mRNA_H-akashiwo_Contig11.18.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3Y8X9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8X9_HETAK) HSP 1 Score: 495 bits (1275), Expect = 2.720e-166 Identity = 249/281 (88.61%), Postives = 260/281 (92.53%), Query Frame = 3
Query: 297 HVECIALLKEF*PIFGNGREKAGPLLQFHPGETEVTREAQRWTESDNWRSSRVLVAADTNAKSHLRHSGKEESCGRELEAFILGHGLAVVNCESPHFTFKGAQGSSNIDLTLAGHSLAQHITGWRVLGGESVADHNYVRFDLDLRNRFPSASREISKYVLRRMDVSLLRERAKEELAAAVAAGRLGIPLLDPTTVDTAVAALAEAQWGAFQAATPLKRRKSWKKAVPWWTPELSALKVRFRRARKKRRRSAQHEEEFQCERLALNQAMCTAKRPSWRKFCS 1139
H+EC AL+KEF PIFGNGREKAGPLLQFHPGETEVTREAQRWTESDNWRSSRVLVAADTNAKSHL HSG+E+ G+ELEAFILG GLAVVN SPHFTF+GAQ SSNIDLTLAGHSLAQHITGWRVLGGESVADHNYV FDLDL NR PSASR+ISKY LRRMDV LLRERAKEELAAAVAAGRLG+PLLDPTTVDTAVAALAEA WGAFQAATPLKRRK+WKKAVPWWTPE+S LK RFRRARKKRRRSAQHEEEFQ ERLA N+AM TAKR SWRKFCS
Sbjct: 43 HLECTALVKEFQPIFGNGREKAGPLLQFHPGETEVTREAQRWTESDNWRSSRVLVAADTNAKSHLWHSGREDGRGQELEAFILGQGLAVVNRVSPHFTFEGAQESSNIDLTLAGHSLAQHITGWRVLGGESVADHNYVCFDLDLGNRLPSASRKISKYALRRMDVILLRERAKEELAAAVAAGRLGVPLLDPTTVDTAVAALAEALWGAFQAATPLKRRKAWKKAVPWWTPEISVLKTRFRRARKKRRRSAQHEEEFQRERLAFNRAMRTAKRRSWRKFCS 323
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S4DEI5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEI5_HETAK) HSP 1 Score: 428 bits (1101), Expect = 3.000e-141 Identity = 219/257 (85.21%), Postives = 232/257 (90.27%), Query Frame = 3
Query: 369 LLQFHPGETEVTREAQRWTESDNWRSSRVLVAADTNAKSHLRHSGKEESCGRELEAFILGHGLAVVNCESPHFTFKGAQGSSNIDLTLAGHSLAQHITGWRVLGGESVADHNYVRFDLDLRNRFPSASREISKYVLRRMDVSLLRERAKEELAAAVAAGRLGIPLLDPTTVDTAVAALAEAQWGAFQAATPLKRRKSWKKAVPWWTPELSALKVRFRRARKKRRRSAQHEEEFQCERLALNQAMCTAKRPSWRKFCS 1139
+ + +TEVT EAQRWTESDNW+SSRVLVAADTNAKSHL HSG+E+ G+ELEAFILG GLAVVN SPHFTF+GAQGSSNIDLTLAGHSLAQ ITGWRVLGGESVADHNYV FDLDL NR PSASR+ISKY LRRMDV LLRERAKEELAAAVAAGRLG+PLLDPTTVDTAVAALAEA WGAFQAATPLKRRK+WKKAVPWWTPE+S LK RFRRARKKRRRSAQHEEEFQ ERLA N+AM TAKR SWRKFCS
Sbjct: 1 VCSYMAKDTEVTWEAQRWTESDNWKSSRVLVAADTNAKSHLWHSGREDGRGQELEAFILGQGLAVVNRVSPHFTFEGAQGSSNIDLTLAGHSLAQRITGWRVLGGESVADHNYVCFDLDLGNRLPSASRKISKYALRRMDVILLRERAKEELAAAVAAGRLGVPLLDPTTVDTAVAALAEALWGAFQAATPLKRRKAWKKAVPWWTPEISVLKTRFRRARKKRRRSAQHEEEFQRERLAFNRAMRTAKRRSWRKFCS 257
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3Y2N9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2N9_HETAK) HSP 1 Score: 366 bits (940), Expect = 3.530e-118 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = -2
Query: 1505 KINFSKDPEKMKAIAFTTCRDGQRGKDIAVPDTVLDCQDIPEWHGHSIPFGADIPGVILDRKLTWISHIEACTKKAKQLAVAMASCARAKWGLGRRVVQQIYKGAVEPIMLNGVVAWAAALSKRGAQRRLRSVQRLAALAMTGCFRTTSTNAALALAGLLPAEMAAGKLPVQQYCHGPLSRR 2050
KINFSKDPEKMKAIAFTTCRDGQRGKDIAVPDTVLDCQDIPEWHGHSIPFGADIPGVILDRKLTWISHIEACTKKAKQLAVAMASCARAKWGLGRRVVQQIYKGAVEPIMLNGVVAWAAALSKRGAQRRLRSVQRLAALAMTGCFRTTSTNAALALAGLLPAEMAAGKLPVQQYCHGPLSRR
Sbjct: 17 KINFSKDPEKMKAIAFTTCRDGQRGKDIAVPDTVLDCQDIPEWHGHSIPFGADIPGVILDRKLTWISHIEACTKKAKQLAVAMASCARAKWGLGRRVVQQIYKGAVEPIMLNGVVAWAAALSKRGAQRRLRSVQRLAALAMTGCFRTTSTNAALALAGLLPAEMAAGKLPVQQYCHGPLSRR 198
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3Y8X7_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8X7_HETAK) HSP 1 Score: 338 bits (868), Expect = 1.820e-105 Identity = 170/198 (85.86%), Postives = 179/198 (90.40%), Query Frame = -2
Query: 1463 KINFSKDPEKMKAIAFTTCRDGQRGKDIAVPDTVLDCQDIPEWHGHSIPFGADIP--GVILDRKLTWISHIEACTKKAKQLAVAMASCARAKWGLGRRVVQQIYKGAVEPIMLNGVVAWAAALSKRGAQRRLRSVQRLAALAMTGCFRTTSTNAALALAGLLPAEMAAGKLPVQQYCHGPLSRRLEIICTPCKWSSGL 2050
KINFSKDPEKMKA+AFTTCR+G RGKDI VP VLDCQD+PEWHGHSIP ++ GVILDRKLTW SHIEACTKKAKQLAVAM SCARAKWGLGR VV+QIYKGAVEPIMLNGVVAWAAAL K+GAQRRLRSVQRLAALAMTGCFRTTST AALALAGLLPAEMAAGK+ VQQYCHGP+SRRLEII TPCKWS L
Sbjct: 127 KINFSKDPEKMKAMAFTTCREGHRGKDIVVPAIVLDCQDMPEWHGHSIPVADELTFLGVILDRKLTWASHIEACTKKAKQLAVAMTSCARAKWGLGRSVVKQIYKGAVEPIMLNGVVAWAAALPKKGAQRRLRSVQRLAALAMTGCFRTTSTKAALALAGLLPAEMAAGKVLVQQYCHGPMSRRLEIIRTPCKWSPHL 324
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S4DEH0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEH0_HETAK) HSP 1 Score: 317 bits (813), Expect = 6.920e-99 Identity = 160/188 (85.11%), Postives = 169/188 (89.89%), Query Frame = -2
Query: 1463 MKAIAFTTCRDGQRGKDIAVPDTVLDCQDIPEWHGHSIPFGADIP--GVILDRKLTWISHIEACTKKAKQLAVAMASCARAKWGLGRRVVQQIYKGAVEPIMLNGVVAWAAALSKRGAQRRLRSVQRLAALAMTGCFRTTSTNAALALAGLLPAEMAAGKLPVQQYCHGPLSRRLEIICTPCKWSSGL 2020
MKA+AFTTCR+G RGKDI VP VLDCQD+PEWHGHSIP ++ GVILDRKLTW SHIEACTKKAKQLAVAM SCARAKWGLGR VV+QIYKGAVEPIMLNGVVAWAAAL K+GAQRRLRSVQRLAALAMTGCFRTTST AALALAGLLPAEMAAGK+ VQQYCHGP+SRRLEII TPCKWS L
Sbjct: 1 MKAMAFTTCREGHRGKDIVVPAIVLDCQDMPEWHGHSIPVADELTFLGVILDRKLTWASHIEACTKKAKQLAVAMTSCARAKWGLGRSVVKQIYKGAVEPIMLNGVVAWAAALPKKGAQRRLRSVQRLAALAMTGCFRTTSTKAALALAGLLPAEMAAGKVLVQQYCHGPMSRRLEIIRTPCKWSPHL 188
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3Y8U4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U4_HETAK) HSP 1 Score: 244 bits (623), Expect = 1.620e-72 Identity = 123/149 (82.55%), Postives = 132/149 (88.59%), Query Frame = 3
Query: 369 LLQFHPGETEVTREAQRWTESDNWRSSRVLVAADTNAKSHLRHSGKEESCGRELEAFILGHGLAVVNCESPHFTFKGAQGSSNIDLTLAGHSLAQHITGWRVLGGESVADHNYVRFDLDLRNRFPSASREISKYVLRRMDVSLLRERAK 815
+ + +TEVT EAQRWTESDNW+SSRVLVAADTNAKSHL HSG+E+ G+ELEAFILG GLAVVN SPHFTF+GAQ SSNIDLTLAGHSLAQHITGWRVLGGESVADHNYV FDLDL NR PSASR+ISKY LRRMDVSLLRERAK
Sbjct: 1 VCSYMAKDTEVTWEAQRWTESDNWKSSRVLVAADTNAKSHLWHSGREDGRGQELEAFILGQGLAVVNRVSPHFTFEGAQESSNIDLTLAGHSLAQHITGWRVLGGESVADHNYVCFDLDLGNRLPSASRKISKYALRRMDVSLLRERAK 149
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3Y954_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y954_HETAK) HSP 1 Score: 220 bits (561), Expect = 5.750e-64 Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 3
Query: 2205 DEVQRRVGRIFTDGSKQDEGVGAAFVVMDGQGRVLATGLLRLSPWATLEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITAQAVRLAGDCHSLVYVPGHQGIPGNEEAD 2540
DEVQRRVGRIFTDGSKQDEGVGAAFVV+DGQGRVLATGLLRLSPWATLEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITA+ VRLAGDCHSLVYVPGHQGI GN EAD
Sbjct: 1 DEVQRRVGRIFTDGSKQDEGVGAAFVVVDGQGRVLATGLLRLSPWATLEWCRGHQQERGWVVASDSCAVLSNVLSQRRLTPITAEVVRLAGDCHSLVYVPGHQGILGNGEAD 112
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S3XPL3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPL3_HETAK) HSP 1 Score: 226 bits (577), Expect = 6.120e-63 Identity = 184/453 (40.62%), Postives = 209/453 (46.14%), Query Frame = 3
Query: 966 KAVPWWTPELSALKVRFRRARKKRRRSAQHEEEFQCERLALNQAMCTAKRPSWRKFCSEEKQP-FGRVYNKVLPH*QLPSGAAVQLERELVQLLQAPSPGLSPRGVGPPIYWTTHNDRVAVYVEVGGEALFIGYADDNGFTVEGGPDELDALVELAARVLVSVMKQCRPLDHLHGVQMISSLLDRGPWQYCCTGSFPAAISAGSRPASASAALVEVVRKQPVMARAARRCTLRSLLCAPRLDRAAAHATTPLSMMGSTAPL*ICWTTLRPSPHFARAQLAIATASCLAFFVQASMWLIQVSFLSKITPGMSAPNGMECPCHSGISWQSSTVSGTAMSLPLWPSLQVVKAIAFIFSGSFEKFILPHLWHVRQLLQSAGIRLDWSFERRVQNYEMGYPPHRGEVRVVLGTRDSWAEDEVQRRVGRIFTDGSKQDEGVGAAFVVMDGQGRVLATGL 2321
KAVPWWTPELS LK RFRRARKKRRRS+QHEEE QCE LALN+ M TAK SW KFCSE+KQP F VY +L S + ER + LL P DR A E DA V A V V + ++L + ++ RG AG RPA + KQ R LR + C AA A T M ST+ A+A A L + A L+Q CH+ +S + T+ W LP LWHVRQLLQ AGI LDW FERR QN+EM YPPHR EVRVVLGTRDSWA+DEV RRVGRIFTDGSK+DEGVGAAFVVMDGQGRVLATGL
Sbjct: 59 KAVPWWTPELSVLKTRFRRARKKRRRSSQHEEELQCELLALNRPMHTAKSRSWHKFCSEDKQPPFDGVYKAILQG--RGSNPIIDTERSVSTLLNNLFP-----------------DRAAEASE-------------------------DAAV---AAVQERVERWVSQFENLCSKGAVELIMVRGV--------------AGGRPAG--------LTKQGTARR------LRGVPCL------AALAMTGCFQMTSTSA-------------------ALALAGLLPEEMAAGKKLVQQQH-----------------CHARLSSRLETIRTPCK----W---------------------LPPLWHVRQLLQPAGISLDWRFERRAQNHEMDYPPHRVEVRVVLGTRDSWAQDEVLRRVGRIFTDGSKRDEGVGAAFVVMDGQGRVLATGL 369
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S4DBB4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBB4_HETAK) HSP 1 Score: 214 bits (545), Expect = 1.240e-60 Identity = 112/120 (93.33%), Postives = 114/120 (95.00%), Query Frame = 3
Query: 822 LAAAVAAGRLGIPLLDPTTVDTAVAALAEAQWGAFQAATPLKRRKSWKKAVPWWTPELSALKVRFRRARKKRRRSAQHEEEFQCERLALNQAMCTAKRPSWRKFCSEEKQPFGRVYNKVL 1181
+AAAVAAGRLGIPLLDPTTVDTAVAALAEAQWGAFQAATPLKRRKSWKKAVPWWTPELSALKVRFRRARKKRRRSAQHEEEFQ ERLA N+AM TAKR SWRKFCS EKQPFGRVY KVL
Sbjct: 1 MAAAVAAGRLGIPLLDPTTVDTAVAALAEAQWGAFQAATPLKRRKSWKKAVPWWTPELSALKVRFRRARKKRRRSAQHEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVY-KVL 119
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Match: A0A7S4DB43_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB43_HETAK) HSP 1 Score: 218 bits (556), Expect = 6.270e-59 Identity = 173/456 (37.94%), Postives = 180/456 (39.47%), Query Frame = 3
Query: 822 LAAAVAAGRLGIPLLDPTTVDTAVAALAEAQWGAFQAATPLKRRKSWKKAVPWWTPELSALKVRFRRARKKRRRSAQHEEEFQCERLALNQAMCTAKRPSWRKFCSEEKQPFGRVYNKVLPH*QLP-----------------------------------SGAAV---------------------------------QLERELVQL--LQAPSP-----------------------------GLSPRG----------------------------------------------------------------------------------------------------------------------------------------------------------VGPPIYWTTHNDRVAVYVEVGGEALFIGYADDNGFTVEGGPDELDALVELA 1430
+AAAVAAGRLGIPLLDPTTVDTAVAALAEAQWGAFQAATPLKRRKSWKKAVPWWTPELSALKVRFRRARKKRRRSAQHEEEFQ ERLA N+AM TAKR SWRKFCS EKQPFGRVY + P AAV +L RE+ Q +AP P G PRG VGPPIYWTTHN+RVAVYVEVGGEALFIGYADDNGFTVEGGPDEL ALVELA
Sbjct: 1 MAAAVAAGRLGIPLLDPTTVDTAVAALAEAQWGAFQAATPLKRRKSWKKAVPWWTPELSALKVRFRRARKKRRRSAQHEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSNPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEVSEDAAVAAAQECVERQASQFENWCRLSLPDDDDGPFTTFELRREIFQRGGYKAPGPDMIIGRVLKECIDEVEPHLASVTNACRDLGYFPRGWKVEDGVACAKPGKKDYTLMKAYRLLALLCAASKILEGMITSRVSWRAERGSWFHEHAYGFRPDRNKDGAVEELVTRAERAIHRGRVLVAVFFDVDGAFNQSWHPAVLTALQEKGCPPGLFCLISSFLRERQCNLNVNGFSASKLLRLGFPQGGVGPPIYWTTHNNRVAVYVEVGGEALFIGYADDNGFTVEGGPDELGALVELA 456 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.18.1 >prot_H-akashiwo_Contig11.18.1 ID=prot_H-akashiwo_Contig11.18.1|Name=mRNA_H-akashiwo_Contig11.18.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=275bp MWLIQVSFLSKITPGMSAPNGMECPCHSGISWQSSTVSGTAMSLPLWPSLback to top mRNA from alignment at H-akashiwo_Contig11:560112..562822+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig11.18.1 ID=mRNA_H-akashiwo_Contig11.18.1|Name=mRNA_H-akashiwo_Contig11.18.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2711bp|location=Sequence derived from alignment at H-akashiwo_Contig11:560112..562822+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig11:560112..562822+ >mRNA_H-akashiwo_Contig11.18.1 ID=mRNA_H-akashiwo_Contig11.18.1|Name=mRNA_H-akashiwo_Contig11.18.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=825bp|location=Sequence derived from alignment at H-akashiwo_Contig11:560112..562822+ (Heterosigma akashiwo CCMP452)back to top |