1619
            + EVQSGF Y++A+   ++    R  +   +V  VIEFKR VCK GESFV+INQKGIDPLSLDMFAKEGI A+RRAKRRNMERLTLACGG  VN  ED++E+MLG+AG+V E TLG++K+TFVEDV +P+SCTIL+KGPN HTI Q++DA+RDGLRAVKN ++D AVVPGAGAFEVAA   LQ +    VKGRAKLG+ A+A+AL++VPKTLAENSG DVQD++I++ D   ++G A  VGLDL+TGEPM P+QEG+WDNY VKRQ LHLSTVLA+QLLLVDEVM+AG QMG+ P G   GM
Sbjct:  245 KTEVQSGFFYSTAQEREKLVESERKFTDE-KVMQVIEFKRKVCKEGESFVIINQKGIDPLSLDMFAKEGIFALRRAKRRNMERLTLACGGMAVNSTEDISEEMLGWAGQVHEETLGDDKFTFVEDVRHPRSCTILVKGPNDHTIAQIKDAIRDGLRAVKNTIDDQAVVPGAGAFEVAANLSLQKFKTT-VKGRAKLGIEAFAEALMIVPKTLAENSGFDVQDSVIKLVDEHVESGAA--VGLDLMTGEPMLPEQEGVWDNYCVKRQSLHLSTVLASQLLLVDEVMKAGKQMGQAPPGGPGGM 542
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: A0A6S8ZRG3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZRG3_9STRA)

HSP 1 Score: 373 bits (958), Expect = 4.130e-122
Identity = 196/301 (65.12%), Postives = 238/301 (79.07%), Query Frame = 3 
Query:  723 EVQSGF-YNSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQP-EGDEAGM 1619
            EVQSGF Y +A    ++    R      + K V++FKR VCK GESFV+INQKGIDPLSLD+FAKEGI+ +RRAKRRNMER+TLACGG P++ VED+ E  LG+A KV E TLGE+K+TFVE+  +P+SCT+L++GPN HTI Q+QDA+RDGLRAVKN +ED AVVPGAGAFE+AAA +L+   A E +GRAKLGV AYA+ALL+VPKTLAENSGLDVQD+++++ D    +GG   +GLD  +GEPM P  EGIWDN RVKRQ L+LSTVLA QLLLVDEVMRAG QMG+QP E D  GM
Sbjct:   83 EVQSGFFYKTADEREKLVESERKWLDE-RCKQVVDFKRRVCKDGESFVMINQKGIDPLSLDIFAKEGILCLRRAKRRNMERMTLACGGSPIHSVEDLDESQLGWANKVSEVTLGEDKFTFVEECKHPKSCTLLLQGPNTHTIAQIQDAVRDGLRAVKNAIEDAAVVPGAGAFELAAAMNLKDKVAKETRGRAKLGVEAYAEALLIVPKTLAENSGLDVQDSILRLVDERDASGGTMAIGLDCQSGEPMIPADEGIWDNVRVKRQCLYLSTVLANQLLLVDEVMRAGKQMGRQPPEDDGMGM 382
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: A0A4D9CV25_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV25_9STRA)

HSP 1 Score: 379 bits (972), Expect = 4.770e-122
Identity = 204/297 (68.69%), Postives = 241/297 (81.14%), Query Frame = 3 
Query:  717 EAEVQSGF-YNSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPEG 1604
            ++EV SGF Y++A    R+ +  R  +   +V+ VI+FKR VCK GESFVVINQKGIDPLSLDMFAKEGI+A+RRAKRRNMERLTLACGG P+N VED++EDMLG+AG+V+E TLGEEKYTFVEDV + +SCTILIKGPNQHTI Q++DALRDGLRAVKN +ED A+VPG G+FEVAA+  LQAY    V G+ KLGV A+A+ALLVVPKTLAENSG DVQD LI + +     G A  VGLD+ TGE MAP   G+WDNYRVKRQ LHL+T+LATQLL+VDEVMRAG QMG+ P G
Sbjct:  244 KSEVASGFFYSNAEERERLVASERRFTDE-KVRQVIDFKRKVCKEGESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQAYKET-VSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIA--VGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGRVPGG 536
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: A0A7S2PA84_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PA84_9STRA)

HSP 1 Score: 372 bits (956), Expect = 1.050e-120
Identity = 192/298 (64.43%), Postives = 236/298 (79.19%), Query Frame = 3 
Query:  717 EAEVQSGFY--NSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPEG 1604
            + EVQSGF+  N+    + + S  + L    + +AV++FKR+VCK GESFV+INQKGIDPLSLD+FAKEGI+ +RRAKRRNMERLTLACGG P++ VED+   MLG+AGKV E TLGE+K+TFVE+  +P+SCT+L++GPN HTI Q++DA+RDGLRAVKN +ED AVVPGAGAFE+AAA  L+       KGRAKLGV AYA+ALLV+PKTLAENSG DVQD ++ + DA  D+     VGLD  +G+PM P  EG+WDN RVKRQ LHLSTVLA+QLLLVDEVMRAG QMG+ PEG
Sbjct:  164 KTEVQSGFFYSNADEREKLVESERKWLDE--RCRAVVDFKRSVCKEGESFVMINQKGIDPLSLDIFAKEGILCLRRAKRRNMERLTLACGGSPIHSVEDLDATMLGFAGKVSEVTLGEDKFTFVEECQHPKSCTLLLQGPNSHTIDQIKDAVRDGLRAVKNAIEDQAVVPGAGAFELAAAMHLRNVVVKATKGRAKLGVEAYAEALLVIPKTLAENSGFDVQDCILNLTDAREDSDCTLAVGLDCTSGDPMIPADEGVWDNVRVKRQCLHLSTVLASQLLLVDEVMRAGKQMGRVPEG 459
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: B8CE84_THAPS (T-complex protein 1 zeta subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE84_THAPS)

HSP 1 Score: 375 bits (963), Expect = 1.320e-120
Identity = 195/302 (64.57%), Postives = 241/302 (79.80%), Query Frame = 3 
Query:  717 EAEVQSGF-YNSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPEGDEAGM 1619
            + EVQSGF Y+SA    ++    R      + + V++FKR+VC+ GESFV+INQKGIDPLSLD+FAKEGI+ +RRAKRRNMERLTLACGG P++ VED+ +DMLG+ GKV E TLG++K+TFVE+  +P+SCT+L++GPN HTI Q++DA+RDGLRAVKN +ED A+VPGAGAFE+AAA  L+   A   KGRAKLGV AYA+ALLV+PKTLAENSG DVQD ++++QDA  D+G    VGLD  +G+PM P  EGIWDN RVKRQ LHLSTVLA+QLLLVDEVMRAG QMGK P  D+A M
Sbjct:  249 KTEVQSGFFYSSAEEREKLVESERKWLDE-RCRQVVDFKRSVCQEGESFVMINQKGIDPLSLDIFAKEGILCLRRAKRRNMERLTLACGGSPIHSVEDLDKDMLGWCGKVSEVTLGDDKFTFVEECRHPKSCTLLLQGPNVHTIDQIKDAVRDGLRAVKNAIEDQAIVPGAGAFELAAAMHLREVVAKATKGRAKLGVEAYAEALLVIPKTLAENSGFDVQDCILKLQDAREDSGCTLAVGLDCQSGDPMIPADEGIWDNVRVKRQCLHLSTVLASQLLLVDEVMRAGKQMGKVP--DDANM 547
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: A0A7S2LGD8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGD8_9STRA)

HSP 1 Score: 371 bits (952), Expect = 5.780e-120
Identity = 194/301 (64.45%), Postives = 235/301 (78.07%), Query Frame = 3 
Query:  717 EAEVQSGFYNSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPEGDEAGM 1619
            + EVQSGFY S    R     +       + + V+ FKR+VC  GE FV+I+QKGIDPLSLD+FAKEGI+A+RRAKRRNMERLTLACGGHP++ VED+ + MLG+AGKV E TLG++K+TFVE+  +P+SCTILI+GPN+HTI Q++DALRDGLRAVKN +ED  VVPGAGAFEVAAAA+L+     +VKGRAK+GV A+ADALLV+PKTLAENSGLDVQD +I++ D   +     P+GLD+ TGEP+ P  EGIWDN RVKRQ L+LSTVLA QLLLVDEVMRAG  MGK    D  GM
Sbjct:  173 KTEVQSGFYYSTAEEREKLVESERKWLDERCRQVVNFKRSVCTNGEGFVIIDQKGIDPLSLDIFAKEGIIALRRAKRRNMERLTLACGGHPIHSVEDLDKSMLGWAGKVSEVTLGDDKFTFVEECKHPKSCTILIQGPNKHTIDQIKDALRDGLRAVKNSIEDRFVVPGAGAFEVAAAANLKNNVMRKVKGRAKIGVEAFADALLVIPKTLAENSGLDVQDVIIKLNDEHEET--EMPIGLDINTGEPILPADEGIWDNVRVKRQCLYLSTVLANQLLLVDEVMRAGRNMGKGAPADAGGM 471
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: A0A6S9AY65_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6S9AY65_9STRA)

HSP 1 Score: 373 bits (958), Expect = 8.090e-120
Identity = 196/301 (65.12%), Postives = 238/301 (79.07%), Query Frame = 3 
Query:  723 EVQSGF-YNSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQP-EGDEAGM 1619
            EVQSGF Y +A    ++    R      + K V++FKR VCK GESFV+INQKGIDPLSLD+FAKEGI+ +RRAKRRNMER+TLACGG P++ VED+ E  LG+A KV E TLGE+K+TFVE+  +P+SCT+L++GPN HTI Q+QDA+RDGLRAVKN +ED AVVPGAGAFE+AAA +L+   A E +GRAKLGV AYA+ALL+VPKTLAENSGLDVQD+++++ D    +GG   +GLD  +GEPM P  EGIWDN RVKRQ L+LSTVLA QLLLVDEVMRAG QMG+QP E D  GM
Sbjct:  249 EVQSGFFYKTADEREKLVESERKWLDE-RCKQVVDFKRRVCKDGESFVMINQKGIDPLSLDIFAKEGILCLRRAKRRNMERMTLACGGSPIHSVEDLDESQLGWANKVSEVTLGEDKFTFVEECKHPKSCTLLLQGPNTHTIAQIQDAVRDGLRAVKNAIEDAAVVPGAGAFELAAAMNLKDKVAKETRGRAKLGVEAYAEALLIVPKTLAENSGLDVQDSILRLVDERDASGGTMAIGLDCQSGEPMIPADEGIWDNVRVKRQCLYLSTVLANQLLLVDEVMRAGKQMGRQPPEDDGMGM 548
[Close]
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Match: K3WHV4_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3WHV4_GLOUD)

HSP 1 Score: 367 bits (942), Expect = 1.010e-117
Identity = 199/302 (65.89%), Postives = 238/302 (78.81%), Query Frame = 3 
Query:  717 EAEVQSGF-YNSARAARRMPSPARPLSPAAQVKAVIEFKRAVC--KPGESFVVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDMTEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQDALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMG----KQPE 1601
            ++EV SGF YNSA    +M    R  +   +VK +IE KR +C  +  ++FV++NQKGIDPLSLDM AKEGI+A+RRAKRRNMERLTLACGG P+N  EDM E MLG+AGKV+E TLGEE+YTFVEDV +PQSC+ILIKGPN+HTI Q++DA+RDG+RAV N +ED  VVPGA AFE+AA   L  Y  + VKGRAKLGV A+ADALLV+PK LAENSGLDVQD LI +Q+   ++G A  VG+DL TGEPM P QEGIWDNYRVKRQF+HL+T LA+QLLLVDEVMRAG +MG     QPE
Sbjct:  230 KSEVNSGFFYNSAEQREKMVEAERKFTDD-KVKQIIELKRELCTDENKKNFVIVNQKGIDPLSLDMLAKEGILALRRAKRRNMERLTLACGGMPINSTEDMDESMLGWAGKVYEQTLGEERYTFVEDVKHPQSCSILIKGPNEHTIAQIKDAIRDGIRAVNNAIEDQGVVPGAAAFELAAHEALNQYRGS-VKGRAKLGVQAFADALLVIPKVLAENSGLDVQDTLIAVQEEHANSGEA--VGIDLFTGEPMLPAQEGIWDNYRVKRQFIHLATTLASQLLLVDEVMRAGKKMGGGGGMQPE 527
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1130.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1PFD7_HETAK1.640e-18593.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V196_9STRA2.970e-13371.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LIP0_ECTSI4.290e-12466.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6S8ZRG3_9STRA4.130e-12265.12Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A4D9CV25_9STRA4.770e-12268.69Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2PA84_9STRA1.050e-12064.43Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8CE84_THAPS1.320e-12064.57T-complex protein 1 zeta subunit n=1 Tax=Thalassio... [more]
A0A7S2LGD8_9STRA5.780e-12064.45Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6S9AY65_9STRA8.090e-12065.12Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID... [more]
K3WHV4_GLOUD1.010e-11765.89Uncharacterized protein n=4 Tax=Oomycota TaxID=476... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1130contigH-akashiwo_Contig1130:115382..126435 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIP0
Preferred nameCCT6
PFAMsCpn60_TCP1
Model size1655
Max annot lvl2759|Eukaryota
KEGG koko:K09498,ko:K19401
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005856,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0032991,GO:0042221,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046686,GO:0050896,GO:0051082,GO:0061077,GO:0101031
Exons12
Evalue4.7e-128
EggNOG OGsCOG0459@1|root,KOG0359@2759|Eukaryota
Descriptionunfolded protein binding
Cds size912
COG categoryO
BRITEko00000,ko03036,ko03110,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387092.211412-UTR-H-akashiwo_Contig1130:115381..1154141681387092.211412-UTR-H-akashiwo_Contig1130:115381..115414Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1130 115382..115414 -
1681387092.274725-UTR-H-akashiwo_Contig1130:120508..1205981681387092.274725-UTR-H-akashiwo_Contig1130:120508..120598Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1130 120509..120598 -
1681387092.2849233-UTR-H-akashiwo_Contig1130:121251..1213731681387092.2849233-UTR-H-akashiwo_Contig1130:121251..121373Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1130 121252..121373 -
1681387092.2964585-UTR-H-akashiwo_Contig1130:125442..1255201681387092.2964585-UTR-H-akashiwo_Contig1130:125442..125520Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1130 125443..125520 -
1681387092.3089278-UTR-H-akashiwo_Contig1130:125659..1257371681387092.3089278-UTR-H-akashiwo_Contig1130:125659..125737Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1130 125660..125737 -
1681387092.3190284-UTR-H-akashiwo_Contig1130:125858..1259301681387092.3190284-UTR-H-akashiwo_Contig1130:125858..125930Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1130 125859..125930 -
1681387092.3299735-UTR-H-akashiwo_Contig1130:126042..1261911681387092.3299735-UTR-H-akashiwo_Contig1130:126042..126191Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1130 126043..126191 -
1681387092.34021-UTR-H-akashiwo_Contig1130:126314..1264351681387092.34021-UTR-H-akashiwo_Contig1130:126314..126435Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1130 126315..126435 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387092.2208924-CDS-H-akashiwo_Contig1130:115414..1155501681387092.2208924-CDS-H-akashiwo_Contig1130:115414..115550Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1130 115415..115550 -
1681387092.228796-CDS-H-akashiwo_Contig1130:117024..1171131681387092.228796-CDS-H-akashiwo_Contig1130:117024..117113Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1130 117025..117113 -
1681387092.2366962-CDS-H-akashiwo_Contig1130:117289..1174061681387092.2366962-CDS-H-akashiwo_Contig1130:117289..117406Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1130 117290..117406 -
1681387092.2445877-CDS-H-akashiwo_Contig1130:117719..1178091681387092.2445877-CDS-H-akashiwo_Contig1130:117719..117809Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1130 117720..117809 -
1681387092.2525468-CDS-H-akashiwo_Contig1130:118222..1186421681387092.2525468-CDS-H-akashiwo_Contig1130:118222..118642Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1130 118223..118642 -
1681387092.2664337-CDS-H-akashiwo_Contig1130:120448..1205081681387092.2664337-CDS-H-akashiwo_Contig1130:120448..120508Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1130 120449..120508 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1130.2.1prot_H-akashiwo_Contig1130.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1130 115415..120508 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1130.2.1

>prot_H-akashiwo_Contig1130.2.1 ID=prot_H-akashiwo_Contig1130.2.1|Name=mRNA_H-akashiwo_Contig1130.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=304bp
MREAEVQSGFYNSARAARRMPSPARPLSPAAQVKAVIEFKRAVCKPGESF
VVINQKGIDPLSLDMFAKEGIMAIRRAKRRNMERLTLACGGHPVNCVEDM
TEDMLGYAGKVWETTLGEEKYTFVEDVANPQSCTILIKGPNQHTITQVQD
ALRDGLRAVKNCLEDGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVA
AYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEP
MAPDQEGIWDNYRVKRQFLHLSTVLATQLLLVDEVMRAGMQMGKQPEGDE
AGM*
back to top

mRNA from alignment at H-akashiwo_Contig1130:115382..126435-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1130.2.1 ID=mRNA_H-akashiwo_Contig1130.2.1|Name=mRNA_H-akashiwo_Contig1130.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=11054bp|location=Sequence derived from alignment at H-akashiwo_Contig1130:115382..126435- (Heterosigma akashiwo CCMP452)
CAGAAAATGTCTTCAACACGACTCGTCAACGCGAACGCAGAGGTGGTCAG
TCGGTCTCAAGCTCTGGCTGTCAATTGTTCTGCTGCGAAGGGGCTCCAAG
AAGTCATGAAAACCAACCTGGGCAAGTTATGATTTTTTTCTCATCTCTTA
CGTCCGAAAGTACAGCCTGAAAGGGTGCAAATTGTTGGTAAAAAATGGTT
TCATCCGTAAAAATAACGGCATCAGCATTTACATTATTGTTCAGGTCCTA
GGGGCACCCTGAAGATGCTTGTGGGAGGCGCAGGGCAAATAAAACTTACC
AAGGATGGGAAAGTCCTTCTTCATGAAATGCAGATCCAGCACCCTACTGC
AATGCTTATTGGGCGGACTGCAACTGCCCAGGATGATATAACAGTAAGCC
AAGAACCCAAACTTGTATTATTCCAATCCCCACTGATTGTCCAACCCATC
CACAATAATCCATCGAGCAACCTCCCAAGCAATACTTCTCTCTTTTGTCT
TGCAGGGAGATGGGACAACATCTGTCATTATCTTCTGTGGAGAGCTCCTT
AAGCAGGCAGAAAGACATCTTTCAGAGGTGTGCTAAAGTCCGCGCTTTAC
TTTCTTTCTTTCCCCACAACTTGACCTGAGCTTTTTTTTACTCACCAGTT
GTCAACTGACAACTCTAACTCTCGCAAACATCATCCTTCATCTTCCAGGG
TCTTCATCCCAGAGTCATCACTGAGGGTTTCGATCTGGCAAGAGACAGAG
TGCTGACATTTTTGGACGGTTTCAAGGTGAGTATGAATAAGCCTCAAACA
AACCCCCTCCCAGGGCATGCAAGCACTCGCATGCCCCATGACCAGGGCAC
AAAGCAGTATAAACCCCCTCACTGCTGCGCGCCGAACCCTCCCTTTCCAT
TCCCACCTCCCGCAGGTGGCAGCCCCGGACCCGGACCGCGAGCTCCTGAT
GAACGTCGCCCGCACCGCCCTCCGCACCAAACTCGAGCCCCAGGTACATA
GGAGAACAGCCCCTCCCGCCCGCCCCCCGCCAAGCCACCCAAGAGCCCCT
CCGGAGCGGAGCGGCGCCCGTTCCATTCCCACCGCGCCCCTGACAGGAAA
CCATCATGGGGGTACACAAATCACAACACCTTGAAACAACAGTGCAGCTC
TGCGAGACCTGTATACGACCACAAGCTGTGCTGCGTTCCCGTCTGGCGCT
CCGTGGTATCATAGCGCGCCCATACATTTCCGACTCCGCAGACACCCCTC
CCTCCCCGCCCCTTCCCCCCCCCACCCGCAGCCTTCCGTTGCCTGCAGCG
CCGCGCAACTGGCGGGCGGCATCCGCAGGCGGTGACCGGCGCCTGCCTGT
GCGTCTGCAGCGCGCGGGGCAACCGCTGGACCACATAGTGGAATTTTGCA
TAGCCCACAGCAGCGCCGCCGACCACGCGCCTGCGTCTTGATGCAGCGCC
CGCCCGCCGCGCCCCGCCGCCCGCCGCGCGCGCCGTCGCCCTGGCAGCCC
GCCCCGGCGAAGATGCTGATGTCTTGCCTTGGTCGGCCCGCAACGAGTCA
GCGAACCGGTGGTTTCACGTGTCTGTAGCGACAGAAACCCGTCGTTTCGA
GAATGTGCATAGCATTCCCCCCCCCTCTGCCCTTTCACCCCTTCACATCC
CCTCTGCTTGCTTCCATGTATATTTATATACACGTTATGGATGGGCTCGA
CCTCGATGATAAAAACCTGTCTTAGAAAAACCATGATTATCCAAAGAACA
GATACCCAAATCATTATTACTACAGATGATCTTAATTTGAGAGGTCGTTG
CTTATCCTTGCCCCTGCACTGCTTACTTTGCGTATACATAGCTGACTGTA
GGATTTCCCTCACAGGCCACATTTATGATAGCATCCCACCTCTGTCTGCC
CTTAAAAAAAATAGCTACGACCCTTTTCACTCACCATTGTGATGTCCTAC
CCCTTCCCCTTGCTGCCCTACAGTTCCTACGATTCTCATTCACAATTAAG
ATTCCATTGTGATGTCTTACCCCTTGCTGCTCTACAGTTCCTACGATTTT
CATTCACAATTAAGATTCGGTAACTTTTATGGTAGGCTACCGATCTTATT
ATAACTCCCGTGGACCTATGTAGATAGGCACTGGATTTTGTTGTTGTGTA
TTATGCTGAAGGACTGCTATGTGAAAAAGCATTATTTCAGACCGGAGAAG
AAGAAGAGTAAGCTAATGCAAATACAATCCCTCACATTACCTAACCCAGT
TGCAGAAGCCCCTCCGCCCCTTCTTCCAGTATGCCCAAGGCATACAAGCT
CCCTGTTCGCTCCTACTTGAACTGATTCGGAAAGAAATTCCTCCTGAGCT
CCGGCTTGGCCAAGATCAGTTCGACGATCTCACCCCACGCCTTGGCCTTT
TGCCAGATCTCGCCACCTTGTTCTTCATCAGCTGTACGCCACGTCTCCAA
CAGATCCCCTACCGTATGTGCTCAGCAAATCGAGCTGCTCTTCTTTCTTC
GTTTCCCCGACCGCACTCTTCTGGTGGGCCAGGTCTTCCTTGGCCTAAGA
CGCGTTCGCCGGTGCCTCAGTTGGCGCCTGTACCTCGTCACTTGTGGAGG
TCTGAACCCCTCTTTCTTCTGGTTCCTTGTTTGTTGCCCCAGCTAGCGGC
CGTTCCTCTATCGCCTCCTGTCTCAGGGCACCCTGTTCGCGACTCCGCTG
AGTAAGTCTCTTGTTTTCCCGCTGCTGCTGCTTCTTATGAACCTGTTTCT
CTCTCCTCTTTCGCGCTCCTGGAGAGCTGCCCGACCCATTCTCCCCCCTC
AGGCTTCTCCTGGAACAGCCCCAGTCCTCCTCCATCACGGCGTTCACTGG
GATCCCCTTCTTCACTGTCGGAGCTGTCAGACCCACCAGACGACTCCTCA
GGCGCTGACGCACACCTGGCCAGAGCCAGCTCAGCCTGTAGAAGCTGAAT
GTAGGTGCTTTGCTTCCCGAACTCTAGCTGCAGAGTGTTATGCTCCTGCT
GCAGAATGTCATGCTCCATCTTAAGCTTGTTCAGCTCACTGTGCTCAGAG
TCTCCCTGGTTGCCATGGTTCATCCAGCATCGTGATGGAGGAGGACTGGG
GCTGTTCCAGGAGAAGCCTGAGGGGGGAGAATGGGTCGGGCAGCTCTCCA
GGAGCGCGAAAGAGGAGAGAGAAACAGGTTCATAAGAAGCAGCAGCAGCG
GGAAAACAAGAGACTTACTCAGCGGAGTCGCGAACAGGGTGCCCAGAGAC
AGGAGAAGATGGAGGAACGGCCGCTAGCTGGGGCAACAAACAAGGAACCA
GAAGAAAGAGGGGTTCAGACCTCCACAAGTGACGAGGTACAGGCGCCAAC
TGAGGCACCGGCGAACGCGTCTGGGGCTAAGGAAGACCTGGCCCACCAGA
AGAATGCGGTTGGGGAAACGAAGAAAGAAGAGCGGCTCGACTTGCTGAGC
ACATACGAGAGGGATCTGTTGGAGACGTGGCGTACAGCTGATGAAGAACA
AGGTGGCGAGATCTGGCAAAAGGCGTGGGGTAAGATTGTCGAACTGGTCT
TGGCCAAGCCGGAGCTCAGGAGGAATTTCTTTCCGAATCAGTTCAAGTAG
GAGCGAACAGGGAGCTTGTATGCCTTGGGCATACTAGAAGAAGGGGGGAG
GGGTTTCTGCAACTGGGTTAGGTAATGTGAGGGGTTGTATTTGCATTAGC
TTACTCTTCTTCTTCTCCGGTCTGAAATTATGTTTTTTCACATTGCAGAC
CTTAAGCATAATACACAACAACAACAACAAGAAAATGATTGGTATGCCCA
CGAAATGTTGTTAAATACAATTGATATACAATCGATATACAAGAAAGGAC
CCTCATAAGACGAAAGACGAAAGAGATGAAAGATACCAAGCGAGGCCTGA
ATGGCCCCAAGACGGTAATATTTCAGCTTTGAGAACATAATTCTGTAGAG
GGAAGAAACAGTGGTTTTTTAAAGCATTTTCCGAGATATGATTTCCTGAG
CAAAATCACCACAAAAATTTCAAAAACTGACTGCAGGAGAAGATAATTCT
TCAAGGATAGCAAACAGTGAAGCCGGAAAGTACTTGTTTAGTATGCTCCG
AGGATATTCTTGGTTGTTGGTATGTATATTCAAAACGTGACTTTCGGATT
TCACGTCGCGGGTAAGGAATTCGAAATGTGACGGGGGGCTTTGTAAGAAA
AATACACTTCCAAAGTAGCCTAGACCAATATTCTTAGTAAGCCACCAAGT
CTTAATTGCGAATGAAAACTGTAATCTTCTGCTACCCGCTGGAGCATCAT
TTGGGGTGTGACAGGGGAGAAGATAATTGGTACAAAGGATCATGCCCTAA
CAAAGTGGCACCACACGCTGTGCTCGAGTACTTTTTTACTTTGTTTTGAT
GATCTATGATTGTTTTCAGGAATTCGAACTCTCTTGATATAATTGATTAA
ATAAGACCATCATCAGGGCATAGGATTTTCTAAAAAGAAGACGCTGGACC
AGTCTAATGCTTCACAGACACCATCAAAGCTTTAAAAAGCCAAGGCCAAA
ATTAATGTGTGATTCTAATATATTTTAAAAGGACTGTTGCAGACCGGTTT
CGGCTAAAAAAGCCATTGTCAGTACAACTGTCGTACAAAATAATTAATAT
ACATGTATAGATAATTAGAAAATGATCACCGATGGAATGGAACAATTACT
AAGTATATGTAATCTTCTATATATAGCAAATGATCGCCTCTCCAGCTCCC
CGACGTTCAACGTGCAGTCATGCCTTCTTAACAGAGTCACGGAGTGGCCA
AATCCAACCCAGGCCCATCAAAGATAATGAAGGCGGTCTCCACAATAACA
ATAAAACCAAGCAGCTGACAAGACACAAAAACCGCGACCGTCACGGTTAC
CCCACCCCTTTTCTTCTTCCTCCTCCTTCCACTGCGAAAAACGAAAGGAA
AAAAAAAAAAAAAAAACTGTTATACCCAAGATTCACACCCTCCTTTTTAC
TTGTCGCTTCTCGCCCGCCCTTCTTCTTCGACTCCTTCTCTTCTACGTAC
CACGCATCCAAGACCAGCAGAAGAGTAACCCTCCTCGGTGCCCCAACGGT
TTTCCAACGATACCGCTCCCATCCGCACGCAGATCCCGTCTGGGTCCTCC
TCATCATTGTGCGAGCACCGCTGCTTCTTCGTCAGTCTCTCAATCCTCTT
GAGCCGCGTCGTCCGCTGGCCTGAAGATCCTCCCCCCGCGCTCCTTGCCA
AACCTCTCTCTCCGCTTGTGGCAAGCCCTCGCCCTCTCGTCTCCCTCCCC
CCCCTGGGATCAGGTTGTACTGCACATAATATTTACAGTCTGAACTGATA
GACGTGCCTTCAATGATTGTACAACCTTGGCACCCCCTCTATCCTCATGG
AAGCAGGTAGGTAGCAATTTTTATGGTTAGTTGGAAAAAGCTACTATATG
CTACTCTTGAATCCCACTCCATGACAATTATGCTAACATTCCGGCTACTT
GAACCCAAGGCTGGCACCACTGCCTCAAAAAATAGCTTTTTCTAACTAAC
CATATAGAAAAATTCTGCCTATCTGCTTCCATGAGGATGATAGGGGTGTC
AAAAGCACGTCTATATATGTTCAGACTGTAAATATGCGCAGTAAGTATCT
ACAAACAAGTAATTCTTTATTTTTGATCTTGCATACTGGCACTGCATTCG
GTGTCACTTTGTGGTTAAGCCCCCTCTTGTAGGACAACACTTTGGCATCA
TTAAGACCTTGACGGACACCCCGACTGACGGCAAAAGCAGGCTTCGGTAC
TCTCCAAGGATCCCCCACCCCCCGGGGCCGCCCACAGGGGCATGGTGCTG
GACCACGGGCCGCGGCACCCGGACATGCCCACCAAGCTGGAGAACTGCCG
CGTCCTGACCGTGAAACGTGTCCCCCGATGCGAGAAGCGGAGGTGCAGTC
CGGCTTCTACAACAGCGCCCGAGCAGCGCGGCGCATGGTGGAGGCCGGCG
CAAGTTCACCGGCGACAAAGCGAGCCCGACCCCGCTCCCCCCCCCCCCCG
CCCGCCTGCCCAAAAGAGGATTGTGGCGGATCACATGCCGTGGGTGCGCC
TTTCCGCCCGGGGGCAGTTTTCAGTACATACATCTCCCAGACAACATCAG
TCTCTCACACAAGGAATCATCGATTATTTTCAGGAGCTCAACTTGAACTT
GTCCATGCAACAACATGCCCACCATTGGGGGATAAGAGAGGTTCTGAAGA
TATTGAGTCAGGAACCTTATCATTGTATTTTGTGGTGTTAGAAGTGTGCA
TCTTGTAGATCTATATAGATATATTATATACGGTTGTTGGAAGGCTCAGA
GAATATGTGTTCTTGTGTACCTTATGGAAGAGAGCAGGGGTATTGCGAGA
AGTGGTAGAGTGAGGTGGATGGGTTTGCGTATAGAAGCTAGGGGCTCAGC
CCTGAAAGCGATTTGAAAGGCTAGACCTTAAAATAAATTTAATATAATCG
TCATCATCATACCAAGACACCGCCAAGACGCATATATATATGCCACAACA
GTTAAGTTTCTCTCTTCAACTCTGAATCTTCATCATTCCTGAGCTGTACT
TGAACAATCGTATGAATTCAACCCTGGAAGGTTTGACAAGACAAGCACAC
ATGGCATGTGAATGAGAAGAAGCCTGCTGAAGAGAGAAATGTACCTGCTC
CCAAGATTGCCAAGATTCAAGAAGACAAAAATCGAGGGACAGAGAGCGAT
CAGTCCCACTTCTCGATGGAGTATAGTAGTTATAGTTTGCGCTCACCATC
AAGGGCAAGTGTTCGGCTTTAAGAAGTGTGACGACGCACTTCTGGCCAGT
CAGAGCAGCAGTCTCTCTATATCAAGAACTGAGTCGAGGCGACTACCCTT
GAATAAAAACAAAATCACACCTTAACTTGCCTTACATCTACATCTTATCA
CATGCCTGCTCCCAAGGTTGCCAAGACTGGGAAATTTTTAATGATATAAT
AATGGGCACATGGAAAATTGAAGGGCAGGCACAAGTGGCTCTTGAGCAGA
GCGCCTCTTACAGGGTTGAGCTCATACATTTATGTATCCATCCAGCTCAA
GAGACAGCAGACCCGATGCTCAAGGGAAGCGTTGAAAGTTTTTGGTTCAA
AGGGGAAGTGTGGTAAAACGACTTCTCCTTACAACATAAAATAAATCAAA
AGTACGTCGACAACAGTCGATCCTCTTTTTTTTTTACTTCTCACAATGGG
TCTTTTAAATACAGTTAGTCGCATTGTAAGATCAAGTTTTGGCTCTGGAC
ACCAGCAATGGTTACTTTGGAAGATGCCGTCTGATATATGTTGTCTGGAG
ATGATGATGATGATGTTAATTTTAGTTTCAAGTCTAGCCTTTCAAACCGC
TTTCGGGGCAGAACACCTAGCTTATACGTTATATAAGCAGACCCTTCCAC
TTCTACATACCTGCCATTTCTAATACCACTGCTCTGGAGATGTAAATACG
TATATATAGATGGGTTTCGTGACAACCACCCGAGGGCAGCTACCTGCGCC
CCAGGCACAAAGGCACCTCGCGGCGTGTGCTGGTCCAAACCCCCACCCCC
GGCAAGCCGGCCGCTGTTCTGCTGCCCCCACTGGCCAACAAACGGCGTGC
TCACCAAGATGTGGGCCCGCCGGCGGGGTTCTAAGACTCACAGAAGGAGG
TCCCGGTCGGGCCCGCCCCCTCCTCCTGCTCCTTCCCCTGGCAGTGGTTC
CAAGCCGCCCCCTGCCCACCTGCGGCCTCCCAGCCCAGCTCAGCCCAGCC
CTGCCCGCCCCCTCTCCCCCGCGGCACAGGTGAAGGCCGTGATCGAGTTC
AAGCGCGCGGTGTGCAAGCCGGGGGAGAGCTTCGTGGTGATCAACCAGAA
GGGCATCGACCCGCTCTCGCTGGACATGTTCGCCAAGGAGGGCATCATGG
CCATCCGGCGGGCCAAGCGGCGCAACATGGAGCGGCTGACGCTCGCCTGC
GGGGGCCACCCGGTCAACTGCGTGGAGGACATGACCGAGGACATGCTGGG
CTACGCGGGCAAGGTGTGGGAGACCACGCTGGGCGAGGAGAAGTACACCT
TCGTGGAGGACGTGGCCAACCCGCAGAGCTGCACCATCCTGATCAAGGGC
CCCAACCAGCACACGATCACCCAGGTGCAGGACGCGCTCCGCGACGGCCT
GCGCGCCGTGAAGGTGAGCGCGGGGGGGGGTGAGGGAGGGAACCCCCGCC
GCCGTCGCCGCCGCCGCCGCTGCGCGCCTGCTCCTCTTTTGGTCTCTCTT
TGGTTCTTGAAAAGCAGGCGCCGGAAGTGCATGGCGCGCACCCGGAAAAG
CAATGAATGGACCGTGCATCATGTATACATACTTGCAACGTGAAAACCTC
TCCAACCTATTCAAAGAGAGGCGGAGAATGCTTTTCACACCACCTGTAAA
TGTCGAATTCGCCCCTGAGAGCAGGAAGGGGCAGGGGCGGGGCCAGCCCG
GCAGCGACAAGCGACGGTCGATCCGCCGCCTCGCGGTTTCCGTCGCCGCG
CCCCCACCACCGGCCGACCCGCGCCCCCGCCCTCCTCCTCGGCCCCGTTG
CCGCCGCCCGCCCGCCCGCCGGCCAGAACTGCCTGGAGGACGGCGCGGTG
GTGCCCGGGGCGGGCGCCTTCGAGGTGGCGGCGGCGGCCGACCTGCAGGC
CTACGCGGCCGCCGAGGTGGAGAGCGGGGGGGGCGGGGGTTGGGTCTGAC
GGTGGTGAAACGGTGTTGGTGCAGGAGGTCTGGTCCTGCACCAGGTCTGG
TTCTTGCTACATACAGGGGGGTTCTTACTTTGGTGTGGGTACATTACTGA
TACTGATACCTTTACATATAAAAACTACACGGCACTGAAAATATCAGTAC
CATCGTCATCAAGGTGCCATGGGTTGGACCGTCAATTGAACAAACGGCGT
ATACTGCATAGTATGCGAAGCCTCGTCGCCATCCTCACTCGCGGCATGCC
CTTCCCCCCCGTGGGCGGCGGGCGGGCAGGTGAAGGGGCGCGCGAAGCTG
GGCGTGGCGGCGTACGCGGACGCGCTGCTGGTGGTGCCCAAGACGCTGGC
CGAGAACTCCGGCCTGGACGTGCAGGACGCGCTCATCCAGATGCAGGCAC
CCCCCACCGCCCCCACACACCCCCACCCCGAACCAACGCGGCGGTCCGTC
CTCGCGGCGCGCTCCCTACGCCTTCGATGGGGCGCGCGGCAATCTCTCAC
GGGCCGCGGCGGCCGCGCTTACCCTCCCCTCCTCCACTCGCCGCCGTCCC
CCCCCTCCTCCCCCGCGACCAGGACGCGCTGCGCGACAACGGCGGCGCCG
CCCCCGTGGGCCTGGACCTGGTCACCGGCGAGCCCATGGCCCCCGACCAG
GAGGGCATCTGGTGAGGGGGCGGGGCACAGGGTCTTCGTCGTTCTCTCCC
CCCCCCCTTTTGGCTTTCCTCCCTGGGTTTCTGGCTTACTCTCAGTAGGC
TTGTTCTTCATCTCCGATCTTTCTCGTACGTTTCTGGTAGCCAGAGCTAA
ATTAACGCGCACTCACTGTTGAAATGTGTATGTAGTCGTTCTTTTTGACT
CAGGGGGTCACAGTTTTTGTTCTATATCTATCTATAGTTGCATTAAACAA
ACCGTCAAGGGTGTTGTTGGCCATAATAGGAAGGCAACCTCAGCATGTGG
AGCCCAGGGATTGTGTTTTGGCAAGGTGGCAGCCGTTCAAAGTTGGTGGC
ATCTATACTTTGAAAATGATTTGATTCAGTAAAAAATCGAACCAAAATGT
TGTATGTATGCGTATATACATATAAATAAATAATAAAACTCTCCCTTTAC
ATAAAGTGTTTGTTTCGAAGAATTCTATCAATTGGAAGGTACATTCACAG
AGATGCAGAGTGTGTACTTCGTATGTAAAGTTAGAGGAGGAAAAAAAAGG
CTTTTTCTTTCCTTTGGCCAGTTTAACCGCCCACAACAATAAAACCTCTT
ATACAAAACATTAATAAAACCTCCTACAATGCATTCCAATAAATAGAGCT
CTGCAAAACAAACATTTTTATACACACACAAGAATGGAAAGATGATGATG
AAAGACTTTTGTTCCAGTATTGCTTTTTAGATTGCTTTCAAGGCTGGCCC
CCTTGATAGCTTCTGTAGGCAGACCCTTCCGAACAGTCAGGAACACCAGA
GCTGGAGGAGGCCAATATGCGTACTAAAAGTCTATGGTAAGCTCAAGTGG
TCGAGTGGTCAAGAGAGGAACTTTGTGGTGCATTGAAGCTTGAGCCCCAT
GTCCGGGTCTGTCTTGGCCAGAATTCCGTCGATTATACGCCCATCAAACC
AGTTTTGAGGCTTTTGGATCATGGACCAGTCATTGCATCACGGAAATGTC
AGCAGGCTAAGCTGGGCAAGGAAAGAATACGGTAGCGGTCTAAAAGAGTG
TGTGGTTGGAGTTGATCCACAACGTCAACAGCGATCTGATCTAAAGCGTT
GACAGAAGAAGGTCGTCAGCAACGGATGGTTGTCGGTGATGGGTTACAGA
AATGTTTGGTAGTGCCGGGAAGGACCGATGGTATGAGATCTAACACTACC
GGTCTCCCATCGACAAGCTCAGAACCACTTAACATTCAAGCGTTCGGTCA
GTGGCAGAGAACGTGCCTTAGGAGGATGTGACGAGGGCATGAGAACGTAT
TTTAGTAAATGAAAAAATACATATATTTAAAACGTTTATCATTCTTCTTA
CGCTTAGTTGGAACCATCATCAACTGCCATACGTTTCTATGGATGGATCA
GCAATAAGTACAACATATGCTTCCTCCTGCCGGTTTATTTAAATAGTGAA
AGTGGTTTTCTGTGTTATAACTGAAATCTTTACAGGGATAATTATCGGGT
AAAGAGGCAGTTTTTGCATCTCAGTACAGTCCTTGCAACCCAGTTGCTTC
TAGTGGATGAAGTGATGCGGGCCGGAATGCAGATGGGAAAACAACCAGAA
GGAGATGAAGCAGGGATGTAAACAACAATTATCATGGGTAAAATAATATC
TAGC
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1130:115382..126435-

>mRNA_H-akashiwo_Contig1130.2.1 ID=mRNA_H-akashiwo_Contig1130.2.1|Name=mRNA_H-akashiwo_Contig1130.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=912bp|location=Sequence derived from alignment at H-akashiwo_Contig1130:115382..126435- (Heterosigma akashiwo CCMP452)
ATGCGAGAAGCGGAGGTGCAGTCCGGCTTCTACAACAGCGCCCGAGCAGC
GCGGCGCATGCCCAGCCCTGCCCGCCCCCTCTCCCCCGCGGCACAGGTGA
AGGCCGTGATCGAGTTCAAGCGCGCGGTGTGCAAGCCGGGGGAGAGCTTC
GTGGTGATCAACCAGAAGGGCATCGACCCGCTCTCGCTGGACATGTTCGC
CAAGGAGGGCATCATGGCCATCCGGCGGGCCAAGCGGCGCAACATGGAGC
GGCTGACGCTCGCCTGCGGGGGCCACCCGGTCAACTGCGTGGAGGACATG
ACCGAGGACATGCTGGGCTACGCGGGCAAGGTGTGGGAGACCACGCTGGG
CGAGGAGAAGTACACCTTCGTGGAGGACGTGGCCAACCCGCAGAGCTGCA
CCATCCTGATCAAGGGCCCCAACCAGCACACGATCACCCAGGTGCAGGAC
GCGCTCCGCGACGGCCTGCGCGCCGTGAAGAACTGCCTGGAGGACGGCGC
GGTGGTGCCCGGGGCGGGCGCCTTCGAGGTGGCGGCGGCGGCCGACCTGC
AGGCCTACGCGGCCGCCGAGGTGAAGGGGCGCGCGAAGCTGGGCGTGGCG
GCGTACGCGGACGCGCTGCTGGTGGTGCCCAAGACGCTGGCCGAGAACTC
CGGCCTGGACGTGCAGGACGCGCTCATCCAGATGCAGGACGCGCTGCGCG
ACAACGGCGGCGCCGCCCCCGTGGGCCTGGACCTGGTCACCGGCGAGCCC
ATGGCCCCCGACCAGGAGGGCATCTGGGATAATTATCGGGTAAAGAGGCA
GTTTTTGCATCTCAGTACAGTCCTTGCAACCCAGTTGCTTCTAGTGGATG
AAGTGATGCGGGCCGGAATGCAGATGGGAAAACAACCAGAAGGAGATGAA
GCAGGGATGTAA
back to top