prot_H-akashiwo_Contig11.18.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig11.18.1
Unique Nameprot_H-akashiwo_Contig11.18.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length275
Homology
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3Y954_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y954_HETAK)

HSP 1 Score: 220 bits (561), Expect = 7.920e-70
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0
Query:  121 DEVQRRVGRIFTDGSKQDEGVGAAFVVMDGQGRVLATGLLRLSPWATLEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITAQAVRLAGDCHSLVYVPGHQGIPGNEEAD 232
            DEVQRRVGRIFTDGSKQDEGVGAAFVV+DGQGRVLATGLLRLSPWATLEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITA+ VRLAGDCHSLVYVPGHQGI GN EAD
Sbjct:    1 DEVQRRVGRIFTDGSKQDEGVGAAFVVVDGQGRVLATGLLRLSPWATLEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITAEVVRLAGDCHSLVYVPGHQGILGNGEAD 112          
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S4D4N8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4N8_HETAK)

HSP 1 Score: 192 bits (487), Expect = 5.970e-59
Identity = 93/104 (89.42%), Postives = 96/104 (92.31%), Query Frame = 0
Query:   56 IAFIFSGSFEKFILPHLWHVRQLLQSAGIRLDWSFERRVQNYEMGYPPHRGEVRVVLGTRDSWAEDEVQRRVGRIFTDGSKQDEGVGAAFVVMDGQGRVLATGL 159
            IAFIFSGSFEKFILPHLWHVR LL SAGI LDW FERR QN+EM YPPHR EVRVVLGTRDSWA+DEV RRVGRIFTDGSK+DEGVGAAFVVMDGQGRVLATGL
Sbjct:    1 IAFIFSGSFEKFILPHLWHVRHLLMSAGISLDWRFERRAQNHEMDYPPHRVEVRVVLGTRDSWAQDEVLRRVGRIFTDGSKRDEGVGAAFVVMDGQGRVLATGL 104          
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S4DA35_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA35_HETAK)

HSP 1 Score: 171 bits (432), Expect = 1.910e-49
Identity = 86/122 (70.49%), Postives = 92/122 (75.41%), Query Frame = 0
Query:  168 LEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITAQAVRLAGDCHSLVYVPGHQGIPGNEEAD--------------LDVPRAHTRRLARDYLWGQWEREWASTGSPADLLPVYKRFARS 275
            LEWC   QQE GW+VASDS AVLSNVLSQ RLTPITA+ VRLAGDCHSLVYVP H+GIPGNEEAD              +DVPRAHTRRLA DY WG+WEREW + GS AD  PVYKRFA S
Sbjct:    4 LEWCPDLQQEGGWIVASDSRAVLSNVLSQCRLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGTYALVDVPRAHTRRLAGDYFWGEWEREWGNAGS-ADPPPVYKRFAPS 124          
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S4DA87_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA87_HETAK)

HSP 1 Score: 171 bits (432), Expect = 5.040e-49
Identity = 86/122 (70.49%), Postives = 92/122 (75.41%), Query Frame = 0
Query:  168 LEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITAQAVRLAGDCHSLVYVPGHQGIPGNEEAD--------------LDVPRAHTRRLARDYLWGQWEREWASTGSPADLLPVYKRFARS 275
            LEWC   QQE GW+VASDS AVLSNVLSQ RLTPITA+ VRLAGDCHSLVYVP H+GIPGNEEAD              +DVPRAHTRRLA DY WG+WEREW + GS AD  PVYKRFA S
Sbjct:    4 LEWCPDLQQEGGWIVASDSRAVLSNVLSQCRLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGTYALVDVPRAHTRRLAGDYFWGEWEREWGNAGS-ADPPPVYKRFAPS 124          
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3Y0X2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0X2_HETAK)

HSP 1 Score: 171 bits (432), Expect = 2.070e-48
Identity = 86/122 (70.49%), Postives = 92/122 (75.41%), Query Frame = 0
Query:  168 LEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITAQAVRLAGDCHSLVYVPGHQGIPGNEEAD--------------LDVPRAHTRRLARDYLWGQWEREWASTGSPADLLPVYKRFARS 275
            LEWC   QQE GW+VASDS AVLSNVLSQ RLTPITA+ VRLAGDCHSLVYVP H+GIPGNEEAD              +DVPRAHTRRLA DY WG+WEREW + GS AD  PVYKRFA S
Sbjct:    4 LEWCPDLQQEGGWIVASDSRAVLSNVLSQCRLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGTYALVDVPRAHTRRLAGDYFWGEWEREWGNAGS-ADPPPVYKRFAPS 124          
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S4DAI0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAI0_HETAK)

HSP 1 Score: 159 bits (403), Expect = 3.440e-46
Identity = 78/107 (72.90%), Postives = 82/107 (76.64%), Query Frame = 0
Query:  168 LEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITAQAVRLAGDCHSLVYVPGHQGIPGNEEAD--------------LDVPRAHTRRLARDYLWGQWEREWASTG 260
            LEWC   QQE GW+VASDS AVLSNVLSQ RLTPITA+ VRLAGDCHSLVYVP H+GIPGNEEAD              +DVPRAHTRRLA DY WGQWEREWAS G
Sbjct:    4 LEWCPDLQQEGGWIVASDSRAVLSNVLSQCRLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGIYAPVDVPRAHTRRLAGDYFWGQWEREWASNG 110          
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3XPL3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPL3_HETAK)

HSP 1 Score: 164 bits (416), Expect = 5.920e-45
Identity = 80/91 (87.91%), Postives = 83/91 (91.21%), Query Frame = 0
Query:   69 LPHLWHVRQLLQSAGIRLDWSFERRVQNYEMGYPPHRGEVRVVLGTRDSWAEDEVQRRVGRIFTDGSKQDEGVGAAFVVMDGQGRVLATGL 159
            LP LWHVRQLLQ AGI LDW FERR QN+EM YPPHR EVRVVLGTRDSWA+DEV RRVGRIFTDGSK+DEGVGAAFVVMDGQGRVLATGL
Sbjct:  279 LPPLWHVRQLLQPAGISLDWRFERRAQNHEMDYPPHRVEVRVVLGTRDSWAQDEVLRRVGRIFTDGSKRDEGVGAAFVVMDGQGRVLATGL 369          
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3Y8S2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8S2_HETAK)

HSP 1 Score: 169 bits (428), Expect = 1.290e-44
Identity = 104/236 (44.07%), Postives = 139/236 (58.90%), Query Frame = 0
Query:   70 PHLWHVRQLLQSAGIRLDWSFERRVQNYEMGYPPHRGEVRVVLGTRDSWAEDEVQ-RRVGRIFTDGSKQDEG-VGAAFVVMDGQGRVLATGLLRLSPWATLEWCRGHQQE----------RG--WVVASDSCAVLSNVLSQRRLTPITAQAVRLAGDCHSLVYVPGHQGIPGNEEAD--------------LDVPRAHTRRLARDYLWGQWEREWAST--GSPADLLP--VYKRFA 273
            PHL  VR+ L+ AG+ L  +FER + ++E+ YPP R  V+V LG+RD+WAE+ ++  R GRIFTDGSK ++G VGAAFV  + +GR +  GL RL  + T+    G  Q           RG  W+VASDS AVL+ + S RR+T + ++  +   D HS VY+PGHQG  GNE AD              +DVPRA TRRLA++  WG W +EW     GS  D+     Y RFA
Sbjct:  317 PHLRFVRETLEEAGVDLQGTFERIMLDHELPYPPLRTAVKVTLGSRDAWAEELLEGARGGRIFTDGSKLEDGSVGAAFVAFNRRGREVGRGLYRLPHYCTVYQAEGLAQRESARWTKEPGRGGEWMVASDSLAVLACLKSGRRMTRLVSEIAQEVEDRHSFVYIPGHQGHEGNEVADQLAKEAANAGIEVEVDVPRAFTRRLAKERTWGVWAQEWRDLEHGSGMDMGEDKAYLRFA 552          
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3Y0T4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0T4_HETAK)

HSP 1 Score: 149 bits (375), Expect = 8.990e-42
Identity = 77/108 (71.30%), Postives = 82/108 (75.93%), Query Frame = 0
Query:  182 VASDSCAVLSNVLSQRRLTPITAQAVRLAGDCHSLVYVPGHQGIPGNEEAD--------------LDVPRAHTRRLARDYLWGQWEREWASTGSPADLLPVYKRFARS 275
            VASDS AVLSNVLSQ RLTPITA+ VRLAGDCHSLVYVP H+GIPGNEEAD              +DVPRAHTRRLA DY WG+WEREW + GS AD  PVYKRFA S
Sbjct:    1 VASDSRAVLSNVLSQCRLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGIYAPVDVPRAHTRRLAGDYFWGEWEREWGNAGS-ADPPPVYKRFAPS 107          
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3XUZ3_HETAK (Hypothetical protein (Fragment) n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUZ3_HETAK)

HSP 1 Score: 151 bits (382), Expect = 9.030e-41
Identity = 81/185 (43.78%), Postives = 114/185 (61.62%), Query Frame = 0
Query:   70 PHLWHVRQLLQSAGIRLDWSFERRVQNYEMGYPPHRGEVRVVLGTRDSWAEDEVQRR--VGRIFTDGSKQDEGVGAAFVVMDGQGRVLATGLLRLSPWAT------------LEWCR--GHQQERGWVVASDSCAVLSNVLSQRRLTPITAQAVRLAGDCHSLVYVPGHQGIPGNEEADLDVPRA 238
            PHL  VRQL+  AG+ L  SFERR+ ++E+ YPP R  + + LG ++ WAE+ +Q R  VG ++TDGSK++ GVGAAFV  D +G+ +  GL +L  + +            + W +  GH   + WV+ASD  AVL+++  QRR+T +  + VR A D HS VYVPGHQG  GNE AD    +A
Sbjct:   93 PHLAFVRQLMLEAGVELGGSFERRLVDWELPYPPERKSLDITLGRKEEWAEELIQPRPGVGVVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVVQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQGHAGNEVADALAKKA 277          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y954_HETAK7.920e-7095.54Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4D4N8_HETAK5.970e-5989.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DA35_HETAK1.910e-4970.49Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4DA87_HETAK5.040e-4970.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y0X2_HETAK2.070e-4870.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DAI0_HETAK3.440e-4672.90Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3XPL3_HETAK5.920e-4587.91Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y8S2_HETAK1.290e-4444.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y0T4_HETAK8.990e-4271.30Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XUZ3_HETAK9.030e-4143.78Hypothetical protein (Fragment) n=4 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 119..233
e-value: 2.1E-7
score: 33.2
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 124..240
score: 8.714931
NoneNo IPR availableCDDcd09276Rnase_HI_RT_non_LTRcoord: 129..245
e-value: 8.234E-19
score: 78.4136
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 128..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig11contigH-akashiwo_Contig11:561956..562822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig11.18.1mRNA_H-akashiwo_Contig11.18.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig11 560112..562822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig11.18.1 ID=prot_H-akashiwo_Contig11.18.1|Name=mRNA_H-akashiwo_Contig11.18.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=275bp
MWLIQVSFLSKITPGMSAPNGMECPCHSGISWQSSTVSGTAMSLPLWPSL
QVVKAIAFIFSGSFEKFILPHLWHVRQLLQSAGIRLDWSFERRVQNYEMG
YPPHRGEVRVVLGTRDSWAEDEVQRRVGRIFTDGSKQDEGVGAAFVVMDG
QGRVLATGLLRLSPWATLEWCRGHQQERGWVVASDSCAVLSNVLSQRRLT
PITAQAVRLAGDCHSLVYVPGHQGIPGNEEADLDVPRAHTRRLARDYLWG
QWEREWASTGSPADLLPVYKRFARS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR002156RNaseH_domain
IPR012337RNaseH-like_sf