prot_H-akashiwo_Contig861.6.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig861.6.1
Unique Nameprot_H-akashiwo_Contig861.6.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length90
Homology
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: A0A6V1P7M0_HETAK (Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7M0_HETAK)

HSP 1 Score: 162 bits (409), Expect = 1.680e-49
Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0
Query:    1 MAGKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            MAGKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAV+
Sbjct:   27 MAGKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVR 111          
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: A0A7S3UYM8_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM8_HETAK)

HSP 1 Score: 148 bits (374), Expect = 5.650e-44
Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 0
Query:    2 AGKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            A   GRGKKSQ++SSKAGLQFPVGRIGRYLK GRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRI+PRHLQLAV+
Sbjct:   34 AAAGGRGKKSQSKSSKAGLQFPVGRIGRYLKNGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIIPRHLQLAVR 117          
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.100e-40
Identity = 68/83 (81.93%), Postives = 79/83 (95.18%), Query Frame = 0
Query:    3 GKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            GK GRGKKS TRS+KAGLQFPVGR+GR+LK+G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI+PRH+QLAV+
Sbjct:    5 GKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVR 87          
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: A0A7S2GRL8_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRL8_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.110e-40
Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    3 GKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            GK GRGKKS T S+KAGLQFPVGRIGRYLKQG+++ R+GAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RI PRH+ LAVK
Sbjct:    5 GKGGRGKKSTTSSAKAGLQFPVGRIGRYLKQGKFATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIAPRHITLAVK 87          
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: A0A7S0S3G4_9CHLO (Histone H2A n=2 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S3G4_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 2.530e-40
Identity = 67/82 (81.71%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    4 KAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            K G GKK+Q+RS+KAGLQFPVGRI RYLK+G+Y+ R+GAGAPVYLAAVLEYLCAE+LELAGNAARDNKKTRIVPRH+QLA++
Sbjct:   16 KGGSGKKAQSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLCAEVLELAGNAARDNKKTRIVPRHIQLAIR 97          
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 5.550e-40
Identity = 68/83 (81.93%), Postives = 79/83 (95.18%), Query Frame = 0
Query:    3 GKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            GK GRGKKS TRS+KAGLQFPVGR+GR+LK+G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI+PRH+QLAV+
Sbjct:   50 GKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVR 132          
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.980e-40
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 0
Query:    3 GKAGRG-KKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            GK GRG KKS T S+KAGLQFPVGRIGRYL+QG+Y+ R+GAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RIVPRH+ LAVK
Sbjct:    5 GKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVK 88          
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.980e-40
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 0
Query:    3 GKAGRG-KKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            GK GRG KKS T S+KAGLQFPVGRIGRYL+QG+Y+ R+GAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RIVPRH+ LAVK
Sbjct:    5 GKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVK 88          
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: B7FWQ2_PHATC (Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FWQ2_PHATC)

HSP 1 Score: 136 bits (343), Expect = 1.010e-39
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 0
Query:    3 GKAGRG-KKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            GK GRG KKS T S+KAGLQFPVGRIGRYL+QG+Y+ R+GAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RIVPRH+ LAVK
Sbjct:    7 GKGGRGDKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVK 90          
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.330e-39
Identity = 68/83 (81.93%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    3 GKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVK 85
            GK GRGKKS ++SSKAGLQFPV RIGRYLK+G+Y+ RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI+PRH+QLAV+
Sbjct:    5 GKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVR 87          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig861.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P7M0_HETAK1.680e-4998.82Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=282... [more]
A0A7S3UYM8_HETAK5.650e-4490.48Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=282... [more]
D7FWI9_ECTSI1.100e-4081.93Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A7S2GRL8_9STRA1.110e-4084.34Histone H2A n=1 Tax=Helicotheca tamesis TaxID=3740... [more]
A0A7S0S3G4_9CHLO2.530e-4081.71Histone H2A n=2 Tax=Chlamydomonas leiostraca TaxID... [more]
D7G193_ECTSI5.550e-4081.93Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A448ZH28_9STRA8.980e-4084.52Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6U2JFS4_9STRA8.980e-4084.52Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
B7FWQ2_PHATC1.010e-3984.52Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A6H5KG79_9PHAE1.330e-3981.93Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 68..82
score: 82.16
coord: 39..54
score: 90.36
coord: 54..67
score: 87.07
coord: 10..32
score: 69.65
IPR002119Histone H2ASMARTSM00414h2a4coord: 1..89
e-value: 8.6E-37
score: 138.2
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 5..86
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 9..85
e-value: 1.9E-15
score: 57.4
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..88
e-value: 3.8E-43
score: 148.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 6..84
NoneNo IPR availablePANTHERPTHR23430:SF257HISTONE H2Acoord: 5..86
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 18..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig861contigH-akashiwo_Contig861:104120..104389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig861.6.1mRNA_H-akashiwo_Contig861.6.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig861 104040..104389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig861.6.1 ID=prot_H-akashiwo_Contig861.6.1|Name=mRNA_H-akashiwo_Contig861.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=90bp
MAGKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAA
VLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVKTTRS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032458Histone_H2A_CS