prot_H-akashiwo_Contig962.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig962.4.1
Unique Nameprot_H-akashiwo_Contig962.4.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length255
Homology
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 381 bits (978), Expect = 3.580e-130
Identity = 187/276 (67.75%), Postives = 221/276 (80.07%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRTQ----------------------SEQPRLGGDLIFRAYTDADFCQDRIKGKSVTGYVIMLCDSLIVWASKLQTAVSTSTVEAEYLSLRSAVKNIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARDMVVSRKNRHFHVSYHLA 254
            MVAVYVDDLVIS S  +++++ K S AS++ +TD G L QILGIKV RD RNKCF LSQ SFIKDA++KFGLD+LPA +TP+DHT DL PTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQRTQ                      SE  RLGGDL+ RA++D+DFC DR+ GKSVTGY++ L D+ IVW+SKLQ AV+TSTVEAEYL+LRSAVK+IMWLR LL ++GCPQ EPTPVVEDNSAC+EWA DM+V+++NRHFHVSYHLA
Sbjct:   32 MVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLA 307          
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 204 bits (520), Expect = 5.540e-62
Identity = 101/148 (68.24%), Postives = 118/148 (79.73%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRTQSEQPRLGGDLIFRAY 148
            MVAVYVDDLVIS S  +I+++ K S AS++ +TD G L QILGIKV RD RNKCF LSQ SFIKDA++KFGLD+LPA +TP+DHT DL PTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQRTQ        + + RA+
Sbjct:  118 MVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAF 265          
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 198 bits (503), Expect = 2.190e-54
Identity = 109/276 (39.49%), Postives = 163/276 (59.06%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLP--DSNRYRSMVGTLAWVANWTRPELAFTVHKLQR----------------------TQSEQPRLGGDLIFRAYTDADFCQDRIKGKSVTGYVIMLCDSLIVWASKLQTAVSTSTVEAEYLSLRSAVKNIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARDMVVSRKNRHFHVSYH 252
            +++VYVDD+V++SS  S ++ +K + +  + ++D+G +  ILGIKV RD   +   LSQ SFI++A  KF +     V  P++   D+         L   ++ ++RS+VGT+ W+A WT PE+A+++H L +                      T+ +   LGG L   AY DADFC +R KG+S +G+ I L  S I+W+S++Q  V+ +T EAEY+SLR+AV ++MWL+ LL  LG  Q    P+ EDN ACI WA D  VS+  RH HVSYH
Sbjct:  677 LISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYH 951          
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A2N9GB12_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GB12_FAGSY)

HSP 1 Score: 157 bits (396), Expect = 6.480e-40
Identity = 93/253 (36.76%), Postives = 139/253 (54.94%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRTQSEQPRLGGDLIFRAYTDADFCQDRIKGKSVTGYVIMLCDSLIVWASKLQTAVSTSTVEAEYLSLRSAVKNIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARDMVVSRKNRHFHVSYHL 253
            ++ +YVDD++I+    + I DL+   + +F++ DLG L+  LG++VT    +  ++LSQA +  D +SK GL     V TP++    L  T G    L D+  YR +VG+L ++   TRP+LA+ VH  Q +          L  RAY DAD+  D    +S TGY  +L  SLI W SK Q+ V+ S+ EAEY +L  A   ++WLR LL D+G PQ   TP+  DN + I  A + V   + +H  +  H 
Sbjct: 1152 LILLYVDDMIITGDDTAGICDLQKFLSQQFEMKDLGTLSYFLGLEVTSS--SDGYYLSQAKYASDLLSKAGLTDSKTVSTPLELNVKLNTTDG--EPLSDATLYRQLVGSLIYLTV-TRPDLAYAVHLAQSS----------LELRAYADADWAGDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADATSELLWLRWLLADMGAPQTTSTPIHCDNRSAIHIAHNDVFHERTKHIEIDCHF 1389          
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK)

HSP 1 Score: 151 bits (382), Expect = 7.250e-40
Identity = 74/102 (72.55%), Postives = 88/102 (86.27%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPDSN 102
            MVAVYVDDLV+SS+  S+++ LK+SF SRF ITDLGPL  ILGIKV+RD  NKCF+LSQASF++DAISKFGLD+LPA RTPM +  DL PTPGFK+SLPD+N
Sbjct:  308 MVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409          
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A2N9EEN5_FAGSY (Integrase catalytic domain-containing protein n=7 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EEN5_FAGSY)

HSP 1 Score: 156 bits (394), Expect = 1.200e-39
Identity = 98/278 (35.25%), Postives = 150/278 (53.96%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRTQSEQPR-------------LGGDLI------------FRAYTDADFCQDRIKGKSVTGYVIMLCDSLIVWASKLQTAVSTSTVEAEYLSLRSAVKNIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARDMVVSRKNRHFHVSYHL 253
            ++ +YVDD++I+   LS I +LKA  +  F++ DLG LN  LG+++T    +  F+L+QA +  D +S+ GL     + TP++  A L P+ G    LPD   YR +VG+L ++   TRP++++ VH++ +  S  PR             L G L              RAY+DAD+  D    +S TGY  +L  SLI W SK Q+ V+ S+ EAEY +L      ++WLR LL DLG   +  TP+  DN + I+ AR+ V   + +H  +  HL
Sbjct: 1125 LLLLYVDDMIITGDDLSGIQELKAFLSQNFEMKDLGHLNYFLGLEITSS--DDGFYLTQAKYTSDLLSRAGLTDHKILDTPIEFNARLTPSSG--ELLPDPTLYRQLVGSLVYLTV-TRPDISYAVHQVSQFMSA-PRSTHYAAVLRILRYLKGTLFHGLHFSAQSPLTLRAYSDADWAGDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADTTSELLWLRWLLQDLGVSTSSATPIYCDNRSAIQIARNDVFHERTKHIEIDCHL 1396          
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A2N9J7J4_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J7J4_FAGSY)

HSP 1 Score: 155 bits (391), Expect = 3.040e-39
Identity = 97/278 (34.89%), Postives = 144/278 (51.80%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRTQSEQPR-------------LGGDLI------------FRAYTDADFCQDRIKGKSVTGYVIMLCDSLIVWASKLQTAVSTSTVEAEYLSLRSAVKNIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARDMVVSRKNRHFHVSYHL 253
            ++ +YVDD++I+    + I DL+   + +F++ DLG L+  LG++VT    + C++LSQA +  D +SK GL     V TP++    L  T G    L D+  YR +VG+L ++   TRP+LA+ VH + +  S  PR             + G L              RAY DAD+  D    +S TGY  +L  SLI W SK Q+ V+ S+ EAEY +L  A   ++WLR LL D+G PQ   TP+  DN + I  A + V     +H  +  H 
Sbjct:  913 LILLYVDDMIITGDDTADICDLQKFLSQQFEMKDLGTLSYFLGLEVTSS--SDCYYLSQAKYASDLLSKAGLTDSKTVSTPLELNVKLNTTDG--EPLSDATLYRQLVGSLIYLTV-TRPDLAYAVHLVSQFMSA-PRSTHYAAVLRILRYIKGTLFHGLHFSAQSSLELRAYADADWAGDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADATSELLWLRWLLADMGAPQTTSTPIHRDNRSAIHIAHNDVFHEHTKHIEIDCHF 1184          
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A2N9HNE2_FAGSY (Uncharacterized protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HNE2_FAGSY)

HSP 1 Score: 154 bits (389), Expect = 5.390e-39
Identity = 97/278 (34.89%), Postives = 150/278 (53.96%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRTQSEQPR-------------LGGDLI------------FRAYTDADFCQDRIKGKSVTGYVIMLCDSLIVWASKLQTAVSTSTVEAEYLSLRSAVKNIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARDMVVSRKNRHFHVSYHL 253
            ++ +YVDD++I+   LS I +LKA  +  F++ DLG L+  LG+++T    +  F+L+QA +  D +S+ GL     + TP++  A L P+ G    LPD   YR +VG+L ++   TRP++++ VH++ +  S  PR             L G L              RAY+DAD+  D    +S TGY  +L  SLI W SK Q+ V+ S+ EAEY +L      ++WLR LL DLG   +  TP+  DN + I+ AR+ V   + +H  +  HL
Sbjct:  821 LLLLYVDDMIITGDDLSGIQELKAFLSQNFEMKDLGHLSYFLGLEITSS--DDGFYLTQAKYTSDLLSRAGLTDHKILDTPIEFNARLTPSSG--ELLPDPTLYRQLVGSLVYLTV-TRPDISYAVHQVSQFMSA-PRSTHYAAVLRILRYLKGTLFHGLHFSAQSPLTLRAYSDADWAGDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADTTSELLWLRWLLQDLGVSTSSATPIYCDNRSAIQIARNDVFHERTKHIEIDCHL 1092          
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A2N9I7J4_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I7J4_FAGSY)

HSP 1 Score: 154 bits (389), Expect = 5.480e-39
Identity = 97/278 (34.89%), Postives = 150/278 (53.96%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRTQSEQPR-------------LGGDLI------------FRAYTDADFCQDRIKGKSVTGYVIMLCDSLIVWASKLQTAVSTSTVEAEYLSLRSAVKNIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARDMVVSRKNRHFHVSYHL 253
            ++ +YVDD++I+   LS I +LKA  +  F++ DLG L+  LG+++T    +  F+L+QA +  D +S+ GL     + TP++  A L P+ G    LPD   YR +VG+L ++   TRP++++ VH++ +  S  PR             L G L              RAY+DAD+  D    +S TGY  +L  SLI W SK Q+ V+ S+ EAEY +L      ++WLR LL DLG   +  TP+  DN + I+ AR+ V   + +H  +  HL
Sbjct:  935 LLLLYVDDMIITGDDLSGIQELKAFLSQNFEMKDLGHLSYFLGLEITSS--DDGFYLTQAKYTSDLLSRAGLTDHKILDTPIEFNARLTPSSG--ELLPDPTLYRQLVGSLVYLTV-TRPDISYAVHQVSQFMSA-PRSTHYAAVLRILRYLKGTLFHGLHFSAQSPLTLRAYSDADWAGDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADTTSELLWLRWLLQDLGVSTSSATPIYCDNRSAIQIARNDVFHERTKHIEIDCHL 1206          
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Match: A0A2N9E5K6_FAGSY (Uncharacterized protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9E5K6_FAGSY)

HSP 1 Score: 154 bits (389), Expect = 5.490e-39
Identity = 97/278 (34.89%), Postives = 150/278 (53.96%), Query Frame = 0
Query:    1 MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDLRNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRTQSEQPR-------------LGGDLI------------FRAYTDADFCQDRIKGKSVTGYVIMLCDSLIVWASKLQTAVSTSTVEAEYLSLRSAVKNIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARDMVVSRKNRHFHVSYHL 253
            ++ +YVDD++I+   LS I +LKA  +  F++ DLG L+  LG+++T    +  F+L+QA +  D +S+ GL     + TP++  A L P+ G    LPD   YR +VG+L ++   TRP++++ VH++ +  S  PR             L G L              RAY+DAD+  D    +S TGY  +L  SLI W SK Q+ V+ S+ EAEY +L      ++WLR LL DLG   +  TP+  DN + I+ AR+ V   + +H  +  HL
Sbjct:  946 LLLLYVDDMIITGDDLSGIQELKAFLSQNFEMKDLGHLSYFLGLEITSS--DDGFYLTQAKYTSDLLSRAGLTDHKILDTPIEFNARLTPSSG--ELLPDPTLYRQLVGSLVYLTV-TRPDISYAVHQVSQFMSA-PRSTHYAAVLRILRYLKGTLFHGLHFSAQSPLTLRAYSDADWAGDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADTTSELLWLRWLLQDLGVSTSSATPIYCDNRSAIQIARNDVFHERTKHIEIDCHL 1217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig962.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK3.580e-13067.75Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6S2_HETAK5.540e-6268.24Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y1P1_HETAK2.190e-5439.49Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A2N9GB12_FAGSY6.480e-4036.76Integrase catalytic domain-containing protein n=1 ... [more]
A0A7S3Y3B6_HETAK7.250e-4072.55Hypothetical protein (Fragment) n=6 Tax=Heterosigm... [more]
A0A2N9EEN5_FAGSY1.200e-3935.25Integrase catalytic domain-containing protein n=7 ... [more]
A0A2N9J7J4_FAGSY3.040e-3934.89Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9HNE2_FAGSY5.390e-3934.89Uncharacterized protein n=2 Tax=Fagus sylvatica Ta... [more]
A0A2N9I7J4_FAGSY5.480e-3934.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9E5K6_FAGSY5.490e-3934.89Uncharacterized protein n=2 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..82
e-value: 2.4E-14
score: 53.5
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 146..252
e-value: 2.09569E-41
score: 136.829
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig962contigH-akashiwo_Contig962:166483..167313 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig962.4.1mRNA_H-akashiwo_Contig962.4.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig962 166402..167325 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig962.4.1 ID=prot_H-akashiwo_Contig962.4.1|Name=mRNA_H-akashiwo_Contig962.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=255bp
MVAVYVDDLVISSSHLSIITDLKASFASRFKITDLGPLNQILGIKVTRDL
RNKCFFLSQASFIKDAISKFGLDFLPAVRTPMDHTADLAPTPGFKSSLPD
SNRYRSMVGTLAWVANWTRPELAFTVHKLQRTQSEQPRLGGDLIFRAYTD
ADFCQDRIKGKSVTGYVIMLCDSLIVWASKLQTAVSTSTVEAEYLSLRSA
VKNIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARDMVVSRKNRHFHVS
YHLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf