prot_H-akashiwo_Contig842.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig842.3.1
Unique Nameprot_H-akashiwo_Contig842.3.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length130
Homology
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BLAST of mRNA_H-akashiwo_Contig842.3.1 vs. uniprot
Match: A0A7S3UY10_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY10_HETAK)

HSP 1 Score: 238 bits (608), Expect = 3.360e-79
Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0 
Query:    1 MVNIVFGSHNTEEMDNPTQSPQ-LPENGDAIRDKEEASSVTSSTKGEEGGGGEPCPTCGQTFAKRGDLTKHRKMKGHAVFPCPDRAGCRRMFFSEAALRDHLRMTAHEAAEDGAGHLPADLLEEQ 124
            MVNIVFGSHNTEEMDNP QSPQ LPENGDAIRDKEEASSVTSSTKGEEGGG EPCPTCGQTFAKRGDLTKHRKMKGHAVFPCPDRAGCRRMFFSEAALRDHLRMTAHEAAEDGAGHLPADLLEEQ
Sbjct:    1 MVNIVFGSHNTEEMDNPIQSPQQLPENGDAIRDKEEASSVTSSTKGEEGGG-EPCPTCGQTFAKRGDLTKHRKMKGHAVFPCPDRAGCRRMFFSEAALRDHLRMTAHEAAEDGAGHLPADLLEEQ 124
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig842.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3UY10_HETAK3.360e-7997.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 79..106
e-value: 8.5
score: 13.9
coord: 52..76
e-value: 1.0
score: 18.4
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 53..76
e-value: 4.6E-4
score: 20.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 54..76
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 52..77
score: 9.681084
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 79..111
score: 9.452469
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 26..108
e-value: 1.5E-9
score: 39.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig842contigH-akashiwo_Contig842:72048..86012 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig842.3.1mRNA_H-akashiwo_Contig842.3.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig842 71756..86012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig842.3.1 ID=prot_H-akashiwo_Contig842.3.1|Name=mRNA_H-akashiwo_Contig842.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=130bp
MVNIVFGSHNTEEMDNPTQSPQLPENGDAIRDKEEASSVTSSTKGEEGGG
GEPCPTCGQTFAKRGDLTKHRKMKGHAVFPCPDRAGCRRMFFSEAALRDH
LRMTAHEAAEDGAGHLPADLLEEQQEQEEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type