prot_H-akashiwo_Contig920.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig920.4.1
Unique Nameprot_H-akashiwo_Contig920.4.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length148
Homology
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BLAST of mRNA_H-akashiwo_Contig920.4.1 vs. uniprot
Match: A0A7S3YJJ0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJJ0_HETAK)

HSP 1 Score: 295 bits (755), Expect = 8.050e-100
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 
Query:    1 MACRSLSHPFSRVAYRHSRISLKNVPMQSSARHFSFKGAGGTVEKLTRDPKAIAVSLVGVNLGIFFHWNTNFSESERQFMEKHFAFSPEEPFLRIHTAFTSIFSHADAKPLLINSGMLVLFGPQAIASLGLARFFQLYIGGGICSRI 147
            MACRSLSHPFSRVAYRHSRISLKNVPMQSSARHFSFKGAGGTVEKLTRDPKAIAVSLVGVNLGIFFHWNTNFSESERQFMEKHFAFSPEEPFLRIHTAFTSIFSHADAKPLLINSGMLVLFGPQAIASLGLARFFQLYIGGGICSRI
Sbjct:    1 MACRSLSHPFSRVAYRHSRISLKNVPMQSSARHFSFKGAGGTVEKLTRDPKAIAVSLVGVNLGIFFHWNTNFSESERQFMEKHFAFSPEEPFLRIHTAFTSIFSHADAKPLLINSGMLVLFGPQAIASLGLARFFQLYIGGGICSRI 147
[Close]
BLAST of mRNA_H-akashiwo_Contig920.4.1 vs. uniprot
Match: A0A7S3YJK5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJK5_HETAK)

HSP 1 Score: 73.6 bits (179), Expect = 6.810e-14
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:  113 INSGMLVLFGPQAIASLGLARFFQLYIGGGICSRI 147
            INSGMLVLFGPQAIASLGLARFFQLYIGGGICSRI
Sbjct:    9 INSGMLVLFGPQAIASLGLARFFQLYIGGGICSRI 43
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig920.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3YJJ0_HETAK8.050e-100100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3YJK5_HETAK6.810e-14100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 44..147
e-value: 1.4E-12
score: 49.6
IPR035952Rhomboid-like superfamilySUPERFAMILY144091Rhomboid-likecoord: 52..145
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 95..145
e-value: 3.7E-7
score: 30.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig920contigH-akashiwo_Contig920:295213..296725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig920.4.1mRNA_H-akashiwo_Contig920.4.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig920 295175..297563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig920.4.1 ID=prot_H-akashiwo_Contig920.4.1|Name=mRNA_H-akashiwo_Contig920.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=148bp
MACRSLSHPFSRVAYRHSRISLKNVPMQSSARHFSFKGAGGTVEKLTRDP
KAIAVSLVGVNLGIFFHWNTNFSESERQFMEKHFAFSPEEPFLRIHTAFT
SIFSHADAKPLLINSGMLVLFGPQAIASLGLARFFQLYIGGGICSRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom