mRNA_H-akashiwo_Contig1102.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: A0A7S3Y431_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y431_HETAK) HSP 1 Score: 286 bits (732), Expect = 2.340e-93 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1
Query: 154 RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 582
RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF
Sbjct: 238 RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 380
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: A0A7S4DC66_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC66_HETAK) HSP 1 Score: 286 bits (732), Expect = 6.070e-91 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1
Query: 154 RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 582
RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF
Sbjct: 435 RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 577
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: A0A7S3Y454_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y454_HETAK) HSP 1 Score: 286 bits (732), Expect = 3.420e-89 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1
Query: 154 RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 582
RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF
Sbjct: 611 RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 753
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: A0A6V1VJZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJZ2_HETAK) HSP 1 Score: 253 bits (646), Expect = 1.060e-76 Identity = 121/152 (79.61%), Postives = 137/152 (90.13%), Query Frame = 1
Query: 154 RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKP 609
RT KGMVFGG+RDY +R++SDSDHGNCPD+GRSTSG+ VF G SLI+HKSKLQHITTL A EAELVALVL+ICEA+WV +MLW+L+ R ++AYTDCMAVVHMANHQK LQRTRHLNIKRHFL DEVSE+RLSVEHIPGK+NFTDVFTKP
Sbjct: 567 RTPGKGMVFGGSRDYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKP 718
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: A0A6V1TGB8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGB8_HETAK) HSP 1 Score: 211 bits (538), Expect = 2.860e-62 Identity = 108/155 (69.68%), Postives = 124/155 (80.00%), Query Frame = 1
Query: 154 RTASKGMVFGG--ARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 612
RTA GMVFGG Y +R+V+DSDHG CPDT RSTSG+ V++G SLI+HKSKLQH+ TLS+AEAELVAL+LA+CEAKWV ML L R R + AYTD MAVV MAN Q+HLQRTRHLNIKRHFLKDEV+E RLSV H+ GK N D+FTKPL
Sbjct: 390 RTADMGMVFGGRGGNPYEIRIVTDSDHGMCPDTARSTSGVSVYIGHSLIIHKSKLQHLVTLSSAEAELVALILAVCEAKWVRGMLTALTRRRPHMTAYTDSMAVVQMANQQQHLQRTRHLNIKRHFLKDEVAEGRLSVRHVRGKENTADIFTKPL 544
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: UPI001C272154 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C272154) HSP 1 Score: 105 bits (263), Expect = 1.600e-23 Identity = 54/153 (35.29%), Postives = 89/153 (58.17%), Query Frame = 1
Query: 157 TASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWEL-LRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 612
T G+ + G D ++ + SD+D CPDT RS SG +F+G SLI KSK QH + S+AE E +++ LA CE W+ ++L + + ++ + Y D A VH++++ +RT+H+ I H ++D++ E + H+ D+FTKPL
Sbjct: 209 TVGHGLFYSGQADLSLSIFSDADWAGCPDTRRSISGFCLFLGTSLISWKSKKQHTVSRSSAEDEYMSMALACCEVVWIIALLKDFGINMQQPIPLYCDSQAAVHISSNPVFHERTKHIEIDCHTVRDKILEGVIKTVHVHNNNQLADIFTKPL 361
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: UPI0009AB860F (uncharacterized protein LOC109950837 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB860F) HSP 1 Score: 103 bits (257), Expect = 1.720e-22 Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 1
Query: 154 RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWEL-LRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 612
++ +G++ D T+R DSD CP+T RST+G VF+G SLI KSK Q +LS+AEAE ++ A CE W+ S+L +L + R Y D A +H+A + +RTRH+ + HF++D++ E ++ +H+ D+ TK L
Sbjct: 248 KSPGQGILLSSQNDLTLRAFCDSDWAGCPNTRRSTTGYCVFLGSSLISWKSKRQKTVSLSSAEAEYRSMAAACCELSWLRSLLKDLRILHRQFALLYCDNKAALHIAANPVFHERTRHIEMDCHFIRDKIQEGLIATQHVSSSSQLADILTKAL 401
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: O82607_ARATH (T2L5.9 protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=O82607_ARATH) HSP 1 Score: 103 bits (256), Expect = 6.470e-22 Identity = 56/153 (36.60%), Postives = 91/153 (59.48%), Query Frame = 1
Query: 157 TASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVR-AYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 612
T +G+ + D T++ +DSD G CPDT RST+GL +F+G SLI +SK Q + S+AEAE AL LA CE W+ S+L +L + G V ++D A +++A + +RT+H+ I H +++ + + + + H+ + D+ TKPL
Sbjct: 1071 TVGQGLFYSSDPDLTLKGFADSDWGTCPDTRRSTTGLTMFLGSSLITWRSKKQPTVSRSSAEAEYRALALASCEMVWLASLLLDLKIITGSVPIVFSDSTAAIYIATNPVFHERTKHIEIDCHLVRERLDKGLIRMLHVRTEDQVADILTKPL 1223
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: Q9SIM3_ARATH (Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9SIM3_ARATH) HSP 1 Score: 103 bits (256), Expect = 6.590e-22 Identity = 56/152 (36.84%), Postives = 89/152 (58.55%), Query Frame = 1
Query: 157 TASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 612
T +G+ + D T++ +D+D G CPD+ RST+G +FVG SLI +SK Q + S+AEAE AL LA CE W+ ++L L G+ Y+D A V++A + +RT+H+ I H +++++ +L + H+ K D+ TKPL
Sbjct: 1288 TVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRVHSGVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPL 1439
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Match: UPI000B8F4AFE (uncharacterized mitochondrial protein AtMg00810-like n=3 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F4AFE) HSP 1 Score: 101 bits (251), Expect = 8.430e-22 Identity = 54/155 (34.84%), Postives = 93/155 (60.00%), Query Frame = 1
Query: 157 TASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWEL---LRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 612
TAS G+ G D+++R +D+D CPDT RSTSG V++G +L+ SK Q + + S+AEAE + + E W+ ++L +L +R G+V + D ++ V+++ + QRT+H+ + HF+++ V ++ V H+P +F D+FTK L
Sbjct: 210 TASFGLTLGSIGDFSLRAYTDADWAGCPDTRRSTSGYCVYLGSNLLSWSSKRQAVVSRSSAEAEYRGVANVVAELSWLRNLLLDLHKPMRKAGIV--FCDNISAVYLSGNPVQHQRTKHIELDIHFVRELVKRGQVRVLHVPSRFQIADIFTKGL 362 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1102.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1102.3.1 >prot_H-akashiwo_Contig1102.3.1 ID=prot_H-akashiwo_Contig1102.3.1|Name=mRNA_H-akashiwo_Contig1102.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=204bp TSIPTSLWLGLSSSSGSLGLTSALRSASCPSSSCLPTLTIWMLPCTLLVIback to top mRNA from alignment at H-akashiwo_Contig1102:65581..66192+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1102.3.1 ID=mRNA_H-akashiwo_Contig1102.3.1|Name=mRNA_H-akashiwo_Contig1102.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=612bp|location=Sequence derived from alignment at H-akashiwo_Contig1102:65581..66192+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1102:65581..66192+ >mRNA_H-akashiwo_Contig1102.3.1 ID=mRNA_H-akashiwo_Contig1102.3.1|Name=mRNA_H-akashiwo_Contig1102.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=612bp|location=Sequence derived from alignment at H-akashiwo_Contig1102:65581..66192+ (Heterosigma akashiwo CCMP452)back to top |