prot_H-akashiwo_Contig833.8.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig833.8.1
Unique Nameprot_H-akashiwo_Contig833.8.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length209
Homology
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: A0A7S4DC05_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC05_HETAK)

HSP 1 Score: 355 bits (911), Expect = 1.940e-123
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query:    1 MKTQGALAFAFAATAAAFQTGSKAPVNNVLNMAEEGAAAPAPMEMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSE 178
            MKTQGALAFAFAATAAAFQTGSKAPVNNVLNMAEEGAAAPAPMEMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSE
Sbjct:    1 MKTQGALAFAFAATAAAFQTGSKAPVNNVLNMAEEGAAAPAPMEMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSE 178          
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: A0A6V1U3D5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U3D5_HETAK)

HSP 1 Score: 336 bits (861), Expect = 4.960e-116
Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0
Query:   45 MSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSEEMQLKELENGRLAMCAIGGLVHHFLLFGHN 208
            MSKSMPFLAAPKNTAGMIGDKGFDPFGFSD FDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPI+ALSMVGPQPLAQIFLFCGFLEFT NKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSEEMQLKELENGRLAMCAIGGLVHHFLLFGHN
Sbjct:    1 MSKSMPFLAAPKNTAGMIGDKGFDPFGFSDDFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIDALSMVGPQPLAQIFLFCGFLEFTMNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSEEMQLKELENGRLAMCAIGGLVHHFLLFGHN 164          
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: A0A7S4DBU8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBU8_HETAK)

HSP 1 Score: 211 bits (536), Expect = 2.980e-67
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0
Query:    1 MKTQGALAFAFAATAAAFQTGSKAPVNNVLNMAEEGAAAPAPMEMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTN 116
            MKTQGALAFAFAATAAAFQTGSKAPVNNVL MAE G AAPAP+EMSKSMPFLAAPKNTAGMIGDKGFDPFGFSD FDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTN
Sbjct:    1 MKTQGALAFAFAATAAAFQTGSKAPVNNVLKMAE-GDAAPAPVEMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDDFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTN 115          
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: D8LCR7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCR7_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 4.660e-64
Identity = 117/212 (55.19%), Postives = 145/212 (68.40%), Query Frame = 0
Query:    8 AFAFAATAAAFQTGSKAPV-NNVLNMAEEGAA----------APAPMEMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGK--GGPSEEMQLKELENGRLAMCAIGGLVHHFLLFG 206
            A AF A ++  +  S +P  +  L MAEE AA           PA   MS S+PFL  PKN  GM+GD GFDPFGF+  F +K+MREAELKHGRV+MLAVVG+LVS+ VH+PG AY S NP++A++ VGP P+ QIFLFCGFLE+  + GKMTM +M ED   +PG  GFDPM L K      E+ QL+E++NGRLAM AIGGL+H  LL G
Sbjct:   17 ASAFVAPSSFSRVISSSPAASKALRMAEEVAAEPEAAVEPEPVPAGPAMSASIPFLEQPKNLEGMVGDIGFDPFGFATIFPVKFMREAELKHGRVAMLAVVGWLVSEVVHVPGAAYMSENPVDAMAAVGPGPMLQIFLFCGFLEWKFHNGKMTMDNMHEDGN-EPGDFGFDPMMLAKKPADVREKYQLQEIKNGRLAMSAIGGLIHQSLLLG 227          
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: W7TJ16_9STRA (Light-harvesting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ16_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.110e-63
Identity = 100/164 (60.98%), Postives = 123/164 (75.00%), Query Frame = 0
Query:   46 SKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPS--EEMQLKELENGRLAMCAIGGLVHHFLLFGH 207
            SKS+PFL  PKN  GM+GD GFDP G ++  DI+W+REAELK+GRV+MLA +GF+V + + LPG  Y   N ++A   VGPQPL QIFLFCGFLEFT +KGKMT +DMF D +R+PG  GFDP+  GK  PS  E + L EL+NGRLAM AIGGL+HH L+ GH
Sbjct:  128 SKSVPFLLKPKNLDGMVGDVGFDPLGLAEYVDIRWLREAELKNGRVAMLAFLGFVVQEFIRLPGDLYSEPNGVKAFFQVGPQPLIQIFLFCGFLEFTLHKGKMTQMDMFADGKREPGNFGFDPLGFGKD-PSKRERLALAELKNGRLAMIAIGGLIHHALVTGH 290          
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: A0A835Z4D2_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D2_9STRA)

HSP 1 Score: 189 bits (480), Expect = 5.360e-58
Identity = 90/166 (54.22%), Postives = 124/166 (74.70%), Query Frame = 0
Query:   45 MSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSE--EMQLKELENGRLAMCAIGGLVHHFLLFGHN 208
            MSKS+PFL  PK   G +G+  FDPF  S+   + ++RE+ELKHGR++MLAVVGF+VS+ +H+PG AYQ++NP++A++MVG QP+ QIF FCGFLE   +KGKMTM+DM  D +  PG  GFDP+N+ K  P++  + QL E++NGRLAM AI GL+H  ++ GH 
Sbjct:    1 MSKSLPFLVKPKQLDGWVGNAEFDPFSLSELLPMAFVRESELKHGRIAMLAVVGFVVSELIHIPGEAYQASNPVDAVNMVGAQPMLQIFAFCGFLESVFHKGKMTMMDMHADGQT-PGDFGFDPLNVSKD-PAKLAQYQLSEIKNGRLAMMAISGLIHQSIITGHG 164          
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: A0A1Z5JQG8_FISSO (Light-harvesting complex I chlorophyll a/b binding protein 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQG8_FISSO)

HSP 1 Score: 187 bits (475), Expect = 8.220e-57
Identity = 99/196 (50.51%), Postives = 129/196 (65.82%), Query Frame = 0
Query:   14 TAAAFQTGSKAPVNNVLNMAEEGAAAPAPMEMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSE---EMQLKELENGRLAMCAIGGLVHHFLLFG 206
            +AAAF    K+   + LN            EMSKS+PFL APKNTAG +GD GFDP GFSD FD+KW+RE+E+KH R +MLA +GF+V Q V LPG      + + A + VGP P+ QIF   G LEF  N GK+T+ +MF D  R PG  GFDP+ + KG  +E   +M+LKE++NGRLAMCAIGG++ H ++ G
Sbjct:   12 SAAAFAPAQKSAKTSALNA-----------EMSKSIPFLTAPKNTAGWVGDVGFDPLGFSDYFDMKWLRESEIKHSRAAMLASLGFMVQQFVTLPGMP-DVDDSMLAPAAVGPSPMLQIFFGLGVLEFWSNNGKVTIENMFSDSSRVPGNFGFDPLGMAKGKSAEAMADMELKEIKNGRLAMCAIGGMMAHNIVTG 195          
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: A0A7S1D5D0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5D0_CYCTE)

HSP 1 Score: 186 bits (473), Expect = 1.700e-56
Identity = 96/162 (59.26%), Postives = 118/162 (72.84%), Query Frame = 0
Query:   44 EMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVH-LPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSEEMQL---KELENGRLAMCAIGGLVHH 201
            EMSKS+PFL APKN  G +GD GFDP GFSD FD+KW+REAELKHGRVSMLA +GF+  Q +  +PG  +   + + A S+VG   + QI  + G LEF  NKGK+TMLDMFED +R PG LGFDP+ L  G   EEM+L   KE++NGRLAM AIGG++HH
Sbjct:   31 EMSKSVPFLEAPKNLEGYVGDVGFDPLGFSDYFDMKWLREAELKHGRVSMLATLGFVAQQFLPAIPGYVHVDDSNL-APSVVGLSAMLQIVFYVGILEFWTNKGKVTMLDMFEDGDRVPGDLGFDPLGLAVGKSDEEMELMQYKEIKNGRLAMLAIGGMIHH 191          
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: B7FUM6_PHATC (Protein fucoxanthin chlorophyll a/c protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUM6_PHATC)

HSP 1 Score: 186 bits (471), Expect = 3.420e-56
Identity = 93/161 (57.76%), Postives = 113/161 (70.19%), Query Frame = 0
Query:   44 EMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSEE---MQLKELENGRLAMCAIGGLVHH 201
            EMSKSMPFL APKNT G +GD GFDP GFSD FD+KW+RE+E+KHGR +MLA VGF++ Q   LPG  +   + + A    G  P+ QI    G LE+  NKGK+TM DMF D  R+PG LGFDPM + K    EE   MQLKE++NGRLAM AIGG++HH
Sbjct:   32 EMSKSMPFLTAPKNTGGYVGDVGFDPLGFSDNFDMKWLRESEIKHGRAAMLATVGFVMQQFWTLPGMVHVDDSNL-APGAAGISPMLQIVFGMGALEWWTNKGKVTMEDMFSDSSREPGNLGFDPMGMSKNKSKEEAEAMQLKEIKNGRLAMLAIGGMIHH 191          
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Match: A0A6U3X5N1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X5N1_9STRA)

HSP 1 Score: 186 bits (471), Expect = 3.760e-56
Identity = 94/161 (58.39%), Postives = 114/161 (70.81%), Query Frame = 0
Query:   44 EMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPSEE---MQLKELENGRLAMCAIGGLVHH 201
            EMSKS+PF+ APKNTAG +GD GFDP GFSD FD+KW+REAE+KHGR SMLA +GF+V Q V +PG  +   + +   S VG   + QI L+ G LEF  NKG +TM  MF D ER PG LGFDPM L  G   EE   + L+EL+NGRLAM AIGG++HH
Sbjct:   35 EMSKSLPFIMAPKNTAGWVGDVGFDPMGFSDNFDMKWLREAEIKHGRSSMLATLGFVVQQFVTIPGYTHVDDSNLAPTS-VGASAMLQIVLWMGVLEFWSNKGNVTMETMFSDPERVPGDLGFDPMGLSVGKSQEEKDKLALQELKNGRLAMLAIGGMIHH 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig833.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DC05_HETAK1.940e-123100.00Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A6V1U3D5_HETAK4.960e-11698.17Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S4DBU8_HETAK2.980e-6795.69Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
D8LCR7_ECTSI4.660e-6455.19Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
W7TJ16_9STRA2.110e-6360.98Light-harvesting protein n=1 Tax=Nannochloropsis g... [more]
A0A835Z4D2_9STRA5.360e-5854.22Chlorophyll a/b-binding protein domain-containing ... [more]
A0A1Z5JQG8_FISSO8.220e-5750.51Light-harvesting complex I chlorophyll a/b binding... [more]
A0A7S1D5D0_CYCTE1.700e-5659.26Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B7FUM6_PHATC3.420e-5657.76Protein fucoxanthin chlorophyll a/c protein n=3 Ta... [more]
A0A6U3X5N1_9STRA3.760e-5658.39Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 43..208
e-value: 1.3E-36
score: 128.3
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 11..203
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 40..206
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 55..201
e-value: 9.1E-38
score: 130.3
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 11..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig833contigH-akashiwo_Contig833:377493..378119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig833.8.1mRNA_H-akashiwo_Contig833.8.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig833 377493..378119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig833.8.1 ID=prot_H-akashiwo_Contig833.8.1|Name=mRNA_H-akashiwo_Contig833.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=209bp
MKTQGALAFAFAATAAAFQTGSKAPVNNVLNMAEEGAAAPAPMEMSKSMP
FLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFL
VSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTM
LDMFEDKERKPGFLGFDPMNLGKGGPSEEMQLKELENGRLAMCAIGGLVH
HFLLFGHN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln