prot_H-akashiwo_Contig9.6.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig9.6.1
Unique Nameprot_H-akashiwo_Contig9.6.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length333
Homology
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BLAST of mRNA_H-akashiwo_Contig9.6.1 vs. uniprot
Match: A0A7S4DJE8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJE8_HETAK)

HSP 1 Score: 427 bits (1097), Expect = 3.200e-143
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0 
Query:   91 MSYRPVPDDQVEPNSFGTDFLDMTGDDLDLGILQEIGGLPMSGQSSTMGMPQHPTTVPPTKVQNTPAINSQQNPSSQGHLTLGTFQNGRVEAVALQSLSIPAGNGPLNTLQAVHRGGHQIVALNGQQGLLQIVKPEYLQQQQQXXXXXXXXXXXXPAPSSQNQATFIDASDGQYQLNADQVAKRQRIEDELTLEQKVLASKERNRENARNTRLRKKLYIEKLKAQVDELQAAQERREREERVR 333
            MSYRPVPDDQVEPNSFGTDFLDMTGDDLDLGILQEIGGLPMSGQSSTMGMPQHPTTVPPTKVQNTPAINSQQNPSSQGHLTLGTFQNGRVEAVALQSLSIPAGNGPLNTLQAVHRGGHQIVALNGQQGLLQIVKPEYLQQQQQXXXXXXXXXXXXPAPSSQNQATFIDASDGQYQLNADQVAKRQRIEDELTLEQKVLASKERNRENARNTRLRKKLYIEKLKAQVDELQAAQERREREERVR
Sbjct:    1 MSYRPVPDDQVEPNSFGTDFLDMTGDDLDLGILQEIGGLPMSGQSSTMGMPQHPTTVPPTKVQNTPAINSQQNPSSQGHLTLGTFQNGRVEAVALQSLSIPAGNGPLNTLQAVHRGGHQIVALNGQQGLLQIVKPEYLQQQQQXXXXXXXXXXXXPAPSSQNQATFIDASDGQYQLNADQVAKRQRIEDELTLEQKVLASKERNRENARNTRLRKKLYIEKLKAQVDELQAAQERREREERVR 243
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig9.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4DJE8_HETAK3.200e-143100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 274..294
NoneNo IPR availableCOILSCoilCoilcoord: 305..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..261
NoneNo IPR availableCDDcd14809bZIP_AUREO-likecoord: 290..323
e-value: 1.47913E-15
score: 68.0409

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig9contigH-akashiwo_Contig9:297801..299112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig9.6.1mRNA_H-akashiwo_Contig9.6.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig9 297801..299112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig9.6.1 ID=prot_H-akashiwo_Contig9.6.1|Name=mRNA_H-akashiwo_Contig9.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=333bp
SVSCQLSSDWPPLLKQRQQLPFVRASLMNQLTMDGNFPPTNGYQFVISNG
GDAMAAYQPQLLVQQQQPQQHNNPHANTIGSLQSLGNLKNMSYRPVPDDQ
VEPNSFGTDFLDMTGDDLDLGILQEIGGLPMSGQSSTMGMPQHPTTVPPT
KVQNTPAINSQQNPSSQGHLTLGTFQNGRVEAVALQSLSIPAGNGPLNTL
QAVHRGGHQIVALNGQQGLLQIVKPEYLQQQQQIQQQQQIQQPQQPAPSS
QNQATFIDASDGQYQLNADQVAKRQRIEDELTLEQKVLASKERNRENARN
TRLRKKLYIEKLKAQVDELQAAQERREREERVR
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