prot_H-akashiwo_Contig906.10.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig906.10.1
Unique Nameprot_H-akashiwo_Contig906.10.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length140
Homology
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BLAST of mRNA_H-akashiwo_Contig906.10.1 vs. uniprot
Match: A0A7S3Y4H8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4H8_HETAK)

HSP 1 Score: 134 bits (338), Expect = 4.240e-38
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 0 
Query:    1 MGATYHCVPLDREHELVEKVMFDTPVEIMWANRKEDDPDSVPVKVRAVGKGSWKIMSPDGNRICLSETMLVPEIDMAIVSWWKMR 85
            MGAT HCVPLDREHELV+KVMFDTPVEI+WA++ E DPDS+P+ VRAVGKG W I SPDG  I L ET+LVPE+D+AI+SW ++R
Sbjct:   33 MGATCHCVPLDREHELVDKVMFDTPVEIIWADKAEGDPDSMPISVRAVGKGLWNITSPDGKLIFLLETVLVPELDVAILSWRRLR 117
[Close]
BLAST of mRNA_H-akashiwo_Contig906.10.1 vs. uniprot
Match: A0A7S3Y4K7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4K7_HETAK)

HSP 1 Score: 127 bits (318), Expect = 2.850e-35
Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 0 
Query:    1 MGATYHCVPLDREHELVEKVMFDTPVEIMWANRKEDDPDSVPVKVRAVGKGSWKIMSPDGNRICLSETMLVPEIDMAIV 79
            MGAT HCVPLDREHELV KVMF+ PVEI+ A+R E DP+S+PV VRAVGKGSW I SPDG RICL ETMLVPE+D+A+V
Sbjct:   33 MGATCHCVPLDREHELVGKVMFNPPVEIILADRAEGDPESMPVTVRAVGKGSWNITSPDGERICLLETMLVPELDVAVV 111
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig906.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3Y4H8_HETAK4.240e-3871.76Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y4K7_HETAK2.850e-3575.95Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig906contigH-akashiwo_Contig906:435866..436285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig906.10.1mRNA_H-akashiwo_Contig906.10.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig906 435809..436357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig906.10.1 ID=prot_H-akashiwo_Contig906.10.1|Name=mRNA_H-akashiwo_Contig906.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=140bp
MGATYHCVPLDREHELVEKVMFDTPVEIMWANRKEDDPDSVPVKVRAVGK
GSWKIMSPDGNRICLSETMLVPEIDMAIVSWWKMRSKTVMVAHGNSIGVW
DPNQMVVEEEPAMCFNLDADLKYTLGPSPGRKFLLCMDT*
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