prot_H-akashiwo_Contig971.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig971.5.1
Unique Nameprot_H-akashiwo_Contig971.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length76
Homology
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BLAST of mRNA_H-akashiwo_Contig971.5.1 vs. uniprot
Match: A0A7S3XNC5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNC5_HETAK)

HSP 1 Score: 146 bits (368), Expect = 1.720e-42
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 RIRTPSGSLKRVEVFGTSTLKDLRSQLEAEGLVNSPKDKLLKGEHPIENETKTVDELGMKNGDILDLQSAEPRAP 75
            RIRTPSGSLKRVEVFGTSTLKDLRSQLEAEGLVNSPKDKLLKGEHPIENETKTVDELGMKNGDILDLQSAEPRAP
Sbjct:   33 RIRTPSGSLKRVEVFGTSTLKDLRSQLEAEGLVNSPKDKLLKGEHPIENETKTVDELGMKNGDILDLQSAEPRAP 107
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig971.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3XNC5_HETAK1.720e-42100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 3..73
e-value: 3.0E-6
score: 28.7
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 1..74
score: 8.981562
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 2..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig971contigH-akashiwo_Contig971:181272..181771 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig971.5.1mRNA_H-akashiwo_Contig971.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig971 181272..181771 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig971.5.1 ID=prot_H-akashiwo_Contig971.5.1|Name=mRNA_H-akashiwo_Contig971.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=76bp
RIRTPSGSLKRVEVFGTSTLKDLRSQLEAEGLVNSPKDKLLKGEHPIENE
TKTVDELGMKNGDILDLQSAEPRAPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf