prot_H-akashiwo_Contig861.13.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig861.13.1
Unique Nameprot_H-akashiwo_Contig861.13.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length170
Homology
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: A0A7S3Y5S7_HETAK (DNA-directed RNA polymerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5S7_HETAK)

HSP 1 Score: 282 bits (721), Expect = 4.060e-92
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query:    1 MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLR 138
            MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLR
Sbjct:  225 MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLR 362          
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: A0A7S3Y5S2_HETAK (DNA-directed RNA polymerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5S2_HETAK)

HSP 1 Score: 202 bits (514), Expect = 5.820e-64
Identity = 101/106 (95.28%), Postives = 102/106 (96.23%), Query Frame = 0
Query:   33 PYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLR 138
            P  +  RYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLR
Sbjct:   21 PRGRARRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLR 126          
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: A0A7S2Y0I2_9STRA (DNA-directed RNA polymerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0I2_9STRA)

HSP 1 Score: 175 bits (443), Expect = 4.100e-53
Identity = 84/119 (70.59%), Postives = 98/119 (82.35%), Query Frame = 0
Query:   19 PVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSL 137
            P++WVTP+GLPVVQPYRK+  +VVQTLVQ + L R +D LPV+  RQRSAFPPNFVHSLDSTHM+MTA++M    L FAAVHDSYWTHAADV  MN++LRE F  LY QPVLE L+DSL
Sbjct:   11 PMSWVTPMGLPVVQPYRKHNLHVVQTLVQKVMLYREEDNLPVSPIRQRSAFPPNFVHSLDSTHMLMTAIEMRRRNLAFAAVHDSYWTHAADVHKMNQVLRECFCNLYTQPVLESLHDSL 129          
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: A0A2R6RFX5_ACTCC (DNA-directed RNA polymerase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RFX5_ACTCC)

HSP 1 Score: 174 bits (442), Expect = 3.840e-52
Identity = 85/138 (61.59%), Postives = 106/138 (76.81%), Query Frame = 0
Query:    1 MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLR 138
            M+WL DCA ++A      PV W+TP+GLPVVQPYRK  RY+++T +Q L L R  D + V  +RQR+AFPPNFVHSLD +HMMMTAV   EAGL+FA VHDSYWTHA DVD MNR+LRE FV+LY++P+LE L +S +
Sbjct:   58 MNWLGDCAKVIALEN--EPVRWITPIGLPVVQPYRKLGRYMIKTSLQVLTLQRETDKVMV--KRQRTAFPPNFVHSLDGSHMMMTAVACKEAGLNFAGVHDSYWTHACDVDKMNRILREKFVKLYEEPILENLLESFQ 191          
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: UPI001F5F97F0 (DNA-directed RNA polymerase 1A n=1 Tax=Vigna umbellata TaxID=87088 RepID=UPI001F5F97F0)

HSP 1 Score: 172 bits (437), Expect = 5.020e-51
Identity = 89/152 (58.55%), Postives = 107/152 (70.39%), Query Frame = 0
Query:    1 MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLRSGTRAWRSPVPPGR 152
            M+WL DCA ++A      PV W TPLGLPVVQPYRK   ++++T +Q L L R  D + V  +RQR+AFPPNFVHSLD +HMMMTAV   + GL+FA VHDSYWTHA DVD MNRLLRE FVELY+ PVLE L +S +S   +   P  P R
Sbjct:   86 MNWLGDCAKIIASEN--QPVRWSTPLGLPVVQPYRKLGSHIIKTSLQMLSLQRETDKVMV--RRQRTAFPPNFVHSLDGSHMMMTAVACKKEGLNFAGVHDSYWTHACDVDKMNRLLREKFVELYENPVLENLLESFQSSFPSLTFPPLPER 233          
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: A0A2G9H5N5_9LAMI (DNA-directed RNA polymerase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H5N5_9LAMI)

HSP 1 Score: 171 bits (434), Expect = 1.690e-50
Identity = 87/152 (57.24%), Postives = 105/152 (69.08%), Query Frame = 0
Query:    1 MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLRSGTRAWRSPVPPGR 152
            M WL DCA ++A      PV W TPLGLPVVQPYRK  R++++T +Q L L R  D   V  +RQR+AFPPNFVHSLD +HMMMTA+   EAGL+FA VHDSYWTHA DVD MN++LRE FVELY+ PVLE L +  +      + P  P R
Sbjct:   92 MSWLGDCAKIIANEN--QPVHWTTPLGLPVVQPYRKLGRHMIKTSLQVLTLKRETDK--VMTKRQRTAFPPNFVHSLDGSHMMMTAIACSEAGLNFAGVHDSYWTHACDVDKMNKILREKFVELYEAPVLENLLEGFQKSFPNLKFPPLPER 239          
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: A0A3P5Y7L0_BRACM (DNA-directed RNA polymerase n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A3P5Y7L0_BRACM)

HSP 1 Score: 171 bits (433), Expect = 2.390e-50
Identity = 84/138 (60.87%), Postives = 102/138 (73.91%), Query Frame = 0
Query:    1 MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLR 138
            M WL DCA ++A      PV W TPLGLPVVQPY ++ R++++T +Q L L R  + + V  ++QR+AFPPNFVHSLD THMMMTAV   EAGL+FA VHDSYWTHA DVDTMNR+LRE FVELY  P+LE L  S +
Sbjct:   92 MSWLGDCAKIIASDN--HPVRWTTPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDV--RKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQ 225          
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: A0A7N0RC54_KALFE (DNA-directed RNA polymerase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RC54_KALFE)

HSP 1 Score: 170 bits (430), Expect = 2.520e-50
Identity = 87/152 (57.24%), Postives = 103/152 (67.76%), Query Frame = 0
Query:    1 MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLRSGTRAWRSPVPPGR 152
            M WL DCA ++A      PV+WVTPLGLPVVQPYRK  R++++T +Q L L R  D + V  +RQR+AFPPNFVHSLD  HMMMTAV    AGL FA VHDSYWTHA DV+ MNR+LRE FVELY+ P+LE L           + P  P R
Sbjct:   58 MSWLGDCAKIIASEN--QPVSWVTPLGLPVVQPYRKLGRHLIKTSLQMLTLQRETDKVMV--RRQRTAFPPNFVHSLDGCHMMMTAVACKHAGLSFAGVHDSYWTHACDVEEMNRILREKFVELYETPILENLLQGFEEAFPKLQFPPLPDR 205          
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: A0A2G9GM68_9LAMI (DNA-directed RNA polymerase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GM68_9LAMI)

HSP 1 Score: 171 bits (432), Expect = 3.390e-50
Identity = 85/152 (55.92%), Postives = 106/152 (69.74%), Query Frame = 0
Query:    1 MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLRSGTRAWRSPVPPGR 152
            M+WL DCA ++A      PV W TPLGLPVVQPYRK  R++++T +Q L L    D + V  +RQR+AFPPNFVHSLD +HMMMTA+   +AGL+FA VHDSYWTHA DVD MNR+LRE FVELY+ P+LE L +  +    +   P  P R
Sbjct:   92 MNWLGDCAKIIASEN--EPVCWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHETDKVMV--KRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLEGFQQSFPSLSFPPLPAR 239          
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Match: A0A7N1A728_KALFE (DNA-directed RNA polymerase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A728_KALFE)

HSP 1 Score: 167 bits (422), Expect = 7.160e-50
Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = 0
Query:    1 MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVHDSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLRSGTRAWRSPVPPGR 152
            M WL +CA ++A      PV W +PLGLPV+QPY K+ R++++T +Q L L R  D++ +  ++QR+AFPPNFVHSLD +HMMMTA+   +A L FA VHDSYWTHA DVDTMNR+LRE FVELY+ P+LE L +S +        P  P R
Sbjct:    1 MSWLGECAKIIASEN--EPVRWTSPLGLPVLQPYCKSERHIIKTSLQVLALQREGDSVQI--RKQRTAFPPNFVHSLDGSHMMMTAIACRDANLRFAGVHDSYWTHACDVDTMNRILREKFVELYELPILENLLESFQKAYPTVTFPPLPAR 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig861.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y5S7_HETAK4.060e-92100.00DNA-directed RNA polymerase n=1 Tax=Heterosigma ak... [more]
A0A7S3Y5S2_HETAK5.820e-6495.28DNA-directed RNA polymerase n=1 Tax=Heterosigma ak... [more]
A0A7S2Y0I2_9STRA4.100e-5370.59DNA-directed RNA polymerase n=1 Tax=Fibrocapsa jap... [more]
A0A2R6RFX5_ACTCC3.840e-5261.59DNA-directed RNA polymerase n=1 Tax=Actinidia chin... [more]
UPI001F5F97F05.020e-5158.55DNA-directed RNA polymerase 1A n=1 Tax=Vigna umbel... [more]
A0A2G9H5N5_9LAMI1.690e-5057.24DNA-directed RNA polymerase n=1 Tax=Handroanthus i... [more]
A0A3P5Y7L0_BRACM2.390e-5060.87DNA-directed RNA polymerase n=1 Tax=Brassica campe... [more]
A0A7N0RC54_KALFE2.520e-5057.24DNA-directed RNA polymerase n=1 Tax=Kalanchoe fedt... [more]
A0A2G9GM68_9LAMI3.390e-5055.92DNA-directed RNA polymerase n=1 Tax=Handroanthus i... [more]
A0A7N1A728_KALFE7.160e-5053.29DNA-directed RNA polymerase n=1 Tax=Kalanchoe fedt... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002092DNA-directed RNA polymerase, phage-typePFAMPF00940RNA_polcoord: 1..139
e-value: 2.8E-56
score: 191.2
IPR002092DNA-directed RNA polymerase, phage-typePANTHERPTHR10102DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 1..138
NoneNo IPR availableGENE3D3.30.70.370coord: 54..150
e-value: 8.0E-28
score: 99.4
NoneNo IPR availablePANTHERPTHR10102:SF0DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 1..138
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig861contigH-akashiwo_Contig861:190431..207761 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig861.13.1mRNA_H-akashiwo_Contig861.13.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig861 190431..207761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig861.13.1 ID=prot_H-akashiwo_Contig861.13.1|Name=mRNA_H-akashiwo_Contig861.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=170bp
MDWLADCAALVAGTGCGAPVAWVTPLGLPVVQPYRKNTRYVVQTLVQYLQ
LARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMTAVKMHEAGLDFAAVH
DSYWTHAADVDTMNRLLRESFVELYQQPVLERLYDSLRSGTRAWRSPVPP
GRWTWRPCWTAPTSLPEGAA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002092DNA-dir_Rpol_phage-type
IPR043502DNA/RNA_pol_sf