prot_H-akashiwo_Contig832.6.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig832.6.1
Unique Nameprot_H-akashiwo_Contig832.6.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length260
Homology
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: A0A7S3XMC0_HETAK (DNA repair protein RAD51 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMC0_HETAK)

HSP 1 Score: 511 bits (1316), Expect = 1.140e-181
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
Query:    1 MMTNFMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 259
            MMTNFMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD
Sbjct:   86 MMTNFMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 344          
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: W7TKJ9_9STRA (DNA repair protein RAD51 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKJ9_9STRA)

HSP 1 Score: 401 bits (1030), Expect = 1.120e-137
Identity = 197/255 (77.25%), Postives = 227/255 (89.02%), Query Frame = 0
Query:    5 FMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 259
            F+TA Q LE R D+++LSTGS +LD +L GG+ETGS+TEIFGEFRTGKTQLCHTLCVT QLP+ +  GG EGKAMYIDTEG+FRP+ +V +AERFGL+ D VLDN+A ARAHNSEQQM+LLK ASAMM+EDR+AL++VDSATALFRTDYCGRGELSERQMQLAQFLRQL RM++EFG+A+V+TNQVVA+P GMSFAKD TKPIGGNIIAHAS TRLRLRK RGENRIC IYDSP+LPE E QFSIG  GI++AKD
Sbjct:  123 FLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQ--GGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375          
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: D7G4Q1_ECTSI (DNA repair protein RAD51 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4Q1_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 3.040e-137
Identity = 193/255 (75.69%), Postives = 226/255 (88.63%), Query Frame = 0
Query:    5 FMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 259
            F TA Q L  R D++ L+TGS ELD +L GGIETGS+TE+FGEFRTGKTQLCHTLCV CQ+P+    GG EGKAMYIDTEG+FRP+ +  +AERFGLN D+VL+N+A ARAHNSEQQM+LLK ASAMMAEDR+ALL++DSATAL+RTDYCGRGELSERQMQLAQFLRQL RMA+EFG+A+V+TNQVVA+P GMSFAKDSTKPIGGNIIAHASTTRLRLRKARG+NRIC ++DSP+L E+ECQFSIG  G+++ KD
Sbjct:   91 FTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQMPLD--AGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 343          
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: A0A7S1UHL6_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHL6_9STRA)

HSP 1 Score: 391 bits (1004), Expect = 1.960e-133
Identity = 189/255 (74.12%), Postives = 224/255 (87.84%), Query Frame = 0
Query:    5 FMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 259
            F++A Q L  RAD++ LSTGS ELD +L GGIETGS+TE+FGEFRTGKTQLCHTLCVTCQLP+ +  GG EG+A+YIDTEG+FRP+ +  +AERFGLNAD+VLDN+A ARA NSEQQ ELL+ +SAMMAEDR+ALL+VDSATALFRTDY GRGELSERQM +AQFLRQL RMA+EFG+A+V TNQVVA+P GMSFAKD+TKPIGGNIIAHASTTRLR RK RGENRIC ++DSP+LPE +CQFS+G  G+++ KD
Sbjct:  143 FISATQHLAQRADVISLSTGSRELDQLLQGGIETGSLTEVFGEFRTGKTQLCHTLCVTCQLPLDQ--GGGEGRALYIDTEGTFRPDKLSAIAERFGLNADDVLDNVAYARAQNSEQQTELLRMSSAMMAEDRYALLVVDSATALFRTDYTGRGELSERQMAMAQFLRQLTRMAEEFGVAVVYTNQVVANPDGMSFAKDATKPIGGNIIAHASTTRLRFRKGRGENRICQVFDSPTLPEADCQFSVGPAGVEDPKD 395          
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: A0A7S2FUQ7_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FUQ7_9STRA)

HSP 1 Score: 384 bits (985), Expect = 3.640e-131
Identity = 187/255 (73.33%), Postives = 222/255 (87.06%), Query Frame = 0
Query:    5 FMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 259
            F TA Q L+ R +I+ +STGSS LD +L GGIETGS+TEIFGEFRTGKTQLCHTLCVTCQLP+ +  GG EGKAMYIDTEG FRP  +V +AER+G++ + VLDN+  ARAHNSEQQMELLK A+A+M+EDRF LLIVDSATALFRTDY GRGELSERQ QL QFLRQLQR+A EFG+A+V++NQVVA+P GMSFAKD++KPIGGNIIAHAS TRL+LRK+RGENRIC +YDSPS+PE+EC F++G  GI++AKD
Sbjct:  100 FQTAAQELQRREEIIMISTGSSALDELLQGGIETGSLTEIFGEFRTGKTQLCHTLCVTCQLPLDQ--GGGEGKAMYIDTEGCFRPNRLVAIAERYGVSPEGVLDNVVFARAHNSEQQMELLKQAAALMSEDRFVLLIVDSATALFRTDYVGRGELSERQAQLGQFLRQLQRLASEFGLAVVLSNQVVANPDGMSFAKDASKPIGGNIIAHASHTRLKLRKSRGENRICQVYDSPSIPESECTFALGNTGIEDAKD 352          
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: A0A448ZI14_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI14_9STRA)

HSP 1 Score: 381 bits (979), Expect = 2.260e-130
Identity = 187/255 (73.33%), Postives = 221/255 (86.67%), Query Frame = 0
Query:    5 FMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 259
            F TA  ALE R  I  L+TG+ E+D +L GGIETGS+TE+FGEFRTGKTQLCHTLCVTCQ+PV++  GGAEGKA+YIDTEGSFRPE +  +AERFGL+   VL+N+ACARAHNSE QMELLK A+A+M++DR+ALL+VDSATALFRTDY GRGELSERQMQ+ QFLRQL R+A+EFG+A+ ITNQVVA+P GMSFAKD+TKPIGGNIIAHASTTRLRLRK RGENRI S+YDSPSLPE +CQF++   G+ +A D
Sbjct:   93 FKTAADALEDRQTIAMLTTGAVEIDKLLEGGIETGSITEVFGEFRTGKTQLCHTLCVTCQMPVSD--GGAEGKAIYIDTEGSFRPERLRAIAERFGLDPAVVLENVACARAHNSEHQMELLKVAAAIMSQDRYALLVVDSATALFRTDYTGRGELSERQMQMGQFLRQLTRLAEEFGVAVFITNQVVANPDGMSFAKDATKPIGGNIIAHASTTRLRLRKGRGENRIMSVYDSPSLPEADCQFALSNAGVCDATD 345          
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: A0A836CHV0_9STRA (DNA repair and recombination protein Rad51A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV0_9STRA)

HSP 1 Score: 380 bits (976), Expect = 1.110e-129
Identity = 191/273 (69.96%), Postives = 227/273 (83.15%), Query Frame = 0
Query:    5 FMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTE------------------IFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 259
            F TA Q L+ R D++ L+TGS ELD +LAGGIETGS+TE                  +FGEFRTGKTQLCHTLCVTCQLP+ ++GGG EGKAMYIDTE +FRP+ +  +A+R+GLNAD+VL+N+A ARAHNSEQQM+LLK ASAMMAEDR+ALL+VDSATALFRTDY GRGELSERQMQLAQFLRQL RMA+EFG+A+VITNQVVA+P GMSFAKD+TKPIGGNI+AHASTTRLRLRK R ENR+C ++DSP+LPE+E QFS+ + GI +  D
Sbjct:   91 FTTANQHLQQRQDLITLTTGSKELDKLLAGGIETGSLTELHRRHLLTHAARTPRAPQVFGEFRTGKTQLCHTLCVTCQLPL-DLGGG-EGKAMYIDTESTFRPQRLAAIAQRYGLNADDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVVDSATALFRTDYSGRGELSERQMQLAQFLRQLTRMAEEFGVAVVITNQVVANPDGMSFAKDATKPIGGNIMAHASTTRLRLRKGRAENRVCQVFDSPTLPESEAQFSLSDSGIQDPTD 361          
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: A0A7S2W0D7_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0D7_9STRA)

HSP 1 Score: 377 bits (969), Expect = 4.950e-129
Identity = 181/254 (71.26%), Postives = 223/254 (87.80%), Query Frame = 0
Query:    4 NFMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNA 257
            +F TA  ALE R  ++ L+TGS+ELD +L GG+ETGS+TEIFGEFRTGKTQLCHTLCVTCQL V +  GGAEGKA+YIDTEG+FRP  + ++A+RFG+N D  L+N+ACARAHNSE Q+ELLK A+A+MA+DR+AL++VDSATALFRTDY GRGELSERQMQLAQFLR L R+A+EFG+A+++TNQVVA+P GMSFAKD+TKPIGGNIIAHASTTRLR RK RG+NRIC++YDSP+LPE + QF++G +GI +A
Sbjct:   80 DFKTAADALEDRKSLVTLTTGSTELDKLLEGGVETGSLTEIFGEFRTGKTQLCHTLCVTCQLSVTD--GGAEGKAIYIDTEGTFRPNRLQEIAKRFGMNPDVALENVACARAHNSEHQIELLKLAAAIMAQDRYALIVVDSATALFRTDYIGRGELSERQMQLAQFLRGLTRLAEEFGVAVLLTNQVVANPDGMSFAKDATKPIGGNIIAHASTTRLRFRKGRGDNRICTVYDSPTLPEADAQFAVGGQGICDA 331          
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: A0A1Z5KQ22_FISSO (DNA repair protein RAD51 homolog n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ22_FISSO)

HSP 1 Score: 372 bits (955), Expect = 9.350e-127
Identity = 179/256 (69.92%), Postives = 220/256 (85.94%), Query Frame = 0
Query:    4 NFMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 259
            +F TA  ALE R  ++ L+TGS ELD +L GGIETGS+TE+FGEFRTGKTQLCHTLC+TCQ+ + +  GGAEGKA+YIDTEG+FRP  +  +AERFGL+    L+N+A ARAHNSE QMELLK A+A+MA+DR+ALL+VDSATAL+RTDY GRGELSERQMQ+AQFLRQL R+A+EFG+A+ ITNQVVA P  MSFAKDSTKPIGGNI+AHASTTRLRLRK RG+NRIC+++DSP+LPE +CQF++G +G+ +A D
Sbjct:   90 DFKTAADALEDRKSLVTLTTGSVELDKLLEGGIETGSITEVFGEFRTGKTQLCHTLCITCQMAITD--GGAEGKAIYIDTEGTFRPARLQAIAERFGLDPAVALENVAYARAHNSEHQMELLKMAAAIMAQDRYALLVVDSATALYRTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVASPDAMSFAKDSTKPIGGNIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADCQFAVGAQGVCDATD 343          
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Match: A0A7S2FVY7_9STRA (DNA repair and recombination protein RadB n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FVY7_9STRA)

HSP 1 Score: 367 bits (942), Expect = 2.390e-126
Identity = 178/236 (75.42%), Postives = 209/236 (88.56%), Query Frame = 0
Query:   24 GSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 259
            GSS LD +L GGIETGS+TEIFGEFRTGKTQLCHTLCVTCQLP+ +  GG EGKAMYIDTEG FRP  +V +AER+G++ + VLDN+  ARAHNSEQQMELLK A+A+M+EDRF LLIVDSATALFRTDY GRGELSERQ QL QFLRQLQR+A EFG+A+V++NQVVA+P GMSFAKD++KPIGGNIIAHAS TRL+LRK+RGENRIC +YDSPS+PE+EC F++G  GI++AKD
Sbjct:    5 GSSALDELLQGGIETGSLTEIFGEFRTGKTQLCHTLCVTCQLPLDQ--GGGEGKAMYIDTEGCFRPNRLVAIAERYGVSPEGVLDNVVFARAHNSEQQMELLKQAAALMSEDRFVLLIVDSATALFRTDYVGRGELSERQAQLGQFLRQLQRLASEFGLAVVLSNQVVANPDGMSFAKDASKPIGGNIIAHASHTRLKLRKSRGENRICQVYDSPSIPESECTFALGNTGIEDAKD 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig832.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XMC0_HETAK1.140e-181100.00DNA repair protein RAD51 homolog n=1 Tax=Heterosig... [more]
W7TKJ9_9STRA1.120e-13777.25DNA repair protein RAD51 homolog n=2 Tax=Monodopsi... [more]
D7G4Q1_ECTSI3.040e-13775.69DNA repair protein RAD51 homolog n=2 Tax=Ectocarpu... [more]
A0A7S1UHL6_9STRA1.960e-13374.12DNA repair protein RAD51 homolog n=1 Tax=Phaeomona... [more]
A0A7S2FUQ7_9STRA3.640e-13173.33DNA repair protein RAD51 homolog n=1 Tax=Dictyocha... [more]
A0A448ZI14_9STRA2.260e-13073.33DNA repair protein RAD51 homolog n=1 Tax=Pseudo-ni... [more]
A0A836CHV0_9STRA1.110e-12969.96DNA repair and recombination protein Rad51A n=1 Ta... [more]
A0A7S2W0D7_9STRA4.950e-12971.26DNA repair protein RAD51 homolog n=1 Tax=Eucampia ... [more]
A0A1Z5KQ22_FISSO9.350e-12769.92DNA repair protein RAD51 homolog n=2 Tax=Fistulife... [more]
A0A7S2FVY7_9STRA2.390e-12675.42DNA repair and recombination protein RadB n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 38..226
e-value: 1.4E-7
score: 41.2
IPR011939DNA repair and recombination protein RadBPIRSFPIRSF003336RadBcoord: 15..258
e-value: 2.6E-44
score: 149.3
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 4..256
e-value: 4.2E-116
score: 386.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..259
e-value: 3.7E-87
score: 294.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..255
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 4..258
IPR020587DNA recombination and repair protein RecA, monomer-monomer interfacePROSITEPS50163RECA_3coord: 196..259
score: 17.500282
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 17..190
score: 49.401875
IPR033925Rad51/DMC1/RadACDDcd01123Rad51_DMC1_radAcoord: 21..254
e-value: 4.1742E-131
score: 368.449

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig832contigH-akashiwo_Contig832:210900..211679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig832.6.1mRNA_H-akashiwo_Contig832.6.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig832 210648..211687 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig832.6.1 ID=prot_H-akashiwo_Contig832.6.1|Name=mRNA_H-akashiwo_Contig832.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=260bp
MMTNFMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRT
GKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFG
LNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFR
TDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFA
KDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIG
EKGIDNAKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR011939DNA_repair_and_recomb_RadB
IPR013632DNA_recomb/repair_Rad51_C
IPR027417P-loop_NTPase
IPR020587RecA_monomer-monomer_interface
IPR020588RecA_ATP-bd
IPR033925Rad51_DMC1_RadA