prot_H-akashiwo_Contig87.11.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig87.11.1
Unique Nameprot_H-akashiwo_Contig87.11.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length251
Homology
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Match: A0A7S2V7G6_9STRA (Translocon-associated protein subunit alpha n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7G6_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.690e-42
Identity = 80/194 (41.24%), Postives = 117/194 (60.31%), Query Frame = 0
Query:    2 AYDDEDLVVE--EEVIEAQPARPAVSMTREQRAMQGHPLTNMPPPSDDMVAAYYFPKHPDLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFFIQNFTMKPVGEAMSAGVEYTLAYDIQLHPQLPPNAYRLAASVFYQDGQRWYSSACVNETVTLFHADPAFSPQDLLKLGTTLGAGALFLYVFFT 193
            A DD+DLV E   E  E   A    +  +  R    HPLT+MP  S  +   YYFP++PD + PIG  V +LCH EN G+ ++N++AIMGSLN  ++FNF +QN+++KP+G  +  G+E+T  Y+ Q+HP L P  Y +A ++FY+D +  +SS   N TV LF+   A S  D++KL  TL  G   ++   T
Sbjct:   44 ADDDDDLVAEVVNEEAEXXEAPEYAAPRKLHRRGFTHPLTDMPDASPGITTQYYFPEYPDQRFPIGDSVTVLCHFENAGDEEYNVTAIMGSLNSPFDFNFHVQNYSLKPIGLTVGPGMEFTFEYNFQIHPNLEPVEYVVATTIFYEDEEESFSSTFFNSTVELFYPTAALSLWDMVKLVVTLVGGGAVVWFCLT 237          
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Match: A0A7S3GTR2_9STRA (Translocon-associated protein subunit alpha n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GTR2_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.610e-24
Identity = 52/130 (40.00%), Postives = 76/130 (58.46%), Query Frame = 0
Query:   43 PPSDDMVAAYYFPKHPDLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFFIQNFTMKPVGEAMSAGVEYTLAYDIQLHPQLPPNAYRLAASVFYQDGQRWYSSACVNETVTLFHADPAFSPQ 172
            P + D+  + YFP+H D + PIG+ V  LCH  N G  ++N+SAIMGSLN  + F    QN++ K  G  +  G E T  Y+ QLH +L P  Y+LA +VFY+  Q  +S+   N+TV L++    F  +
Sbjct:    1 PSAVDVETSPYFPEHTDQKFPIGETVIALCHFINDGSENYNVSAIMGSLNSPFEFGHHFQNYSYKTFGTIVKPGEEITFKYNFQLHKELEPVDYQLAITVFYESEQHSFSTTFFNQTVELYYPTSEFDME 130          
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Match: A0A150GLN7_GONPE (Translocon-associated protein subunit alpha n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GLN7_GONPE)

HSP 1 Score: 93.6 bits (231), Expect = 2.380e-19
Identity = 56/171 (32.75%), Postives = 90/171 (52.63%), Query Frame = 0
Query:   24 VSMTREQRAMQGHPLTNMPPPSDDMVAAYYFPKHPDLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFFIQNFTMKPVGEAMSAGVEYTLAYDIQLHPQLPPNAYRLAASVFYQDGQRWYSSACVNETVTLFHADPAFSPQDLLKLGTTLGAGALFLYVFFTA 194
            +++   Q A + HPL+N+PP S ++   ++FP  P  Q   GQ V  +  + N     +NISAIMGSLN+  +F  +  NFT +   + ++ G E ++ Y       LPPN Y++A +VFY+  + + S+   N+TVT+            L+ G  +    +FLYV F A
Sbjct:   19 IAVAAGQEAPRAHPLSNLPP-SGEISTGFFFPDFPTRQFIAGQAVKTVLGIRNDASEPYNISAIMGSLNNAADFRAYYWNFTQQVYFQVVAPGKELSVEYTFLPPKDLPPNDYQVALTVFYEAAEGFKSTTFFNQTVTV------------LEKGQLIDWKLIFLYVIFIA 176          
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Match: A8JE83_CHLRE (Translocon-associated protein subunit alpha n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8JE83_CHLRE)

HSP 1 Score: 87.4 bits (215), Expect = 4.920e-17
Identity = 46/133 (34.59%), Postives = 76/133 (57.14%), Query Frame = 0
Query:   30 QRAMQGHPLTNMPPPSDDMVAAYYFPKHPDLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFFIQNFTMKPVGEAMSAGVEYTLAYDIQLHPQLPPNAYRLAASVFYQDGQRWYSSACVNETVTL 162
            Q A + HPLTN+PP + ++   ++FP+ P  Q   GQ V ++  + N+    +NISA+MGSLN+  +F  +  NFT +   + +    E ++ Y       LPPN Y++A +VFY+    + SS   N+TV++
Sbjct:   26 QEAPRAHPLTNLPP-AGEISTGFFFPEFPTKQFIAGQPVKVVVGIRNEAAEKYNISAVMGSLNNAQDFRAYYWNFTQQVYFQVVEPSKELSVEYTFLPPKDLPPNDYQVALTVFYEAADGFKSSTFFNQTVSV 157          
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Match: D8UBG5_VOLCA (Translocon-associated protein subunit alpha n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UBG5_VOLCA)

HSP 1 Score: 85.1 bits (209), Expect = 3.540e-16
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 0
Query:   34 QGHPLTNMPPPSDDMVAAYYFPKHPDLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFFIQNFTMKPVGEAMSAGVEYTLAYDIQLHPQLPPNAYRLAASVFYQDGQRWYSSACVNETVTLFHADPAFSPQDLLKLGTTLGAGALFLYVFF 192
            + HPLTN+PP + ++   Y+FP +P  Q   G+ V ++  + N+   ++NIS IMGSLN+   F  +  NFT +   + +    E ++ Y       LPPN Y++A +VFY+    + S+   N+T+T+            L+ G  +    +FLY  F
Sbjct:   30 RAHPLTNLPP-AGEISTGYFFPGYPTRQFIAGEPVKVVLGVRNEASENYNISMIMGSLNNAQEFRAYYWNFTQQLYFQIVEPSKELSVEYTFLPPKDLPPNDYQVALTVFYEAADGFKSTTFFNQTITV------------LEKGQLIDWKLIFLYAIF 175          
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Match: A0A836BUU8_9CHLO (Translocon-associated protein subunit alpha n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BUU8_9CHLO)

HSP 1 Score: 82.8 bits (203), Expect = 2.400e-15
Identity = 54/168 (32.14%), Postives = 84/168 (50.00%), Query Frame = 0
Query:   32 AMQGHPLTNMPPPSDDMVAAYYFPKHPDLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFFIQNFTMKPVGEAMSAGVEYTLAYDIQLHPQLPPNAYRLAASVFYQDGQRWYSSACVNETVTLFHADPAFSPQDLLKLGTTLGAGALFLYVFFTAAFGEG 199
            A + HPLTN+PP + ++   ++FP +P  Q   G  V ++  + N     +NISAIMGSLN+  +F  +  NFT +   + +    E ++ Y       LPPN Y++A +VFY+    + S+   N+T+T+             KL        +FLYV F A  G G
Sbjct:   26 APRAHPLTNLPP-AGEISHGHFFPDYPTRQFIAGLPVKVVLGIRNDAAEAYNISAIMGSLNNAEDFRAYYWNFTQQLYFQVVQPSKELSVEYSFLPPKDLPPNDYQVALTVFYEAADGFKSTTFFNQTITVNEQRQLID----WKL--------MFLYVIFIALVGAG 180          
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Match: A0A482S136_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S136_9ARCH)

HSP 1 Score: 77.0 bits (188), Expect = 1.590e-14
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0
Query:   29 EQRAMQGHPLTNMPPPSDDMVAAYYFPKHPDLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFFIQ 102
            E+  +  HPLT+MP  +DD+  A YFP  PDL+LPIG+ V  LCH  N G +++NISAIMGSLN  ++F    Q
Sbjct:   26 EEAKIMKHPLTDMPGGADDVQTASYFPDSPDLKLPIGEVVTSLCHFANTGRSNYNISAIMGSLNAPFDFRHHYQ 99          
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Match: A0A2J7ZWD4_9CHLO (Translocon-associated protein subunit alpha n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZWD4_9CHLO)

HSP 1 Score: 79.7 bits (195), Expect = 3.380e-14
Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 0
Query:   30 QRAMQGHPLTNMPPPSDDMVAAYYFPKHP-DLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFFIQNFTMKPVGEAMSAGVEYTLAYDIQLHPQLPPNAYRLAASVFYQDGQRWYSSACVNETVTL 162
            Q   + HPLTN+P  S ++    +FP +P     P GQ V ++  + N     +N+SAIMGSLN+   F  +  NFT +   + +    E ++ Y       LPPN Y++A +VFY+    + S+   N+TVT+
Sbjct:   25 QETPRSHPLTNLPA-SGEIATGVFFPDYPLSRHFPAGQPVKVVLGVHNDASEPYNVSAIMGSLNNAQQFGTYYWNFTQQLYFQIVEPSKELSVEYTFLPPKDLPPNDYQVALTVFYEAADGFKSTTFFNQTVTV 157          
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Match: F4QAX9_CAVFA (Translocon-associated protein subunit alpha n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QAX9_CAVFA)

HSP 1 Score: 75.1 bits (183), Expect = 3.590e-12
Identity = 45/149 (30.20%), Postives = 69/149 (46.31%), Query Frame = 0
Query:   44 PSDDMVAAYYFPKHPDLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFFIQNFTMKPVGEAMSAGVEYTLAYDIQLHPQLPPNAYRLAASVFYQDGQRWYSSACVNETVTLFHADPAFSPQDLLKLGTTLGAGALFLYVFF 192
            P  D+  +Y FP +P  + P G  + +L    N GE D+N+SAI  SLN       +IQN+T    G  +  G + TL Y       L P  + L  SV Y+  Q+ ++S   N T+ +     +F  +    +   LG  AL  Y+ +
Sbjct:   33 PVSDISFSYIFPDYPTKEFPAGSVIEVLIGFTNNGEVDYNVSAIYASLNHAQETKHYIQNYTKAEYGVNVKPGFQATLPYRFVPSEYLEPRQFALLVSVDYRADQQNFTSTFFNSTILIVEKPVSFDIEHFFLILFGLGLVALIGYIVY 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig87.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A7S2V7G6_9STRA5.690e-4241.24Translocon-associated protein subunit alpha n=1 Ta... [more]
A0A7S3GTR2_9STRA1.610e-2440.00Translocon-associated protein subunit alpha n=1 Ta... [more]
A0A150GLN7_GONPE2.380e-1932.75Translocon-associated protein subunit alpha n=1 Ta... [more]
A8JE83_CHLRE4.920e-1734.59Translocon-associated protein subunit alpha n=3 Ta... [more]
D8UBG5_VOLCA3.540e-1630.82Translocon-associated protein subunit alpha n=1 Ta... [more]
A0A836BUU8_9CHLO2.400e-1532.14Translocon-associated protein subunit alpha n=1 Ta... [more]
A0A482S136_9ARCH1.590e-1451.35Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A2J7ZWD4_9CHLO3.380e-1433.58Translocon-associated protein subunit alpha n=1 Ta... [more]
F4QAX9_CAVFA3.590e-1230.20Translocon-associated protein subunit alpha n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005595Translocon-associated protein (TRAP), alpha subunitPFAMPF03896TRAP_alphacoord: 10..194
e-value: 2.2E-15
score: 56.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..250
NoneNo IPR availablePANTHERPTHR12924TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNITcoord: 40..199
NoneNo IPR availablePANTHERPTHR12924:SF0TRANSLOCON-ASSOCIATED PROTEIN SUBUNIT ALPHAcoord: 40..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig87contigH-akashiwo_Contig87:580079..594942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig87.11.1mRNA_H-akashiwo_Contig87.11.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig87 579897..594974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig87.11.1 ID=prot_H-akashiwo_Contig87.11.1|Name=mRNA_H-akashiwo_Contig87.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=251bp
MAYDDEDLVVEEEVIEAQPARPAVSMTREQRAMQGHPLTNMPPPSDDMVA
AYYFPKHPDLQLPIGQKVGMLCHLENQGENDFNISAIMGSLNDNYNFNFF
IQNFTMKPVGEAMSAGVEYTLAYDIQLHPQLPPNAYRLAASVFYQDGQRW
YSSACVNETVTLFHADPAFSPQDLLKLGTTLGAGALFLYVFFTAAFGEGF
GGGSGKGRPPSSAAGRGDPNDQSDSKGSRKKGGSSSSKSSKKKVGGSKRK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005595TRAP_alpha