prot_H-akashiwo_Contig9.23.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig9.23.1
Unique Nameprot_H-akashiwo_Contig9.23.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length56
Homology
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: K9UHM0_CHAP6 (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=2 Tax=Chamaesiphon TaxID=217161 RepID=K9UHM0_CHAP6)

HSP 1 Score: 62.4 bits (150), Expect = 5.880e-10
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTGVQVT 52
            +VLGRT  NR  +F GD+EELRGK+V VKITEARA SLTG +VT
Sbjct:  404 QVLGRTRGNRLTFFNGDIEELRGKVVPVKITEARAFSLTGDRVT 447          
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: A0A0V7ZU19_9CYAN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V7ZU19_9CYAN)

HSP 1 Score: 61.2 bits (147), Expect = 1.500e-9
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTGVQV 51
            +V+GRT  NR  +FAGD++EL+GK++KVKITE RA SLTG Q+
Sbjct:  405 QVMGRTRGNRLTFFAGDIKELKGKLIKVKITEVRAFSLTGEQI 447          
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: UPI00036EB697 (MiaB/RimO family radical SAM methylthiotransferase n=1 Tax=Fischerella muscicola TaxID=92938 RepID=UPI00036EB697)

HSP 1 Score: 60.5 bits (145), Expect = 1.500e-9
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTGVQV 51
            +V+GRT TNR  +F GD+ EL+GK+VKVKITE RA SLTG  V
Sbjct:  184 QVMGRTRTNRLTFFTGDINELKGKLVKVKITEVRAFSLTGEPV 226          
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: A0A8J7IUW0_9CYAN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7IUW0_9CYAN)

HSP 1 Score: 60.8 bits (146), Expect = 2.060e-9
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTG 48
            +V+GRT  NR  +FAGD+E L+GKIVKVKITEARA SLTG
Sbjct:  404 QVMGRTQGNRLTFFAGDIEALKGKIVKVKITEARAFSLTG 443          
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: A0A0M0SNK6_9CYAN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=8 Tax=Nostocales TaxID=1161 RepID=A0A0M0SNK6_9CYAN)

HSP 1 Score: 60.5 bits (145), Expect = 2.810e-9
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTGVQV 51
            +V+GRT TNR  +F GD+ EL+GK+VKVKITE RA SLTG  V
Sbjct:  388 QVMGRTRTNRLTFFTGDIHELKGKLVKVKITEVRAFSLTGEPV 430          
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: A0A0C2LEB1_9CYAN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=22 Tax=Nostocales TaxID=1161 RepID=A0A0C2LEB1_9CYAN)

HSP 1 Score: 60.1 bits (144), Expect = 3.840e-9
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTGVQV 51
            +V+GRT  NR  +FAGD+ EL+GK+VKVKITE RA SLTG ++
Sbjct:  388 QVMGRTRGNRLTFFAGDINELKGKLVKVKITEVRAFSLTGEEI 430          
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: A0A6P0NKQ9_9CYAN (TRAM domain-containing protein (Fragment) n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NKQ9_9CYAN)

HSP 1 Score: 55.8 bits (133), Expect = 4.650e-9
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTGV 49
            +V+GRT  NR  +F GD+ EL+GK+V VKITE RA SLTG+
Sbjct:   25 QVMGRTRGNRLTFFDGDINELKGKLVNVKITEVRAFSLTGI 65          
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: K9S3R7_9CYAN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S3R7_9CYAN)

HSP 1 Score: 59.7 bits (143), Expect = 5.250e-9
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTG 48
            +V+GRT  NR  +FAGD++ELRG++VKVKITE RA SLTG
Sbjct:  404 QVMGRTRGNRLTFFAGDIQELRGQVVKVKITEVRAFSLTG 443          
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: A0A6B3M407_9CYAN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A6B3M407_9CYAN)

HSP 1 Score: 59.7 bits (143), Expect = 5.260e-9
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTGVQVTTS 54
            +V+GRT  NR  +FAGD+EEL+GK+V+VKIT+ RA SLTG +V  S
Sbjct:  404 QVMGRTRGNRLTFFAGDIEELKGKLVEVKITQVRAFSLTGERVNES 449          
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Match: A0A0T7BZA8_9CYAN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A0T7BZA8_9CYAN)

HSP 1 Score: 59.3 bits (142), Expect = 7.170e-9
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    9 KVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTGV 49
            +V+GRT  NR  +F GD++EL+GK+VKVKITE RA SLTGV
Sbjct:  388 QVMGRTGGNRLTFFTGDIQELKGKLVKVKITEVRAFSLTGV 428          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig9.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K9UHM0_CHAP65.880e-1070.45tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A0V7ZU19_9CYAN1.500e-962.79tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
UPI00036EB6971.500e-965.12MiaB/RimO family radical SAM methylthiotransferase... [more]
A0A8J7IUW0_9CYAN2.060e-972.50tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A0M0SNK6_9CYAN2.810e-965.12tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A0C2LEB1_9CYAN3.840e-962.79tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A6P0NKQ9_9CYAN4.650e-960.98TRAM domain-containing protein (Fragment) n=1 Tax=... [more]
K9S3R7_9CYAN5.250e-967.50tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A6B3M407_9CYAN5.260e-960.87tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A0T7BZA8_9CYAN7.170e-965.85tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002792TRAM domainPFAMPF01938TRAMcoord: 11..49
e-value: 9.1E-8
score: 32.0
IPR002792TRAM domainPROSITEPS50926TRAMcoord: 1..52
score: 9.772804

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig9contigH-akashiwo_Contig9:1544473..1555413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig9.23.1mRNA_H-akashiwo_Contig9.23.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig9 1544473..1555413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig9.23.1 ID=prot_H-akashiwo_Contig9.23.1|Name=mRNA_H-akashiwo_Contig9.23.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=56bp
MLIPPLLLKVLGRTTTNRPVYFAGDVEELRGKIVKVKITEARAHSLTGVQ
VTTSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002792TRAM_dom