mRNA_H-akashiwo_Contig11.79.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: A0A7S4DI41_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DI41_HETAK) HSP 1 Score: 330 bits (846), Expect = 8.190e-114 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 2
Query: 122 MPQDPPPPDEGDPFDLVFHVGASGLEEDTDSERLLEAIRTLRSRLENECSINEAGELYEEFRGWCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGFDRWKRPVVVLDNAAENERDPTAIVTHTAFNLEFAVA 601
MPQDPPPPDEGDPFDLVFHVGASGLEEDTDSERLLEAIRTLRSRLENECSINEAGELYEEFRGWCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGFDRWKRPVVVLDNAAENERDPTAIVT+TAFNLEFAVA
Sbjct: 1 MPQDPPPPDEGDPFDLVFHVGASGLEEDTDSERLLEAIRTLRSRLENECSINEAGELYEEFRGWCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGFDRWKRPVVVLDNAAENERDPTAIVTYTAFNLEFAVA 160
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: A0A218WPL3_PUNGR (CRAL-TRIO domain-containing protein n=3 Tax=Punica granatum TaxID=22663 RepID=A0A218WPL3_PUNGR) HSP 1 Score: 71.6 bits (174), Expect = 2.170e-11 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 2
Query: 200 EDTDSERLLEAIRTLRSRLENECSINEAGELYEEFRGWCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGF-DRWKRPVVVLDNAAENERDPTAIVTHTAFNLEFAV 598
ED DS + E + LR+ L G L +CTDSCLRR++VAR + +KA +ML E++KWR +P + P + + G TGK A F DR+ R V+++ +N P + H + +E ++
Sbjct: 14 EDDDSHKA-EKVSELRAAL---------GSLSGRSLKYCTDSCLRRYLVARNWNVNKARKMLEESIKWRESYKPEEIRW--PEVAHEGETGKVSRANFFDRFGRTVLIMRPGKQNTASPEGNIRHLVYIIENSI 135
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: A0A8J5FAZ3_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FAZ3_ZINOF) HSP 1 Score: 71.6 bits (174), Expect = 4.560e-11 Identity = 47/134 (35.07%), Postives = 67/134 (50.00%), Query Frame = 2
Query: 200 EDTDSERLLEAIRTLRSRLENECSINEAGELYEEFRGWCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGF-DRWKRPVVVLDNAAENERDPTAIVTHTAFNLEFAV 598
+D D+E E I LR+ E G L +CTD CLRR++VARK D K+ +ML E ++WR +P + + + G TGK Y A F DR R V+V+ A +N + H + LE A+
Sbjct: 12 QDHDAENQEEKIEELRA---------EIGPLEGRSLKYCTDECLRRYLVARKWDVGKSKKMLEETVEWRSSYKPEEIRWRE--VAEEGETGKVYRADFRDREGRTVIVMRPAKQNTNSQENQLRHLVYLLENAI 134
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: A0A8J5KRL0_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5KRL0_ZINOF) HSP 1 Score: 70.1 bits (170), Expect = 6.390e-11 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 2
Query: 278 EAGELYEEFRGWCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGF-DRWKRPVVVLDNAAENERDPTAIVTHTAFNLEFAV 598
E G L +CTD CLRR++VARK D K+ +ML E ++WR +P + + + G TGKAY A F DR R V+V+ A +N + H + LE A+
Sbjct: 29 EIGPLEGRSLKYCTDECLRRYLVARKWDVAKSKKMLEETVEWRSSYKPEEIRWRE--VAEEGETGKAYRADFHDREGRTVIVMRPAKQNTSSQENQLRHLVYLLENAI 134
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: A0A7N0UC19_KALFE (CRAL-TRIO domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UC19_KALFE) HSP 1 Score: 68.6 bits (166), Expect = 2.690e-10 Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 2
Query: 311 WCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGF-DRWKRPVVVLDNAAENERDPTAIVTHTAFNLEFAV 598
+C+D+CLRR++VAR + DKA +ML + L+WR +P ++ P + G TGK IA F DR R V+++ A E P + H + +E AV
Sbjct: 39 YCSDACLRRYLVARSWNVDKAKKMLEDTLQWRASYKPEEITW--PEVAFEGETGKVSIANFHDRLGRTVLIMRPAFETSTSPEGNIRHLFYLIENAV 133
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: A0A7S0KQ81_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KQ81_9CHLO) HSP 1 Score: 68.9 bits (167), Expect = 3.390e-10 Identity = 43/121 (35.54%), Postives = 64/121 (52.89%), Query Frame = 2
Query: 227 EAIRTLRSRLENECSINEAGELYEEFRGWCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGFDRWKRPVVVLDNAAENERDPTAIVTHTAFNLE 589
+A+ LR +LE + A E R + DSCL R++ ARK DKA +ML+E LKWR +P ++ D I N +TGK Y +G + +R V+V+ EN + T + + LE
Sbjct: 156 DAMNALRLKLERCAKDDPALLSTPELRAFVDDSCLCRYLRARKWKIDKALKMLVETLKWRATMKPESITWND--IANEAKTGKQYRSGRCKRERRVLVMRPDRENTFNHTENIKFLVYMLE 274
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: A0A0A0KWJ1_CUCSA (CRAL-TRIO domain-containing protein n=10 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KWJ1_CUCSA) HSP 1 Score: 67.8 bits (164), Expect = 4.940e-10 Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 2
Query: 257 ENECSINEA----GELYEEFRGWCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGF-DRWKRPVVVLDNAAENERDPTAIVTHTAFNLEFAV 598
+ E INE G L +CTD+CLRR+++AR + +K+ +ML E LKWR +P + ++ A G TGK A F DR R V+++ +N A V H + LE A+
Sbjct: 15 QEEGKINELRAALGPLSSRSSKYCTDACLRRYLIARNWNVEKSRKMLEETLKWRAAYKPEEIGWDEVAFE--GETGKVSRANFYDRHGRSVLIMRPGMQNTTPSEASVRHLVYLLENAI 131
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: A0A6J1BUF7_MOMCH (random slug protein 5-like n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1BUF7_MOMCH) HSP 1 Score: 67.0 bits (162), Expect = 9.440e-10 Identity = 37/103 (35.92%), Postives = 56/103 (54.37%), Query Frame = 2
Query: 284 GELYEEFRGWCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGF-DRWKRPVVVLDNAAENERDPTAIVTHTAFNLE 589
G+L +C+D CLRR++VAR D K+ +M+ ++LKWR +P + + + + G TGKAY A F DR R V++ +N P V H + LE
Sbjct: 35 GQLSGRSVKYCSDECLRRYLVARNWDVHKSNKMMEDSLKWRATYKPEEIRWHE--VAHEGETGKAYRANFYDRLGRTVLISRPGMQNTNSPEDNVRHVVYLLE 135
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: A0A7N0T844_KALFE (CRAL-TRIO domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0T844_KALFE) HSP 1 Score: 67.0 bits (162), Expect = 9.580e-10 Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 2
Query: 311 WCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGF-DRWKRPVVVLDNAAENERDPTAIVTHTAFNLEFAVARWA 610
+CTD+CLRR++VAR + +KA +ML + L+WR +P ++ P + G TGK IA F DR R VV++ +N + H + +E AV A
Sbjct: 39 YCTDACLRRYLVARNWNVEKAKKMLEDTLQWRASYKPEEITW--PEVAFEGETGKVSIANFHDRLGRTVVIMRPGLQNSTSTEGNIRHLFYLIEKAVLNLA 137
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Match: UPI0009014AC3 (random slug protein 5-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009014AC3) HSP 1 Score: 67.0 bits (162), Expect = 9.650e-10 Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 2
Query: 311 WCTDSCLRRFIVARKGDTDKAFEMLIEALKWRHKRQPHLLSAEDPAIMNGGRTGKAYIAGF-DRWKRPVVVLDNAAENERDPTAIVTHTAFNLEFAV 598
+CTD+CL+R++VAR + DKA +ML E LKWR +P + + A+ G TGK + AGF DR R V++L +N + H + +E A+
Sbjct: 38 YCTDACLKRYLVARSWNVDKAKKMLEETLKWRSTFKPEEIRWHEVAME--GETGKLFRAGFHDRHGRTVLILRPGMQNTTSIENQMKHLVYLIENAI 132 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.79.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.79.1 >prot_H-akashiwo_Contig11.79.1 ID=prot_H-akashiwo_Contig11.79.1|Name=mRNA_H-akashiwo_Contig11.79.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=165bp MPQDPPPPDEGDPFDLVFHVGASGLEEDTDSERLLEAIRTLRSRLENECSback to top mRNA from alignment at H-akashiwo_Contig11:3378250..3379615+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig11.79.1 ID=mRNA_H-akashiwo_Contig11.79.1|Name=mRNA_H-akashiwo_Contig11.79.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1366bp|location=Sequence derived from alignment at H-akashiwo_Contig11:3378250..3379615+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig11:3378250..3379615+ >mRNA_H-akashiwo_Contig11.79.1 ID=mRNA_H-akashiwo_Contig11.79.1|Name=mRNA_H-akashiwo_Contig11.79.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=495bp|location=Sequence derived from alignment at H-akashiwo_Contig11:3378250..3379615+ (Heterosigma akashiwo CCMP452)back to top |