prot_H-akashiwo_Contig877.11.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig877.11.1
Unique Name	prot_H-akashiwo_Contig877.11.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	401

Homology

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BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: A0A835YPU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU5_9STRA)

HSP 1 Score: 359 bits (921), Expect = 7.470e-118
Identity = 167/209 (79.90%), Postives = 192/209 (91.87%), Query Frame = 0

Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA 209
            MS AIEQRNQDATCYCGNLDE  T++L+WELM+QAGPVVNVHMPKDKV+  HQGYGFVEFRSEEDA+Y IKI+NM+KL+GKP+RVNKAS DRK  DVGANLFIG L+ EVDEKLLYDTFSAFGFIT TPK+MRDP+TG SKG+GFVSYD FEA+DLAIECM+ Q+LCNRQIVVQ+A+K+D+ GERHGS AERLLAANNP+R++P+TMFA
Sbjct:    1 MSAAIEQRNQDATCYCGNLDEAATEELLWELMIQAGPVVNVHMPKDKVTNTHQGYGFVEFRSEEDAEYAIKILNMVKLFGKPLRVNKASSDRKAQDVGANLFIGQLDPEVDEKLLYDTFSAFGFITNTPKVMRDPETGASKGYGFVSYDGFEASDLAIECMNGQFLCNRQIVVQYAFKRDSHGERHGSLAERLLAANNPLRLKPHTMFA 209

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BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: A0A7S2SH37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH37_9STRA)

HSP 1 Score: 351 bits (900), Expect = 3.490e-117
Identity = 174/229 (75.98%), Postives = 199/229 (86.90%), Query Frame = 0

Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPM--RMRPNTMFAENRDAPPMPPMPGHGPPP 227
            MS AIEQRNQDATCYCGNLD+ V ++L+WELMLQAGPVV++HMPKDKV+  HQG+GFVEFRSEEDADY IKIMNM+KL+ KP+RVNKASQDRKT+DVGANLFIGNL+ +VDEKLLYDTFSAFG +T  PK+MRDPDTG SKGFGFVSYDSFEAADLAIECM+ Q+L NR I VQFA+K+D++GERHGSQAER+LAANNP+  RM P+TMFA     PP  P  G G PP
Sbjct:    1 MSAAIEQRNQDATCYCGNLDDQVEEELLWELMLQAGPVVSLHMPKDKVTNSHQGFGFVEFRSEEDADYAIKIMNMVKLFDKPIRVNKASQDRKTMDVGANLFIGNLDAQVDEKLLYDTFSAFGGLTDQPKVMRDPDTGLSKGFGFVSYDSFEAADLAIECMNGQFLSNRAIQVQFAFKRDSQGERHGSQAERMLAANNPLARRMAPHTMFAAG---PPGMPSGGMGGPP 226

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BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: F0YAQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAQ8_AURAN)

HSP 1 Score: 350 bits (898), Expect = 9.690e-116
Identity = 159/204 (77.94%), Postives = 189/204 (92.65%), Query Frame = 0

Query:    5 IEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMF 208
            +EQRNQDATCY GNLDE +T++L+WE+MLQAGP+ NVH+P+DKV+G HQGYGFVEFRSEEDADY +K+MNM+KL+GKP+RVNKASQD+KTL+VGANLF+G L+ +VDEKLLYDTFSAFG IT TPKIMRDPDTGNSKGFGFVSYDSFEA+DLAIECMHNQ+LCN+Q+ V +A+K+D+K ERHGSQAERLLAANNPM  +P+ MF
Sbjct:    6 VEQRNQDATCYVGNLDEQLTEELLWEMMLQAGPIGNVHLPRDKVTGSHQGYGFVEFRSEEDADYALKVMNMVKLFGKPLRVNKASQDKKTLEVGANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASDLAIECMHNQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPMSAKPHAMF 209

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BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: A0A6H5KI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI11_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 3.460e-114
Identity = 161/209 (77.03%), Postives = 187/209 (89.47%), Query Frame = 0

Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA 209
            MS +IEQRNQDATCY GNLD  VT+ L+WELM+QAGPV NVHMPKDK++G HQG+GFVEFRSE+DA+Y IKIMNM+KL+GKP+RVNKASQDRK  DVGANLFIG L+ +VDEK+LYDTFSAFGFIT TPK+MRDPDTG SKG+GFVSYD FEA+D AIECMHNQYLCNRQI VQ+AYKKD +GERHG QAERLLA+NNP + + +T+F+
Sbjct:    1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFS 209

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BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: D8LT41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT41_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 2.240e-112
Identity = 161/209 (77.03%), Postives = 187/209 (89.47%), Query Frame = 0

Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA 209
            MS +IEQRNQDATCY GNLD  VT+ L+WELM+QAGPV NVHMPKDK++G HQG+GFVEFRSE+DA+Y IKIMNM+KL+GKP+RVNKASQDRK  DVGANLFIG L+ +VDEK+LYDTFSAFGFIT TPK+MRDPDTG SKG+GFVSYD FEA+D AIECMHNQYLCNRQI VQ+AYKKD +GERHG QAERLLA+NNP + + +T+F+
Sbjct:    1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFS 209

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BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: A0A7S3ZVH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVH1_9STRA)

HSP 1 Score: 339 bits (870), Expect = 2.430e-112
Identity = 155/211 (73.46%), Postives = 189/211 (89.57%), Query Frame = 0

Query:    5 IEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMR-MRPNTMFAENRDA 214
            +EQRNQDATCY GNLDE +T++L+WE+MLQAGPV NVH+P+DKV+G HQGYGFVEFRSEEDADY +K+MNM+KL+GKP+RVNKASQDR+ ++VGANLF+G L+G+VDEKLLYDTFSAFG I+ TPK+MRDPDTG SKG+GFVSYDSFEA+DLAIECMH Q+LCN+Q+ V +A+K+D+K ERHGSQAERLLAANNP   ++P+TMF     A
Sbjct:    6 VEQRNQDATCYVGNLDEQLTEELLWEMMLQAGPVSNVHLPRDKVTGSHQGYGFVEFRSEEDADYALKVMNMVKLFGKPLRVNKASQDRRAVEVGANLFVGGLDGDVDEKLLYDTFSAFGTISETPKVMRDPDTGGSKGYGFVSYDSFEASDLAIECMHGQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPNNAVQPHTMFGTGAPA 216

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BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: A0A0W8D7L6_PHYNI (Splicing factor 3B subunit 4 n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8D7L6_PHYNI)

HSP 1 Score: 335 bits (858), Expect = 7.250e-111
Identity = 164/225 (72.89%), Postives = 189/225 (84.00%), Query Frame = 0

Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA------ENRDAPPMPP 219
            MS AIEQRNQDAT Y GNLD+ VT++L+WELMLQAG V NVHMP+DKV+G HQ YGFVEFR+EE A+Y +K++NMI+LYG+ +RV KAS DRK LDVGANLFIGNL+ EVDEKLLYDTFSAFG I  TPKIMRDPDT  SKGFGFVS+DSFEAADLAIECMH QYLCNRQ+VVQ+A+KKD+  ERHGS+AERLLA  NP +++P+TMFA         DAPP PP
Sbjct:    1 MSAAIEQRNQDATVYVGNLDDRVTEELLWELMLQAGSVCNVHMPRDKVTGAHQNYGFVEFRTEECAEYAVKVLNMIQLYGRVIRVKKASNDRKNLDVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDTKASKGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQRNPNKLKPHTMFAFTAGAAPGMDAPPPPP 225

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BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: A0A484EDR7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDR7_BRELC)

HSP 1 Score: 333 bits (855), Expect = 1.800e-110
Identity = 164/228 (71.93%), Postives = 192/228 (84.21%), Query Frame = 0

Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFAENRDAPPMPPMPGHGPPPP 228
            MS  IEQRNQDAT Y GNLD+ VT++L+WELMLQAG V NVHMP+DKVSG HQ YGFVEFR+EE A+Y +K++NMI+LYG+ +RV KAS DRK+LDVGANLFIGNL+ EVDEKLLYDTFSAFG I  TPKIMRDPD+  SKGFGF+S+DSFEAADLAIECMH QYLCNRQ+VVQ+A+KKD+  ERHGS+AERLLA  NP +++P+TMFA    APP   +P   PPPP
Sbjct:    1 MSAGIEQRNQDATVYVGNLDDRVTEELLWELMLQAGSVCNVHMPRDKVSGAHQNYGFVEFRAEECAEYAVKVLNMIQLYGRVIRVKKASNDRKSLDVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDSKASKGFGFISFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQTNPNKLKPHTMFAFTTGAPPGMEVP---PPPP 225

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BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: A0A3F2RG69_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG69_9STRA)

HSP 1 Score: 333 bits (854), Expect = 3.590e-110
Identity = 160/223 (71.75%), Postives = 194/223 (87.00%), Query Frame = 0

Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA-ENRDAPPMPPMPG 222
            MS AIEQRNQDAT Y GNLD+ V+++L+WELMLQAG V NVHMP+DKV+G HQ YGFVEFR+EE ++Y +K++NMI+L+GK +RV KASQD+K LDVGANLF+GNL+ EVDEKLLYDTFSAFG I  TPK+MRDPDT  S+GFGFVS+DSFEAADLAIECM+ QYLCNRQ+VVQ+AYKKD++ ERHGS+AERLLA  NP +++P+T+FA  N+ APP PPM G
Sbjct:    1 MSAAIEQRNQDATVYVGNLDDRVSEELLWELMLQAGSVCNVHMPRDKVTGSHQNYGFVEFRTEECSEYAVKVLNMIQLFGKVIRVKKASQDKKNLDVGANLFLGNLDPEVDEKLLYDTFSAFGGIIETPKVMRDPDTKLSRGFGFVSFDSFEAADLAIECMNGQYLCNRQVVVQYAYKKDSQNERHGSEAERLLAQRNPNKLKPHTLFAFTNQGAPPPPPMGG 223

[Close]

BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Match: A0A8K1C865_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C865_PYTOL)

HSP 1 Score: 332 bits (851), Expect = 2.090e-109
Identity = 165/226 (73.01%), Postives = 189/226 (83.63%), Query Frame = 0

Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA----ENRDAPPMPPMPG 222
            MS AIEQRNQDAT Y GNLD+ V+++L+WELM+QAG V+NVHMP DKV+  HQ YGFVEFR+EE ADY IKIMNMI+LYGK +RV KASQDRK LD+GANLFIGNL+ EVDEKLLYDTFSAFG I  TPKIMRDPDT  S+GFGF+SYDSFEAADLAIECM+ QYL NRQ+VVQ+A+KKD+K ERHGS+AERLLA +NP R++PNT FA    E    PP PP  G
Sbjct:    1 MSAAIEQRNQDATVYVGNLDDRVSEELLWELMVQAGSVINVHMPTDKVTNRHQNYGFVEFRTEECADYAIKIMNMIQLYGKVVRVKKASQDRKNLDIGANLFIGNLDHEVDEKLLYDTFSAFGGIIETPKIMRDPDTKMSRGFGFISYDSFEAADLAIECMNGQYLSNRQVVVQYAFKKDSKSERHGSEAERLLAQSNPNRLKPNTRFAFTGTEMMGVPPPPPAMG 226

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig877.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YPU5_9STRA	7.470e-118	79.90	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2SH37_9STRA	3.490e-117	75.98	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
F0YAQ8_AURAN	9.690e-116	77.94	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A6H5KI11_9PHAE	3.460e-114	77.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LT41_ECTSI	2.240e-112	77.03	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S3ZVH1_9STRA	2.430e-112	73.46	Hypothetical protein (Fragment) n=1 Tax=Pelagomona...	[more]
A0A0W8D7L6_PHYNI	7.250e-111	72.89	Splicing factor 3B subunit 4 n=11 Tax=Peronosporac...	[more]
A0A484EDR7_BRELC	1.800e-110	71.93	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A3F2RG69_9STRA	3.590e-110	71.75	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
A0A8K1C865_PYTOL	2.090e-109	73.01	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 100..174 e-value: 1.4E-22 score: 91.0 coord: 13..86 e-value: 3.0E-21 score: 86.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 101..171 e-value: 7.2E-17 score: 61.0 coord: 15..83 e-value: 1.3E-14 score: 53.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 12..90 score: 15.203922
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 99..178 score: 16.14197
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..97 e-value: 2.7E-24 score: 87.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 98..188 e-value: 7.5E-24 score: 86.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..297
None	No IPR available	PANTHER	PTHR15241:SF330	SPLICING FACTOR 3B SUBUNIT 4	coord: 6..340
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 6..340
IPR034158	SF3B4, RNA recognition motif 1	CDD	cd12334	RRM1_SF3B4	coord: 14..87 e-value: 3.40806E-52 score: 167.0
IPR034159	SF3B4, RNA recognition motif 2	CDD	cd12335	RRM2_SF3B4	coord: 98..180 e-value: 8.27437E-56 score: 176.331
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 11..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig877	contig	H-akashiwo_Contig877:259745..260947 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig877.11.1	mRNA_H-akashiwo_Contig877.11.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig877 259745..260953 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig877.11.1 ID=prot_H-akashiwo_Contig877.11.1|Name=mRNA_H-akashiwo_Contig877.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=401bp
MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSG
HHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGAN
LFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDS
FEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPM
RMRPNTMFAENRDAPPMPPMPGHGPPPPRPPMGLPPPPPSGMVPPPPSMP
PPPPGAVPPPQHASTKTSNRSAATATTKHAPTASGRAATSSTAAATDASG
RVRAARYATSTPQAATTRQRTAAATPTGPVWRPSSTGPVRGTTAHGDAPC
PTAHAAAAFPGASSSSGPGDGHAPTAPATRTPTAPTNARGSSTTTSSTAS
S

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR034158	SF3B4_RRM1
IPR034159	SF3B4_RRM2
IPR035979	RBD_domain_sf