prot_H-akashiwo_Contig999.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig999.2.1
Unique Nameprot_H-akashiwo_Contig999.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length71
Homology
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: A0A6V1XFX6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XFX6_HETAK)

HSP 1 Score: 138 bits (348), Expect = 5.850e-40
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0
Query:    1 PPSQAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 71
            P  +AVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT
Sbjct:   39 PARKAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 109          
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: D8LNY9_ECTSI (DNA repair helicase rad5,16, putative (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY9_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 3.870e-25
Identity = 47/70 (67.14%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 PPSQAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNL 70
            P ++AVVFSQWT+MLDL E  + R GW   RLDG+MSQQQRE AL+ FAT+  + VML+SLKAGGVGLNL
Sbjct:    6 PGAKAVVFSQWTHMLDLAEASIARGGWTFRRLDGAMSQQQRESALKGFATDESVTVMLVSLKAGGVGLNL 75          
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: A0A6H5KHD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD4_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.130e-22
Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    1 PPSQAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 71
            P ++AVVFSQWT+MLDL E  + R GW   RLDG+MSQQQRE AL+ FAT+  + VML+SLKAGGVGLNLT
Sbjct: 1462 PGAKAVVFSQWTHMLDLAEASIARGGWTFRRLDGAMSQQQRESALKGFATDESVTVMLVSLKAGGVGLNLT 1532          
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: A0A0L0H763_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H763_SPIPD)

HSP 1 Score: 90.1 bits (222), Expect = 1.990e-19
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    2 PSQAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 71
            P +AVVFSQWT MLDL+E  LR  G+   RLDG MS+Q R DA+E F T+  + VML+SLKAGGVGLNLT
Sbjct: 1103 PIKAVVFSQWTNMLDLLEPSLRTYGFGFVRLDGKMSRQDRTDAMESFKTDPSVTVMLVSLKAGGVGLNLT 1172          
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: UPI00192EDC85 (DNA repair protein RAD5A-like n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192EDC85)

HSP 1 Score: 82.0 bits (201), Expect = 1.240e-18
Identity = 39/68 (57.35%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    3 SQAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNL 70
            S+++VFSQWT  LDL+++ L R      RLDGS+SQQQRE+ ++RF+ + DI V+L+SLKAGGVG+NL
Sbjct:    8 SKSIVFSQWTAFLDLLQIPLSRNKIPFVRLDGSLSQQQRENVIKRFSEDNDILVLLMSLKAGGVGVNL 75          
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: A0A7S3ZFV6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZFV6_9EUKA)

HSP 1 Score: 83.2 bits (204), Expect = 2.060e-18
Identity = 38/67 (56.72%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    4 QAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNL 70
            ++VVFSQWT+MLDL+E  L   G+++ RLDGSM+++QRE  L++F  + +  V+L+SLKAGGVGLNL
Sbjct:   32 KSVVFSQWTHMLDLIEPALTEKGFKYVRLDGSMNRKQREKVLDQFRGDAETEVILISLKAGGVGLNL 98          
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: A0A4D9CS79_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS79_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.420e-18
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    2 PSQAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 71
            P++AV+FSQWT MLDLVE  L   GW + RLDG  S  QR + L+ FA+   + VM+LSL+AGGVGLNLT
Sbjct: 1709 PAKAVIFSQWTGMLDLVETALEGRGWGYVRLDGGTSHAQRREVLQEFASNPRVRVMVLSLRAGGVGLNLT 1778          
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: D8RRU1_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RRU1_SELML)

HSP 1 Score: 85.9 bits (211), Expect = 2.620e-18
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    3 SQAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 71
            S++VVFSQWT  LDL+E+ L+R  +R  RLDG++SQ +RE  L+ F+   D+ VML+SLKAGGVGLNLT
Sbjct:  189 SKSVVFSQWTAFLDLLEIPLKRKNFRFVRLDGTLSQHKREQVLKDFSNIPDVAVMLISLKAGGVGLNLT 257          
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: A0A139AVK7_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AVK7_GONPJ)

HSP 1 Score: 86.7 bits (213), Expect = 3.280e-18
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    2 PSQAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 71
            P ++VVFSQWT  LD++ V LR  G++  RLDG MS+ +R  A+ERF T+ D+ VML+SLKAGGVGLNLT
Sbjct: 1034 PEKSVVFSQWTTFLDIIAVHLRTGGFQFVRLDGKMSRPERNLAMERFKTDPDVLVMLVSLKAGGVGLNLT 1103          
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Match: A0A425DCE9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DCE9_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 4.330e-18
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    4 QAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 71
            + VVFSQWT+MLDL++  L + G+ H R DGS+ Q  RE  L RF T+ D+ V+++SLKAGGVGLNLT
Sbjct:  400 KVVVFSQWTHMLDLIQSTLHQHGYTHCRFDGSLKQDDREKVLHRFNTQPDVQVLVISLKAGGVGLNLT 467          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig999.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1XFX6_HETAK5.850e-4095.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LNY9_ECTSI3.870e-2567.14DNA repair helicase rad5,16, putative (Partial) (F... [more]
A0A6H5KHD4_9PHAE1.130e-2267.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0L0H763_SPIPD1.990e-1964.29Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
UPI00192EDC851.240e-1857.35DNA repair protein RAD5A-like n=1 Tax=Eucalyptus g... [more]
A0A7S3ZFV6_9EUKA2.060e-1856.72Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A4D9CS79_9STRA2.420e-1858.57Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
D8RRU1_SELML2.620e-1859.42Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A0A139AVK7_GONPJ3.280e-1860.00Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
A0A425DCE9_9STRA4.330e-1857.35Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..71
e-value: 1.1E-24
score: 89.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..71
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 3..70
e-value: 1.6E-9
score: 38.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..71
score: 9.981113
NoneNo IPR availablePANTHERPTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDcoord: 4..71
NoneNo IPR availableCDDcd18793SF2_C_SNFcoord: 5..71
e-value: 1.57084E-32
score: 107.177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig999contigH-akashiwo_Contig999:29082..31385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig999.2.1mRNA_H-akashiwo_Contig999.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig999 29082..31385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig999.2.1 ID=prot_H-akashiwo_Contig999.2.1|Name=mRNA_H-akashiwo_Contig999.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=71bp
PPSQAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFAT
ETDIPVMLLSLKAGGVGLNLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001650Helicase_C