prot_H-akashiwo_Contig93.30.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig93.30.1
Unique Nameprot_H-akashiwo_Contig93.30.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length149
Homology
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: A0A7S2XUT6_9STRA (AP complex subunit sigma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUT6_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.980e-86
Identity = 124/147 (84.35%), Postives = 134/147 (91.16%), Query Frame = 0
Query:    1 MINFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEEESE 147
            MINFMLLISRQGK RLTKWY +YG KEK+RI RE+T+MVLNRPPKMCNFIEWKD+KIVYKRYASL+FV CI K DNELITLEMIHL+VEVLDRYFGNVCELDIIFNFHKAYYILDE+FI GELQES K+EVLR+C  MDDMMEE  E
Sbjct:    1 MINFMLLISRQGKTRLTKWYDSYGTKEKARIMREITSMVLNRPPKMCNFIEWKDKKIVYKRYASLFFVVCIDKGDNELITLEMIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFIAGELQESGKREVLRICGQMDDMMEEGKE 147          
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: A0A7S2SD76_9STRA (AP complex subunit sigma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD76_9STRA)

HSP 1 Score: 250 bits (638), Expect = 6.110e-83
Identity = 118/145 (81.38%), Postives = 136/145 (93.79%), Query Frame = 0
Query:    1 MINFMLLISRQGKIRLTKWYQTYGA-KEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEE 144
            MINFMLLISRQGK RLTKWY++YG+ KEK+RI RE+T MVL+RPPK+CNFIEW+D+K++YKRYASL+FVAC+ K DNEL+TLEMIHLFVE+LDRYFGNVCELDIIFNFHKAYYILDE+FI GELQESSKKEVL VCA MD+MM+E
Sbjct:   14 MINFMLLISRQGKTRLTKWYESYGSTKEKARIVREITAMVLSRPPKLCNFIEWRDKKVIYKRYASLFFVACVDKEDNELVTLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFINGELQESSKKEVLSVCAQMDEMMDE 158          
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: A0A835Z7C9_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7C9_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.220e-82
Identity = 115/144 (79.86%), Postives = 135/144 (93.75%), Query Frame = 0
Query:    1 MINFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEE 144
            M+NF+LL+SRQGK RLTKWY+ Y +KEK+RI RE+TT+VL RPPKMCNF+EW+D+KIVYKRYASL+FVAC+ ++DNELITLE IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDE+FIGGELQESSKKEVLRVC  +DD+ME+
Sbjct:    1 MLNFLLLVSRQGKTRLTKWYEAYTSKEKARIVREITTLVLARPPKMCNFLEWRDKKIVYKRYASLFFVACVDRDDNELITLEQIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCGQIDDLMED 144          
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: D8LBL7_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBL7_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 2.200e-82
Identity = 121/147 (82.31%), Postives = 134/147 (91.16%), Query Frame = 0
Query:    1 MINFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEEESE 147
            MINF+LLISRQGK RLTKWYQTY AKEK+R  RE+T+ VL R  KMCNF+EW+D+KIVYKRYASL+FVACI ++DNELITLE IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDE+FIGGELQESSKKEVLRVC+ MDD+MEE  E
Sbjct:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKE 147          
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: A0A7S4A8C4_9STRA (AP complex subunit sigma n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8C4_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.220e-79
Identity = 113/147 (76.87%), Postives = 132/147 (89.80%), Query Frame = 0
Query:    1 MINFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEEESE 147
            MINF+LL+SRQGK RLTKWY++Y AKEK+RI RE+T+ VL R PKMCNF+EW+++KI+YKRYASL+F+ C+   DNELITLEMIHL+VEVLDRYFGNVCELDIIFNFHKAYYILDEIF+GGEL ESSKKEVL VCA MD++MEE  E
Sbjct:    1 MINFLLLVSRQGKTRLTKWYESYAAKEKARIVREITSTVLARAPKMCNFVEWRNKKIIYKRYASLFFIVCVDAEDNELITLEMIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDEIFVGGELCESSKKEVLSVCAQMDELMEEREE 147          
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: A0A024THD2_9STRA (AP complex subunit sigma n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024THD2_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.880e-78
Identity = 116/147 (78.91%), Postives = 127/147 (86.39%), Query Frame = 0
Query:    1 MINFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEEESE 147
            MI+FMLL+SRQGK RL+KWY T   K+K+RI REVTT+VL RP K CNFIEWKDQKIVYKRYASLYFVACI K +NELITLE+IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDE+ IGG LQE SKKE+LRVC   +D MEE  E
Sbjct:    1 MIDFMLLVSRQGKTRLSKWYSTVPLKDKARIIREVTTLVLGRPQKQCNFIEWKDQKIVYKRYASLYFVACISKEENELITLEVIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELLIGGNLQEPSKKEILRVCQQQEDFMEESKE 147          
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: A0A7S3LZF2_9STRA (AP complex subunit sigma n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZF2_9STRA)

HSP 1 Score: 237 bits (605), Expect = 7.680e-78
Identity = 112/147 (76.19%), Postives = 130/147 (88.44%), Query Frame = 0
Query:    1 MINFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEEESE 147
            MINF+LL+SRQGK RL+KW+    AKEK+R  RE+T  VL+RPPKMCNFIEW+D+K++YKRYASL+FVAC+ KNDNELI LE IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDE+FIGG LQE+SK EVLR+CA MD+MM+E  E
Sbjct:   18 MINFILLVSRQGKTRLSKWFVQMTAKEKTRAVRELTATVLSRPPKMCNFIEWQDKKVIYKRYASLFFVACVDKNDNELIVLEQIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQETSKVEVLRICAAMDEMMDESKE 164          
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: W7T3W8_9STRA (AP complex subunit sigma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3W8_9STRA)

HSP 1 Score: 236 bits (603), Expect = 8.480e-78
Identity = 110/149 (73.83%), Postives = 132/149 (88.59%), Query Frame = 0
Query:    1 MINFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEEESEGN 149
            MINF+LL+SRQGK RL+KWY+ Y  KEK+R  RE+T +VL R PKMCNFIEW+D+K++YKRYASL+F+A +  +DNELITLEMIHLFVE+LDRYFGNVCELDIIFNFHKAYYILDE+FIGG LQESSK EVLRVC+ MD++MEE+ + N
Sbjct:    1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDDN 149          
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: A0A812YG65_SYMMI (AP complex subunit sigma (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YG65_SYMMI)

HSP 1 Score: 232 bits (591), Expect = 6.520e-76
Identity = 108/143 (75.52%), Postives = 128/143 (89.51%), Query Frame = 0
Query:    2 INFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEE 144
            INF+LL+SRQGK RLTKW+     K+K+R  RE+T MVL+RPPK+CNF+EW+D+K+VYKRYASLYF+AC+ K DNELITLE IHLFVEVLDRYFGNVCELDIIFNFHKAYYI+DE+FIGG LQE+SK EVLR+CA MD+MM+E
Sbjct:    1 INFILLVSRQGKTRLTKWFVQKEPKDKTRSVRELTGMVLSRPPKLCNFLEWRDKKVVYKRYASLYFIACVDKEDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYIMDELFIGGYLQETSKAEVLRICAAMDEMMDE 143          
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Match: A0A2D4BWM8_PYTIN (AP complex subunit sigma n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BWM8_PYTIN)

HSP 1 Score: 226 bits (577), Expect = 7.250e-74
Identity = 109/147 (74.15%), Postives = 127/147 (86.39%), Query Frame = 0
Query:    1 MINFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFIEWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEEESE 147
            MI  MLL+SRQGK RL+KWY     KEK R+ RE+T +VL+RPPK CNFIE+KD+KIVYKRYASLYF+ACI K++NELITLEMIHL+VEVLDRYFGNVCELDIIFNFHKAYYILDE+FIGG LQESSKKE+LR+  + +D M+E  E
Sbjct:    1 MIEAMLLVSRQGKTRLSKWYTAASIKEKGRMIREITALVLSRPPKQCNFIEFKDKKIVYKRYASLYFIACISKDENELITLEMIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKKEMLRIINSQEDYMDESKE 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig93.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XUT6_9STRA2.980e-8684.35AP complex subunit sigma n=1 Tax=Fibrocapsa japoni... [more]
A0A7S2SD76_9STRA6.110e-8381.38AP complex subunit sigma n=1 Tax=Rhizochromulina m... [more]
A0A835Z7C9_9STRA1.220e-8279.86AP complex subunit sigma n=1 Tax=Tribonema minus T... [more]
D8LBL7_ECTSI2.200e-8282.31AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S4A8C4_9STRA1.220e-7976.87AP complex subunit sigma n=1 Tax=Pelagomonas calce... [more]
A0A024THD2_9STRA1.880e-7878.91AP complex subunit sigma n=12 Tax=Saprolegniaceae ... [more]
A0A7S3LZF2_9STRA7.680e-7876.19AP complex subunit sigma n=1 Tax=Spumella elongata... [more]
W7T3W8_9STRA8.480e-7873.83AP complex subunit sigma n=2 Tax=Monodopsidaceae T... [more]
A0A812YG65_SYMMI6.520e-7675.52AP complex subunit sigma (Fragment) n=1 Tax=Symbio... [more]
A0A2D4BWM8_PYTIN7.250e-7474.15AP complex subunit sigma n=2 Tax=Pythium TaxID=479... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016635Adaptor protein complex, sigma subunitPIRSFPIRSF015588AP_complex_sigmacoord: 1..149
e-value: 6.2E-68
score: 225.4
IPR016635Adaptor protein complex, sigma subunitPANTHERPTHR11753ADAPTOR COMPLEXES SMALL SUBUNIT FAMILYcoord: 2..144
NoneNo IPR availableGENE3D3.30.450.60coord: 1..149
e-value: 8.5E-67
score: 225.8
NoneNo IPR availablePANTHERPTHR11753:SF20AP-1 COMPLEX SUBUNIT SIGMA-2coord: 2..144
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..140
e-value: 2.3E-56
score: 189.7
IPR000804Clathrin adaptor complex, small chainPROSITEPS00989CLAT_ADAPTOR_Scoord: 57..67
IPR044733AP-1 complex subunit sigmaCDDcd14831AP1_sigmacoord: 3..145
e-value: 1.60212E-99
score: 280.213
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig93contigH-akashiwo_Contig93:1001984..1027363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig93.30.1mRNA_H-akashiwo_Contig93.30.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig93 1001889..1027363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig93.30.1 ID=prot_H-akashiwo_Contig93.30.1|Name=mRNA_H-akashiwo_Contig93.30.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=149bp
MINFMLLISRQGKIRLTKWYQTYGAKEKSRIAREVTTMVLNRPPKMCNFI
EWKDQKIVYKRYASLYFVACIGKNDNELITLEMIHLFVEVLDRYFGNVCE
LDIIFNFHKAYYILDEIFIGGELQESSKKEVLRVCATMDDMMEEESEGN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016635AP_complex_ssu
IPR022775AP_mu_sigma_su
IPR000804Clathrin_sm-chain_CS
IPR044733AP1_sigma
IPR011012Longin-like_dom_sf