prot_H-akashiwo_Contig864.8.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig864.8.1
Unique Nameprot_H-akashiwo_Contig864.8.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length198
Homology
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A7S3Y5Q6_HETAK (Protein translocase subunit SecA n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5Q6_HETAK)

HSP 1 Score: 309 bits (792), Expect = 2.100e-96
Identity = 174/179 (97.21%), Postives = 175/179 (97.77%), Query Frame = 0
Query:    1 MSRCQGHLLLFFALLAIASYVALAFKSTGGAPRRIAHRSNSIYSDITQSGMLASRRSRAMIQMGLFDSVKKSADGSSVQENISNAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQ 179
            MSRCQGHLLLFFALLAIASYVALAF STGGAPRRIAHRSNSIYSDITQSGMLASRRSRAMIQMGLFDSVKKSADGSSVQENISNAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAE GRLAEMA G G+
Sbjct:    1 MSRCQGHLLLFFALLAIASYVALAFTSTGGAPRRIAHRSNSIYSDITQSGMLASRRSRAMIQMGLFDSVKKSADGSSVQENISNAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAE-GRLAEMATGEGK 178          
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A835ZJ09_9STRA (Protein translocase subunit SecA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ09_9STRA)

HSP 1 Score: 114 bits (284), Expect = 9.400e-26
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 0
Query:   49 SGMLASRRSRAMIQMGLFDSVKKSADGSSVQENISNAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGA--ALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQ 179
            S + A R SR+++ MGL D+  K AD  S  E     K + +YN RV +IN+LE  IE LSD+ L+ + A  RAR+A G    LD + EEAFA+VREAAWRVLELRHYDVQL+GGL L  E +LAEMA G G+
Sbjct:   61 SNVHAERGSRSLLSMGLLDNFMKPADAPSSFE----TKQLKQYNERVARINALEDSIETLSDEELRAKTAEFRARLAAGTEDTLDDILEEAFAVVREAAWRVLELRHYDVQLVGGLVL-HECKLAEMATGEGK 188          
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A6H5KYQ4_9PHAE (Chloroplast protein-transporting ATPase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ4_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 2.590e-24
Identity = 67/122 (54.92%), Postives = 86/122 (70.49%), Query Frame = 0
Query:   59 AMIQMGLFDSVKKS-ADGSSVQENISNAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQ 179
            A ++MGL D +  S AD  S     +NA ++  Y  R++ IN+LE EIE L+DD L+++    R R++ G  LD + EEAFA+VREAAWRVLELRHYDVQLMGGLAL  EG+LAEMA G G+
Sbjct:   84 AALRMGLLDDLLSSKADPVSA----ANADVLVSYETRIKNINALEDEIEDLTDDELRDKTQEFRDRLSKGEGLDDMIEEAFAVVREAAWRVLELRHYDVQLMGGLAL-HEGKLAEMATGEGK 200          
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A7S2ZNB4_9RHOD (Protein translocase subunit SecA n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNB4_9RHOD)

HSP 1 Score: 108 bits (271), Expect = 5.100e-24
Identity = 70/137 (51.09%), Postives = 96/137 (70.07%), Query Frame = 0
Query:   56 RSRAMIQMGLFDSVKKSADGSSVQE----------NISNA--KLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARV-AGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQ 179
            R R  +QMGLFD +KK+  G S +            +S+A  K+++ Y ARV KIN+LE E+E++ DD L+ RA++L+  V AG A+LD V EE+FALVREAA+R + LRHYDVQLMGG+AL  +G++AEMA G G+
Sbjct:   33 RGRVRVQMGLFDGLKKAVAGVSDETAGSEVFASTLGVSDAAQKILEAYQARVMKINALEDEVESVDDDGLRARASSLKKIVQAGEASLDDVLEESFALVREAAFRSIGLRHYDVQLMGGMAL-HDGKIAEMATGEGK 168          
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A7S4BQD3_CHRCT (Protein translocase subunit SecA n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BQD3_CHRCT)

HSP 1 Score: 102 bits (254), Expect = 9.640e-22
Identity = 62/128 (48.44%), Postives = 86/128 (67.19%), Query Frame = 0
Query:   56 RSRAMIQMGLFDSVK--KSADGSSVQ--ENISNAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQ 179
            R    ++MGL D+++  K A GS  +   + +N +LI+ Y  R E+IN LE EIE L D+ L ++    R R++ G + D + EEAFA+VREAAWR LELRHYDVQL+GG+AL  EG+LA+M  G G+
Sbjct:   58 RKLEQLRMGLLDALQPTKKAGGSDGEFYNSDANKQLIEGYTLRAERINELEDEIELLDDEQLAQKTVEFRERISNGESEDDLLEEAFAVVREAAWRTLELRHYDVQLVGGMAL-HEGKLAQMGTGEGK 184          
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A7S3DX02_9STRA (Chloroplast protein-transporting ATPase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DX02_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.990e-21
Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 0
Query:   57 SRAMIQMGLFDSVKKSADGSSVQENISNAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGAALDA-VTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQ 179
            S   + MG F+ +    D S  Q +  N + +   + RVEKINSLE  IE + DD L+ +    ++R+A G  ++  + EEAFA+VREAAWRVLELRHYDVQLMGGL L  +GRLAEMA G G+
Sbjct:  143 STTALSMGGFEDLLDGVDSS--QRSKENKEYLKTLSTRVEKINSLEPMIEEMEDDELEAKTKEFQSRLANGEDINGPLLEEAFAVVREAAWRVLELRHYDVQLMGGLIL-HDGRLAEMATGEGK 263          
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A7S0NZS3_9EUKA (Chloroplast protein-transporting ATPase (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NZS3_9EUKA)

HSP 1 Score: 99.8 bits (247), Expect = 7.340e-21
Identity = 60/130 (46.15%), Postives = 81/130 (62.31%), Query Frame = 0
Query:   58 RAMIQMGLFDSVKK--------SADGSSVQENISNAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQ 179
            R  ++MG  D++ K        +A G  V +  +N +L+  Y ARV++IN +E  IE L D  L  + A  RAR+  G + D + EEAFA+VREAAWR LELRHYDVQL+G +AL  EG LA+M  G G+
Sbjct:   74 RCTLRMGALDALLKRRSVEETAAAAGDGVYDAAANERLVQSYKARVDRINGMEDAIEELDDGQLAAKTAEFRARLESGESEDELLEEAFAVVREAAWRTLELRHYDVQLIGAMAL-HEGNLAQMGTGEGK 202          
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A0G4F1H6_9ALVE (Protein translocase subunit SecA n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F1H6_9ALVE)

HSP 1 Score: 98.2 bits (243), Expect = 2.870e-20
Identity = 59/112 (52.68%), Postives = 78/112 (69.64%), Query Frame = 0
Query:   84 NAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRAR----------------VAGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQ 179
            N +L+++YN RVEK+N+LEA++EALSD+ L E++   RAR                V    ALD + EEAFA+VREAAWRVLELRH+DVQL+GG+A+  +G LAEMA G G+
Sbjct:   82 NQELLNQYNERVEKVNALEAQMEALSDEELGEKSQEFRARLRTALGVEDLSQSNDPVREKKALDGILEEAFAVVREAAWRVLELRHFDVQLVGGMAM-HDGLLAEMATGEGK 192          
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A1B8J766_9HELI (Protein translocase subunit SecA n=1 Tax=Helicobacter sp. CLO-3 TaxID=211 RepID=A0A1B8J766_9HELI)

HSP 1 Score: 96.7 bits (239), Expect = 9.540e-20
Identity = 54/96 (56.25%), Postives = 73/96 (76.04%), Query Frame = 0
Query:   84 NAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQ 179
            N KLI KY  R + IN+LE+  +ALSDD LKER AAL+ +VA GA+LD+V E++FA+ REA+ R L +RH+DVQL+GG+ L  +GR+AEM  G G+
Sbjct:   10 NDKLIRKYKKRADAINALESTYKALSDDELKERFAALKEQVANGASLDSVLEDSFAITREASVRTLNMRHFDVQLIGGMVL-NDGRIAEMKTGEGK 104          
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Match: A0A7S0NGF1_9EUKA (Protein translocase subunit SecA n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NGF1_9EUKA)

HSP 1 Score: 96.7 bits (239), Expect = 9.640e-20
Identity = 60/133 (45.11%), Postives = 80/133 (60.15%), Query Frame = 0
Query:   64 GLFDSVKK----SADGSSVQENISNAKLIDKYNARVEKINSLEAEIEALSDDALKERAAALRARVAGGAALDAVTEEAFALVREAAWRVLELRHYDVQLMGGLALAEEGRLAEMARGRGQGGWWPRCPCSCTL 192
            GL D+++     +  G    +   N   +  Y  RV +IN LE EIE LSD+A+K +    R+R+A GA  D + EEAFA+VREAAWR +ELRHYDVQL+G +AL  EG LAEM  G G+        C+C +
Sbjct:    7 GLLDNLRSPDPSTLPGGGYWDEDQNTARVQGYTQRVNRINVLEDEIELLSDEAIKAKTEEFRSRLAAGATEDELLEEAFAVVREAAWRAIELRHYDVQLVGAMAL-HEGFLAEMGTGEGKS-----LTCTCAV 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig864.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y5Q6_HETAK2.100e-9697.21Protein translocase subunit SecA n=1 Tax=Heterosig... [more]
A0A835ZJ09_9STRA9.400e-2654.14Protein translocase subunit SecA n=1 Tax=Tribonema... [more]
A0A6H5KYQ4_9PHAE2.590e-2454.92Chloroplast protein-transporting ATPase n=1 Tax=Ec... [more]
A0A7S2ZNB4_9RHOD5.100e-2451.09Protein translocase subunit SecA n=1 Tax=Rhodosoru... [more]
A0A7S4BQD3_CHRCT9.640e-2248.44Protein translocase subunit SecA n=1 Tax=Chrysotil... [more]
A0A7S3DX02_9STRA3.990e-2150.00Chloroplast protein-transporting ATPase (Fragment)... [more]
A0A7S0NZS3_9EUKA7.340e-2146.15Chloroplast protein-transporting ATPase (Fragment)... [more]
A0A0G4F1H6_9ALVE2.870e-2052.68Protein translocase subunit SecA n=1 Tax=Chromera ... [more]
A0A1B8J766_9HELI9.540e-2056.25Protein translocase subunit SecA n=1 Tax=Helicobac... [more]
A0A7S0NGF1_9EUKA9.640e-2045.11Protein translocase subunit SecA n=1 Tax=Phaeocyst... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..118
NoneNo IPR availablePANTHERPTHR30612:SF7PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTICcoord: 81..179
IPR011115SecA DEAD-like, N-terminalSMARTSM00957SecA_DEAD_2coord: 78..197
e-value: 3.0E-4
score: -263.8
IPR011115SecA DEAD-like, N-terminalPFAMPF07517SecA_DEADcoord: 83..179
e-value: 2.2E-24
score: 86.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 52..179
e-value: 1.3E-28
score: 101.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 81..178
IPR000185Protein translocase subunit SecAPANTHERPTHR30612SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEMcoord: 81..179
IPR014018SecA motor DEADPROSITEPS51196SECA_MOTOR_DEADcoord: 73..197
score: 15.196775

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig864contigH-akashiwo_Contig864:255426..265295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig864.8.1mRNA_H-akashiwo_Contig864.8.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig864 254631..265380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig864.8.1 ID=prot_H-akashiwo_Contig864.8.1|Name=mRNA_H-akashiwo_Contig864.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=198bp
MSRCQGHLLLFFALLAIASYVALAFKSTGGAPRRIAHRSNSIYSDITQSG
MLASRRSRAMIQMGLFDSVKKSADGSSVQENISNAKLIDKYNARVEKINS
LEAEIEALSDDALKERAAALRARVAGGAALDAVTEEAFALVREAAWRVLE
LRHYDVQLMGGLALAEEGRLAEMARGRGQGGWWPRCPCSCTLARAGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011115SecA_DEAD
IPR027417P-loop_NTPase
IPR000185SecA
IPR014018SecA_motor_DEAD