prot_H-akashiwo_Contig886.8.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig886.8.1
Unique Nameprot_H-akashiwo_Contig886.8.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length119
Homology
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: A0A7S2SAZ3_9STRA (Ribonucloprotein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAZ3_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.060e-49
Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKTKKDFPAQDLYDELVSECKEMGVAY 118
            MA KKLTKK H LVKKAS  K +RRGVKEVVK+LRK E+G C+IAGDISPIDVISHIP+FCE++ VPYIYVPSKQDLGAAA TKRPTSVVLV+ K  F  ++LYD+L+ E +E    +
Sbjct:   53 MAPKKLTKKLHXLVKKASSAKGIRRGVKEVVKALRKNEKGICVIAGDISPIDVISHIPVFCEEKDVPYIYVPSKQDLGAAASTKRPTSVVLVQCKPQFEEKELYDKLMEEVRESAPTF 170          
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: A0A7S2UX33_9STRA (Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX33_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.330e-48
Identity = 82/118 (69.49%), Postives = 92/118 (77.97%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKTKKDFPAQDLYDELVSECKEMGVAY 118
            MA  KLTKK HKLVKKAS  KC+RRGVKEVVKSL+K E+G CIIAGDISPIDVISHIPI CE+  +PYIYVPSKQDLG AALTKRPTS + V  K  F  Q+LYD +V+E     + Y
Sbjct:   42 MAPPKLTKKMHKLVKKASKAKCLRRGVKEVVKSLKKKEKGLCIIAGDISPIDVISHIPILCEEASIPYIYVPSKQDLGGAALTKRPTSTIFVVPKGKFKDQELYDSMVTETNARAIEY 159          
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: A0A7S2RHT0_9STRA (Ribonucloprotein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RHT0_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.240e-46
Identity = 78/121 (64.46%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKT----KKDFPAQDLYDELVSECKEMGVA 117
            +ASKK TK+AHKLVKKAS VK +RRGVKEVVK +RKG++G CI+AGD+ PIDV+SH+P+ CE+ G+PY+YVPSKQDLGAAA TKRPTSVVL++     KK F A+D+Y  L  E K    A
Sbjct:   38 LASKKSTKRAHKLVKKASSVKHIRRGVKEVVKGIRKGDKGLCILAGDVFPIDVVSHLPVLCEEAGIPYLYVPSKQDLGAAASTKRPTSVVLIRDDVLQKKGFDAEDIYKTLFQEAKGFDPA 158          
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: A0A7S3MHC4_9STRA (Ribonucloprotein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHC4_9STRA)

HSP 1 Score: 154 bits (388), Expect = 8.260e-46
Identity = 80/116 (68.97%), Postives = 90/116 (77.59%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKTKKDFPAQDLYDELVSECKEMGV 116
            +ASKK TKK HKLVKKAS  K VRRGVKEVVK+LRKG +GFCIIAGDISPIDV+ H+PI CED+ +PY YVPSK DLGAAA TKRPTS +LV  K  F    LYD+L  E +E  V
Sbjct:   25 LASKKTTKKLHKLVKKASQAKFVRRGVKEVVKALRKGSKGFCIIAGDISPIDVVVHLPIMCEDRRIPYFYVPSKLDLGAAASTKRPTSCILVTPKDSFSEMSLYDKLFKEAQEALV 140          
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: A0A7S2LTM4_9STRA (Ribonucloprotein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LTM4_9STRA)

HSP 1 Score: 154 bits (388), Expect = 9.640e-46
Identity = 78/114 (68.42%), Postives = 90/114 (78.95%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKTKKDFPAQDLYDELVSECKEM 114
            +ASKK TK+AHKLVKKA+  KC RRGVKEV+K +RKGE+G C+IAGDI P+DVISH+PI  E+ G PYI+VPSKQDLGAAA TKRPTS VLV  K  F  QDLYD L+ E K  
Sbjct:   32 LASKKSTKRAHKLVKKATSSKCCRRGVKEVIKGIRKGEKGLCVIAGDIFPLDVISHLPILLEETGSPYIFVPSKQDLGAAASTKRPTSCVLVSPKVGFDGQDLYDGLLDEAKSF 145          
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: A0A482SDH7_9ARCH (Ribosomal L7Ae/L30e/S12e/Gadd45 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDH7_9ARCH)

HSP 1 Score: 152 bits (385), Expect = 1.350e-45
Identity = 77/114 (67.54%), Postives = 93/114 (81.58%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKTKKD-FPAQDLYDELVSECKE 113
            +A KK TKK HKLVKKAS  K VRRGVKEVVK++RKGE+GFC++AGDISP+DV+SH+P+ CED+ +PY +VPSK DLGAAA TKRPTSVVL+ T KD F    LY +LV E K+
Sbjct:    8 LAPKKTTKKLHKLVKKASQAKIVRRGVKEVVKAIRKGEKGFCVLAGDISPVDVLSHLPVMCEDREIPYFFVPSKIDLGAAACTKRPTSVVLISTPKDNFTEMALYSKLVKEAKD 121          
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: A0A6U3Z8L3_9STRA (Ribonucloprotein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z8L3_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.530e-45
Identity = 80/113 (70.80%), Postives = 94/113 (83.19%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKT-KKDFPAQDLYDELVSECK 112
            +A KK TK+AHKLVKKAS  K +RRGVKEVVK LRKG++G  I+AGDI PIDVISH+PI  E+  VPY++VPSKQDLG+AA TKRPTS VLVKT KKDF A+D+YD+LV E K
Sbjct:   39 LACKKSTKRAHKLVKKASSSKMIRRGVKEVVKGLRKGDKGLAILAGDIFPIDVISHLPILLEENNVPYLFVPSKQDLGSAASTKRPTSCVLVKTPKKDFDAKDIYDQLVEEAK 151          
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: B5Y3J9_PHATC (Ribonucloprotein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3J9_PHATC)

HSP 1 Score: 152 bits (384), Expect = 3.790e-45
Identity = 79/114 (69.30%), Postives = 93/114 (81.58%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKT-KKDFPAQDLYDELVSECKE 113
            +ASKK TKKAHKLVKKA+  K +RRGVKEVVK LRKGE G  I+AGDI P+DVISH+P+  E++ +PY++VPSKQDLGAAA TKRPTS VL++  KKDF  QDLYD LV E KE
Sbjct:   27 LASKKSTKKAHKLVKKAAAAKHIRRGVKEVVKGLRKGETGVAILAGDIYPVDVISHLPVLLEEKNIPYVFVPSKQDLGAAASTKRPTSCVLIRVPKKDFDGQDLYDALVKEGKE 140          
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: A0A7S1YDK8_9STRA (Ribonucloprotein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YDK8_9STRA)

HSP 1 Score: 152 bits (383), Expect = 6.880e-45
Identity = 77/114 (67.54%), Postives = 94/114 (82.46%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKT-KKDFPAQDLYDELVSECKE 113
            +ASKK TKK HKLVKKASGVK +RRGVKEVVK +RKGE+G  I+AGDI P+DV+SH+P+  E+  +PYI+VPSKQDLGAAA TKRPTS VLV+T KK+F  QD+YD ++ E  E
Sbjct:   39 LASKKSTKKLHKLVKKASGVKYIRRGVKEVVKXVRKGEKGLAILAGDIYPLDVVSHLPVLLEENNIPYIFVPSKQDLGAAASTKRPTSCVLVRTPKKEFEGQDIYDTMMKEANE 152          
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Match: A0A1Z5KN44_FISSO (Ribonucloprotein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN44_FISSO)

HSP 1 Score: 149 bits (375), Expect = 1.000e-43
Identity = 78/115 (67.83%), Postives = 91/115 (79.13%), Query Frame = 0
Query:    1 MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISPIDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKT-KKDFPAQDLYDELVSECKEM 114
            +ASKK TKKAHKLVKKA+  K VRRGVKEVVK LRKGE G  I+AGDI P+DVISH+P+  E++ +PYI+VPSK DLGAAA TKRPTS VL++T KK F  QDL+D L  E KE 
Sbjct:   31 LASKKSTKKAHKLVKKAAASKHVRRGVKEVVKGLRKGETGLAILAGDIYPVDVISHLPVLLEEKNIPYIFVPSKHDLGAAASTKRPTSCVLIRTPKKSFDGQDLFDALAKEAKEF 145          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig886.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2SAZ3_9STRA2.060e-4970.34Ribonucloprotein n=1 Tax=Rhizochromulina marina Ta... [more]
A0A7S2UX33_9STRA2.330e-4869.49Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID... [more]
A0A7S2RHT0_9STRA3.240e-4664.46Ribonucloprotein n=1 Tax=Eucampia antarctica TaxID... [more]
A0A7S3MHC4_9STRA8.260e-4668.97Ribonucloprotein n=1 Tax=Spumella elongata TaxID=8... [more]
A0A7S2LTM4_9STRA9.640e-4668.42Ribonucloprotein n=1 Tax=Leptocylindrus danicus Ta... [more]
A0A482SDH7_9ARCH1.350e-4567.54Ribosomal L7Ae/L30e/S12e/Gadd45 family protein n=1... [more]
A0A6U3Z8L3_9STRA3.530e-4570.80Ribonucloprotein n=1 Tax=Ditylum brightwellii TaxI... [more]
B5Y3J9_PHATC3.790e-4569.30Ribonucloprotein n=2 Tax=Phaeodactylum tricornutum... [more]
A0A7S1YDK8_9STRA6.880e-4567.54Ribonucloprotein n=1 Tax=Grammatophora oceanica Ta... [more]
A0A1Z5KN44_FISSO1.000e-4367.83Ribonucloprotein n=2 Tax=Fistulifera solaris TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 23..37
score: 32.73
coord: 42..55
score: 35.39
coord: 58..68
score: 52.89
coord: 68..82
score: 45.76
IPR002415H/ACA ribonucleoprotein complex, subunit Nhp2-likePRINTSPR00883NUCLEARHMGcoord: 9..24
score: 33.75
coord: 26..36
score: 47.27
coord: 70..82
score: 53.85
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..116
e-value: 6.4E-43
score: 147.4
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 3..99
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 9..98
e-value: 3.8E-26
score: 90.6
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 2..97
NoneNo IPR availablePANTHERPTHR23105:SF146SUBFAMILY NOT NAMEDcoord: 2..97
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 61..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig886contigH-akashiwo_Contig886:405535..411363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig886.8.1mRNA_H-akashiwo_Contig886.8.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig886 405106..411609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig886.8.1 ID=prot_H-akashiwo_Contig886.8.1|Name=mRNA_H-akashiwo_Contig886.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=119bp
MASKKLTKKAHKLVKKASGVKCVRRGVKEVVKSLRKGEQGFCIIAGDISP
IDVISHIPIFCEDQGVPYIYVPSKQDLGAAALTKRPTSVVLVKTKKDFPA
QDLYDELVSECKEMGVAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR002415H/ACA_rnp_Nhp2-like
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR004037Ribosomal_L7Ae_CS