prot_H-akashiwo_Contig842.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig842.5.1
Unique Nameprot_H-akashiwo_Contig842.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length261
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig842.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 80..106
e-value: 13.0
score: 12.1
coord: 112..138
e-value: 7.5
score: 14.4
coord: 144..168
e-value: 0.32
score: 20.1
coord: 52..72
e-value: 280.0
score: 0.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 146..168
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 114..138
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 82..106
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 78..166
e-value: 7.8E-8
score: 34.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig842contigH-akashiwo_Contig842:87415..99707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig842.5.1mRNA_H-akashiwo_Contig842.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig842 87415..99707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig842.5.1 ID=prot_H-akashiwo_Contig842.5.1|Name=mRNA_H-akashiwo_Contig842.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=261bp
GRLRAGTAGDVELAQSLLPGGRTPQRGAKHGRMMGKLGAIAEDALGGGGG
PATCPNCHKTYLTENALMGHTGGAAPGTLFPCAEPGCGQRCCSRYELSAH
KWDAKHGFPEPVSCPTPGCGALFASTERLRAHWDGEEHAPPRGVRCPHCP
MAFCSLAALRQHAKLWGHFPSDHVFVDRPNPFAAPPPPPGQPPRPPLEAR
HEFENPFFASEDVFESCRSPHETIEVEVTGDPGRVRAWLLEHVLYQQGAR
RAVGLDVEWKP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type