mRNA_H-akashiwo_Contig112.33.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: A0A1U7ZLT5_NELNU (dnaJ homolog subfamily B member 1-like isoform X1 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7ZLT5_NELNU) HSP 1 Score: 119 bits (297), Expect = 7.380e-30 Identity = 61/118 (51.69%), Postives = 77/118 (65.25%), Query Frame = 2
Query: 53 INFYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRDGVAAVEDEDNYPAATGPGRGDFPGGRGSPIDP-----FFATGFGASPF 391
+++YD+L V KNA + +K++YRKLA+KWHPDKNP+NK+EAE FK +SEAY VLSDPQKR YD YG +G+ P TG G FP G S +P FA FG+SPF
Sbjct: 3 VDYYDILKVNKNATDDDVKKSYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKRAVYDQYGEEGLKGAP-----PPGTGGGGFPFPNGSSSKFNPRNAEDIFAEFFGSSPF 115
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: F0YF77_AURAN (J domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YF77_AURAN) HSP 1 Score: 112 bits (279), Expect = 2.970e-29 Identity = 59/100 (59.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query: 59 FYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRDGVAAVEDEDNYPAATGPGRGDFPGG-RGSPID 355
+Y VLGV ++AD+SQ+K+AYRKLA+K+HPDKNPD+K AEE FK V+EAY VLSDPQKR YD +G+DG A E + G G G FPGG RG +D
Sbjct: 12 YYKVLGVHRSADDSQLKKAYRKLAIKYHPDKNPDDKR-AEEYFKAVAEAYDVLSDPQKRAGYDRFGKDGAKAAEQGQDM-GGMGQGFGGFPGGSRGPQMD 109
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: A0A7S2Z782_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z782_9CHLO) HSP 1 Score: 112 bits (280), Expect = 3.600e-29 Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 2
Query: 62 YDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRDGVAAVEDEDNYPAATGPGRGDFPGGRGS-PIDPF 361
YD+LGVG++A ES+IK+AYRK A+KWHPDKNPDNKEEAE FKLV+EAY +LSDP+KR+ YD YG + V + G G G FP G +DPF
Sbjct: 17 YDILGVGEDATESEIKRAYRKQAIKWHPDKNPDNKEEAELRFKLVAEAYGILSDPEKREVYDAYGLEAVKSGAAPRG--GRQGAGMGGFPRSSGGFHVDPF 115
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: A0A2I0B8T0_9ASPA (DnaJ protein like n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B8T0_9ASPA) HSP 1 Score: 115 bits (288), Expect = 1.850e-28 Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 2
Query: 53 INFYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRDGVAAVEDEDNYPAATGPGR---GDFPGGRGSPIDPFFATGFGASPF 391
+++YD+L VGKNA + +K+AYRKLA+KWHPDKNP NK+EAE FK +SEAY VLSDPQKR+ YD YG +G+ + P ++G G GDF R + + FA FG+SPF
Sbjct: 3 LDYYDILKVGKNATDEDLKKAYRKLAMKWHPDKNPTNKKEAEAKFKQISEAYEVLSDPQKRELYDQYGEEGLKGIPP----PGSSGGGANGSGDFFNPRNA--EDIFAEFFGSSPF 112
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: A0A8B6XJ43_HYDVU (dnaJ homolog subfamily B member 6-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B6XJ43_HYDVU) HSP 1 Score: 109 bits (273), Expect = 2.030e-28 Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 2
Query: 59 FYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRDGVAA 274
+Y +LGVGK+A ++ IK+AYRKLA+KWHPDKNPD K EAEE+FK +SEAY VLSD +KR YD+YG+DG+ A
Sbjct: 5 YYSILGVGKSATDNDIKKAYRKLALKWHPDKNPDKKAEAEEMFKKISEAYEVLSDKEKRNVYDVYGKDGLKA 76
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: UPI00077A2B8B (dnaJ homolog subfamily B member 6-B-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A2B8B) HSP 1 Score: 108 bits (271), Expect = 2.720e-28 Identity = 48/68 (70.59%), Postives = 59/68 (86.76%), Query Frame = 2
Query: 59 FYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRD 262
+YDVLGV KN+ + IK+AYRKLA+KWHPDKNPDNK++AEE FK +SEAY VLSDP+KRQ YD YG++
Sbjct: 4 YYDVLGVPKNSSDQDIKKAYRKLALKWHPDKNPDNKQQAEENFKEISEAYDVLSDPEKRQVYDRYGKE 71
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: A0A0R3U1S7_MESCO (J domain-containing protein n=2 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3U1S7_MESCO) HSP 1 Score: 113 bits (282), Expect = 3.260e-28 Identity = 65/122 (53.28%), Postives = 80/122 (65.57%), Query Frame = 2
Query: 44 MDNINFYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRDGVAAVEDEDNYPAATGPGRGDFPGGRGSP----IDPF--FATGFGASPF 391
M+ +++Y VL V +NAD IK+AYRKLA+KWHPDKNPDNKEEAE FKLVSEAY VLSDPQKR+ YD++G++G++ GP +F G DPF FA FGAS F
Sbjct: 1 MEELDYYSVLKVDRNADGETIKKAYRKLALKWHPDKNPDNKEEAERRFKLVSEAYEVLSDPQKRRIYDVHGKEGLSNG----------GPSPSNFSGYDAFSSFHFTDPFELFAEVFGASVF 112
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: A0A0R3X7Q2_HYDTA (J domain-containing protein n=2 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3X7Q2_HYDTA) HSP 1 Score: 112 bits (281), Expect = 5.120e-28 Identity = 63/123 (51.22%), Postives = 79/123 (64.23%), Query Frame = 2
Query: 38 ATMDNINFYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRDGVAAVEDEDNYPAATGPGRGDFPGGRGSPI---DPF--FATGFGASPF 391
++M+ +++Y VL + + AD IK+AYRKLA++WHPDKNPDNKEEAE FKLVSEAY VLSDPQKR+ YD YG++G+ G G DF G P DP FA FG+S F
Sbjct: 12 SSMEEVDYYTVLKIDRGADGESIKKAYRKLALRWHPDKNPDNKEEAERQFKLVSEAYEVLSDPQKREIYDTYGKEGLTNG----------GVGPSDFSAFGGFPFHFRDPMEIFAQVFGSSLF 124
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: A0A426ZNM1_ENSVE (J domain-containing protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZNM1_ENSVE) HSP 1 Score: 111 bits (277), Expect = 6.460e-28 Identity = 60/122 (49.18%), Postives = 73/122 (59.84%), Query Frame = 2
Query: 53 INFYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRDGVAAVEDEDNYPAATGPGRGDFPGGRGSPID---------PFFATGFGASPF 391
+++Y++L VGKNA E +K+AYRKLA+KWHPDKNP NK+EAE FK +SEAY VLSDPQKR YD YG DG+ + PG G P D FA FG+SPF
Sbjct: 32 VDYYNILKVGKNASEEDLKKAYRKLAMKWHPDKNPTNKKEAEAKFKKISEAYEVLSDPQKRGVYDQYGEDGLKGMPP---------------PGSSGGPNDVHFNPRNAEDIFAEFFGSSPF 138
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Match: A0A7S3JK23_9SPIT (Hypothetical protein n=2 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JK23_9SPIT) HSP 1 Score: 112 bits (280), Expect = 8.520e-28 Identity = 51/84 (60.71%), Postives = 68/84 (80.95%), Query Frame = 2
Query: 26 FNEKATMDNI---NFYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLVSEAYSVLSDPQKRQAYDLYGRDGV 268
F + TM N+ +FY++LGV K A +++IK+AYRKLA+KWHPDKNPDNKEEAEE FK ++EAY VLSD KR+ YD+YG++G+
Sbjct: 5 FRKTHTMANLKSDDFYEILGVSKEASDAEIKKAYRKLAIKWHPDKNPDNKEEAEENFKKIAEAYEVLSDANKRKTYDMYGKEGL 88 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig112.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig112.33.1 >prot_H-akashiwo_Contig112.33.1 ID=prot_H-akashiwo_Contig112.33.1|Name=mRNA_H-akashiwo_Contig112.33.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=117bp MDNINFYDVLGVGKNADESQIKQAYRKLAVKWHPDKNPDNKEEAEEIFKLback to top mRNA from alignment at H-akashiwo_Contig112:746561..747385+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig112.33.1 ID=mRNA_H-akashiwo_Contig112.33.1|Name=mRNA_H-akashiwo_Contig112.33.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=825bp|location=Sequence derived from alignment at H-akashiwo_Contig112:746561..747385+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig112:746561..747385+ >mRNA_H-akashiwo_Contig112.33.1 ID=mRNA_H-akashiwo_Contig112.33.1|Name=mRNA_H-akashiwo_Contig112.33.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=351bp|location=Sequence derived from alignment at H-akashiwo_Contig112:746561..747385+ (Heterosigma akashiwo CCMP452)back to top |