prot_H-akashiwo_Contig832.8.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig832.8.1
Unique Nameprot_H-akashiwo_Contig832.8.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length53
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig832.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 14..53
e-value: 7.4E-11
score: 43.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 25..52
e-value: 1.5E-9
score: 37.9
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 19..53
score: 14.771825
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 19..53
score: 7.444956
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 23..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig832contigH-akashiwo_Contig832:307833..309045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig832.8.1mRNA_H-akashiwo_Contig832.8.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig832 307831..309045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig832.8.1 ID=prot_H-akashiwo_Contig832.8.1|Name=mRNA_H-akashiwo_Contig832.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=53bp
PNSPVKTRAGRQTVTPSKRQRASIGKWTQEEDQILAEQVQKYGAKNWREI
SHA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR001005SANT/Myb
IPR009057Homeobox-like_sf