prot_H-akashiwo_Contig925.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig925.2.1
Unique Nameprot_H-akashiwo_Contig925.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length170
Homology
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: U2EKU1_9GAMM (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=6 Tax=Salinisphaera TaxID=180541 RepID=U2EKU1_9GAMM)

HSP 1 Score: 187 bits (476), Expect = 4.810e-58
Identity = 92/161 (57.14%), Postives = 115/161 (71.43%), Query Frame = 0
Query:    2 EPLLCPKTADLMDLEADGTQIAEDIFTDFGGSIRFFGRIATVRCFENNALVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVISQTEI 162
            E L      DL D  +D  QIAE IFTDFGG++ F G I+TV+CFE+N+LVR  L  PGEGRVLVVDG  S RCALLGD L  LAI NEW G++++GC+RD+ ++  M V VKA+  +P+KS K   GE+ V V FAGVSF PG W+YAD DGVV+S +E+
Sbjct:    3 EELRMTPVTDLCDEFSDKLQIAEPIFTDFGGTLDFAGPISTVKCFEDNSLVRAALEEPGEGRVLVVDGGASDRCALLGDNLAQLAIDNEWAGILVYGCIRDSAEISQMGVTVKALNAHPKKSNKKNQGERDVPVRFAGVSFMPGDWVYADLDGVVVSASEL 163          
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: UPI0018ECDC36 (ribonuclease E activity regulator RraA n=1 Tax=Chromobacterium sp. ASV5 TaxID=2795109 RepID=UPI0018ECDC36)

HSP 1 Score: 186 bits (472), Expect = 1.560e-57
Identity = 89/150 (59.33%), Postives = 114/150 (76.00%), Query Frame = 0
Query:    9 TADLMDLEADGTQIAEDIFTDFGGSIRFFGRIATVRCFENNALVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVIS 158
            T DL D   D  Q  E IF  +GG  RF GRIAT++ FE+N+LVR  L   G+G+VLVVDG GS RCALLGDQLG LA+KN W GV+I+GCVRD+  L  +P+GV+A+ T+PRKS K   G++GV+V+FAGV+ +PGHWLYAD+DGV++S
Sbjct:    5 TTDLCDRFDDKIQALEPIFRSYGGKTRFSGRIATLKLFEDNSLVREALGESGQGKVLVVDGGGSLRCALLGDQLGELAVKNGWEGVLIYGCVRDSVALAALPLGVRALNTHPRKSVKLGAGQRGVRVNFAGVALSPGHWLYADEDGVIVS 154          
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: A0A423PM18_9GAMM (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A423PM18_9GAMM)

HSP 1 Score: 185 bits (469), Expect = 4.750e-57
Identity = 85/152 (55.92%), Postives = 111/152 (73.03%), Query Frame = 0
Query:   11 DLMDLEADGTQIAEDIFTDFGGSIRFFGRIATVRCFENNALVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVISQTEI 162
            DL D  +D  QI + +FTDFGG + F G ++TV+CFE+N+LVR  L  PGE RVLV+DG GS+RCALLGD L  LAI NEW G+++ GC+RD+ D+  M V VKA+ T+P+KS+K   GE+ V V F GV+F PG WLYAD DGVV++  E+
Sbjct:    8 DLCDKYSDDLQILDPVFTDFGGRLDFAGPVSTVKCFEDNSLVRLALEEPGESRVLVIDGGGSERCALLGDNLAQLAIDNEWAGILVFGCIRDSADISQMDVAVKAVNTHPKKSFKKNQGERDVPVRFGGVNFMPGDWLYADLDGVVLADGEL 159          
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: A0A6N7R1G5_9GAMM (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Spiribacter sp. C176 TaxID=2664894 RepID=A0A6N7R1G5_9GAMM)

HSP 1 Score: 184 bits (467), Expect = 8.970e-57
Identity = 89/155 (57.42%), Postives = 113/155 (72.90%), Query Frame = 0
Query:    8 KTADLMDLEADGTQIAEDIFTDFGGSIRFFGRIATVRCFENNALVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVISQTEI 162
            KT+DL D   D  QI   +F+++GG   F G I TV+ FE+N  VR +L  PG+GRVLVVDGA S RCALLGDQLGALA  N W GV+++GCVRDA DL  + +GVKA+ T+PR+S KG GGE GV V  AGV+ TPG WL AD+DG+V+++T +
Sbjct:    4 KTSDLCDEHEDELQILAPLFSNYGGRHNFSGIIETVKTFEDNTQVRALLEQPGDGRVLVVDGAASLRCALLGDQLGALARDNGWSGVVVYGCVRDAADLAEIDIGVKALNTHPRRSMKGDGGEIGVPVTLAGVTLTPGQWLCADRDGIVVAETPL 158          
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: B5YNP4_THAPS (4-hydroxy-4-methyl-2-oxoglutarate aldolase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNP4_THAPS)

HSP 1 Score: 184 bits (467), Expect = 1.640e-56
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 0
Query:    1 MEPLLCPKTADLMDLEADGTQ----IAEDIFTDFGGSIRFFGRIATVRCFENNALVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVISQTEIHKN 165
            M P  CP  ADL D      Q    +   IF DFG    F GRI TVRCFE+N +VRTVL++PGE RVL++DG  SKR A+LGDQ+  LAI N W G+I++GCVRD+  +  M +GVKA+GT+P KS K   GE+GV V+F GV F PG W+YAD+DG+++S+ ++HK+
Sbjct:    1 MPPAPCPSLADLCDEHISSPQRLSVVEPGIFFDFGKVKSFHGRIETVRCFESNPIVRTVLSSPGENRVLIIDGGASKRVAILGDQITQLAINNNWSGIIVNGCVRDSALIGGMEIGVKALGTHPVKSVKTYQGERGVIVNFGGVEFVPGWWVYADEDGIIVSEKQLHKD 169          
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: A0A084IKL7_SALHC (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Salinisphaera TaxID=180541 RepID=A0A084IKL7_SALHC)

HSP 1 Score: 183 bits (465), Expect = 1.810e-56
Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 0
Query:   11 DLMDLEADGTQIAEDIFTDFGGSIRFFGRIATVRCFENNALVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVISQTEI 162
            DL D  +D  QI E +FTDFGG + F G I+TV+CFE+N+LVR  L  PG GRVLVVDG GS RCALLGD L  LAI N+W GVI++GC+RDAE +  M V VKA+ T+P KS K   GE+ V V FAGVSF P  WLYAD DG+V+S +E+
Sbjct:    6 DLCDEFSDKLQILEPMFTDFGGRLAFGGPISTVKCFEDNSLVRLALEEPGAGRVLVVDGGGSDRCALLGDNLAQLAIDNDWAGVIVYGCIRDAEAISQMDVAVKALNTHPLKSNKKNVGERDVPVRFAGVSFMPDDWLYADLDGIVVSASEL 157          
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: A0A846T6R0_9CYAN (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Synechococcaceae cyanobacterium SM1_2_3 TaxID=2720456 RepID=A0A846T6R0_9CYAN)

HSP 1 Score: 183 bits (465), Expect = 1.810e-56
Identity = 87/155 (56.13%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    8 KTADLMDLEADGTQIAEDIFTDFGGSIRFFGRIATVRCFENNALVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVISQTEI 162
            KT DL D  +D  QIAE IF D+GG + F G I T++ FE+N+LVRT+L  PGEGRVLVVDG GS RCALLGDQL  +A +N+W G++++GCVRD+  L  + VGVKA+G +P KS K   GE+ + V FAGV+F PGH+LYAD+DG+++S+  +
Sbjct:    4 KTTDLCDDFSDRLQIAEPIFNDYGGEVMFCGPIVTLKVFEDNSLVRTLLEEPGEGRVLVVDGGGSIRCALLGDQLAEMAEENDWAGIVVNGCVRDSTALSELGVGVKALGVHPLKSVKRGVGERDIPVRFAGVTFIPGHYLYADEDGLIVSEQPL 158          
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: A0A1K2HG49_9BURK (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Chitinimonas taiwanensis DSM 18899 TaxID=1121279 RepID=A0A1K2HG49_9BURK)

HSP 1 Score: 182 bits (462), Expect = 5.160e-56
Identity = 84/150 (56.00%), Postives = 108/150 (72.00%), Query Frame = 0
Query:    9 TADLMDLEADGTQIAEDIFTDFGGSIRFFGRIATVRCFENNALVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVIS 158
            T DL D   D  Q+AE +F  FG   RF G IAT++ FE+N+LVR+ L  PGEGRVLVVDG GS RCAL+G QLG LA+ N W G++++GCVRDA +L    VG++A+ T+P+KS K   G  G+ V FAGV F PGHWLYAD+DG+V++
Sbjct:    5 TTDLSDAHGDAVQVAEPLFRHFGQHARFAGPIATLKVFEDNSLVRSTLETPGEGRVLVVDGGGSLRCALVGGQLGELAVNNHWAGIVVYGCVRDALELNAQAVGIRALNTHPKKSVKKGEGSSGLAVQFAGVRFEPGHWLYADEDGIVVA 154          
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: A0A836C6L7_9STRA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6L7_9STRA)

HSP 1 Score: 182 bits (463), Expect = 7.550e-56
Identity = 95/158 (60.13%), Postives = 111/158 (70.25%), Query Frame = 0
Query:    7 PKTADLMDLEADGTQIAEDI-FTDFGGSIRFFGRIATVRCFENNALVRTVLNAP-GEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVISQTEI 162
            P TAD+MD      Q+A  I F D+GG  RF G IATVRC ENN LVR  L    G GRVLVVDG GS RCALLGD L A A++N W GVI+HGC+RD+  +  +P+GVKAIGTNP KS K   GE  V V FAGV FTPGHW+YAD+DG+V+S  E+
Sbjct:   10 PATADIMDHFQGQVQVAPSIGFRDYGGVRRFSGGIATVRCRENNPLVRQRLTKEAGGGRVLVVDGGGSTRCALLGDMLAAGAVQNGWAGVIVHGCIRDSAAIAQLPLGVKAIGTNPTKSGKADPGEADVPVTFAGVVFTPGHWVYADEDGIVVSAIEL 167          
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Match: A0A3A5J8R7_9GAMM (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Salinisphaera sp. Q1T1-3 TaxID=2321229 RepID=A0A3A5J8R7_9GAMM)

HSP 1 Score: 181 bits (460), Expect = 1.040e-55
Identity = 86/152 (56.58%), Postives = 110/152 (72.37%), Query Frame = 0
Query:   11 DLMDLEADGTQIAEDIFTDFGGSIRFFGRIATVRCFENNALVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCVRDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYADKDGVVISQTEI 162
            DL D  +D  QI E +FTDFGG + F G I+TV+CFE+N++VR  L  PGEGRVLVVDG GS RCALLGD L  LAI N W G++++GC+RDA D+  M + VKA+ T+P+KS K   GE+ V V F GV+F P  WLYAD DG+V+S+ E+
Sbjct:    6 DLCDAFSDKLQIVEPLFTDFGGRLDFGGPISTVKCFEDNSVVRLALEEPGEGRVLVVDGGGSDRCALLGDNLVQLAIDNGWAGIVVYGCIRDAADISQMDMAVKALNTHPKKSDKKNQGERDVLVRFGGVNFMPDDWLYADLDGIVVSEAEL 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig925.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
U2EKU1_9GAMM4.810e-5857.144-hydroxy-4-methyl-2-oxoglutarate aldolase n=6 Tax... [more]
UPI0018ECDC361.560e-5759.33ribonuclease E activity regulator RraA n=1 Tax=Chr... [more]
A0A423PM18_9GAMM4.750e-5755.924-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax... [more]
A0A6N7R1G5_9GAMM8.970e-5757.424-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
B5YNP4_THAPS1.640e-5652.664-hydroxy-4-methyl-2-oxoglutarate aldolase (Fragme... [more]
A0A084IKL7_SALHC1.810e-5659.874-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax... [more]
A0A846T6R0_9CYAN1.810e-5656.134-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A1K2HG49_9BURK5.160e-5656.004-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A836C6L7_9STRA7.550e-5660.134-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A3A5J8R7_9GAMM1.040e-5556.584-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010203Regulator of ribonuclease activity ATIGRFAMTIGR01935TIGR01935coord: 9..158
e-value: 6.6E-60
score: 199.3
NoneNo IPR availableGENE3D3.50.30.40coord: 5..168
e-value: 1.4E-42
score: 147.1
NoneNo IPR availablePANTHERPTHR332544-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATEDcoord: 17..161
NoneNo IPR availablePANTHERPTHR33254:SF44-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATEDcoord: 17..161
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinPFAMPF03737RraA-likecoord: 10..157
e-value: 1.3E-40
score: 139.0
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinCDDcd16841RraA_familycoord: 10..158
e-value: 1.21051E-55
score: 170.333
IPR036704Ribonuclease E inhibitor RraA/RraA-like superfamilySUPERFAMILY89562RraA-likecoord: 8..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig925contigH-akashiwo_Contig925:209267..209776 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig925.2.1mRNA_H-akashiwo_Contig925.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig925 209267..209776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig925.2.1 ID=prot_H-akashiwo_Contig925.2.1|Name=mRNA_H-akashiwo_Contig925.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=170bp
MEPLLCPKTADLMDLEADGTQIAEDIFTDFGGSIRFFGRIATVRCFENNA
LVRTVLNAPGEGRVLVVDGAGSKRCALLGDQLGALAIKNEWRGVIIHGCV
RDAEDLRNMPVGVKAIGTNPRKSWKGPGGEQGVQVHFAGVSFTPGHWLYA
DKDGVVISQTEIHKNLNKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010203RraA
IPR005493RraA/RraA-like
IPR036704RraA/RraA-like_sf