prot_H-akashiwo_Contig81.28.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig81.28.1
Unique Nameprot_H-akashiwo_Contig81.28.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length108
Homology
BLAST of mRNA_H-akashiwo_Contig81.28.1 vs. uniprot
Match: A0A6V1P0L7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P0L7_HETAK)

HSP 1 Score: 216 bits (551), Expect = 2.270e-71
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 0
Query:    1 MALRRTLAVGGPVRRSFAAMFAAEKNDIQPQLKKWWKGTPQMDGVVTQSLSPFEQQIVQPWIKTIPDKIKKKIVDDFPPTIPALIFVAITLGYCESEKKRLSMEHRD 107
            MALRRTLAVGGPVRRSFAAMFAAE+NDIQPQLKKWWKGTPQMDGVVTQSLSPFEQQIVQPWIKTIPDKIKKKIVDDFPPTIPALIFVAITLGYCESEKKRLSMEHRD
Sbjct:    1 MALRRTLAVGGPVRRSFAAMFAAERNDIQPQLKKWWKGTPQMDGVVTQSLSPFEQQIVQPWIKTIPDKIKKKIVDDFPPTIPALIFVAITLGYCESEKKRLSMEHRD 107          
BLAST of mRNA_H-akashiwo_Contig81.28.1 vs. uniprot
Match: B5YMN0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMN0_THAPS)

HSP 1 Score: 65.9 bits (159), Expect = 7.600e-12
Identity = 30/61 (49.18%), Postives = 36/61 (59.02%), Query Frame = 0
Query:   27 DIQPQLKKWWKGTPQMDGVVTQSLSPFEQQIVQPWIKTIPDKIKKKIVDDFPPTIPALIFV 87
            D+ P + KWWKG    DG +T+ LSPFEQQI+ PWIKT P +   K  D  P  I   I V
Sbjct:   17 DVSPHMSKWWKGVRPDDGQITRHLSPFEQQIIVPWIKTWPKRAYAKFADSGPYLIATFIIV 77          
BLAST of mRNA_H-akashiwo_Contig81.28.1 vs. uniprot
Match: K0SGS2_THAOC (Cytochrome b-c1 complex subunit 8 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SGS2_THAOC)

HSP 1 Score: 65.1 bits (157), Expect = 1.280e-11
Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 0
Query:   19 AMFAAEKNDIQPQLKKWWKGTPQMDGVVTQSLSPFEQQIVQPWIKTIPDKIKKKIVDDFPPTIPALIFVAITLGYCES 96
            AM    + D+ P +K WWKG    +G +T+ LSPFEQQ++ PW+KT P +   K  D  P  +   I V  T  + ++
Sbjct:    2 AMVKGPRYDVSPHMKTWWKGVRPDEGQITRHLSPFEQQVMMPWLKTWPKRAYVKFADSGPYLVATAILVYGTAAWSDA 79          
BLAST of mRNA_H-akashiwo_Contig81.28.1 vs. uniprot
Match: A0A2R5GU00_9STRA (Cytochrome b-c1 complex subunit 8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GU00_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.080e-9
Identity = 27/86 (31.40%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   22 AAEKNDIQPQLKKWWKGTPQMDGVVTQSLSPFEQQIVQPWIKTIPDKIKKKIVDDFPPTIPALIFVAITLGYCESEKKRLSMEHRD 107
            A    ++ P L K WK    ++G+VT+++SP++Q  + PW+KT P+K+K KI D+     P ++ +  T+ + ++  +    +HRD
Sbjct:    2 APPMKNVHPGLAKLWKKYKPINGLVTRTVSPYQQDFITPWVKTWPEKMKHKISDNLFDVGPGVLVLFGTVAWADATFESEMKKHRD 87          
BLAST of mRNA_H-akashiwo_Contig81.28.1 vs. uniprot
Match: W7TKM2_9STRA (Cytochrome b-c1 complex subunit 8 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM2_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.180e-8
Identity = 28/85 (32.94%), Postives = 49/85 (57.65%), Query Frame = 0
Query:   24 EKNDIQPQLKKWWK-GTPQMDGVVTQSLSPFEQQIVQPWIKTIPDKIKKKIVDDFPPTIPALIFVAITLGYCESEKKRLSMEHRD 107
            E+ D+   ++KWWK G  + +G++T+SLSPFEQ+I+ P     P+K+ K +       +PA +    T+ + + E  ++  EH D
Sbjct:   16 ERVDVSLSMRKWWKLGYTRQNGLITKSLSPFEQRIISPMFDDAPNKVLKYLKRWSTTILPAFVITYSTVKWADWEFDQIHREHWD 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig81.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6V1P0L7_HETAK2.270e-7199.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B5YMN0_THAPS7.600e-1249.18Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
K0SGS2_THAOC1.280e-1137.18Cytochrome b-c1 complex subunit 8 n=1 Tax=Thalassi... [more]
A0A2R5GU00_9STRA1.080e-931.40Cytochrome b-c1 complex subunit 8 n=1 Tax=Hondaea ... [more]
W7TKM2_9STRA1.180e-832.94Cytochrome b-c1 complex subunit 8 n=2 Tax=Monodops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020101Cytochrome b-c1 complex subunit 8, plantsPFAMPF10890Cyt_b-c1_8coord: 46..107
e-value: 5.4E-6
score: 26.7
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyGENE3D1.20.5.210coord: 33..107
e-value: 2.3E-7
score: 32.8
IPR036642Cytochrome b-c1 complex subunit 8 superfamilySUPERFAMILY81508Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 38..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig81contigH-akashiwo_Contig81:1161872..1162439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig81.28.1mRNA_H-akashiwo_Contig81.28.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig81 1161843..1162679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig81.28.1 ID=prot_H-akashiwo_Contig81.28.1|Name=mRNA_H-akashiwo_Contig81.28.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=108bp
MALRRTLAVGGPVRRSFAAMFAAEKNDIQPQLKKWWKGTPQMDGVVTQSL
SPFEQQIVQPWIKTIPDKIKKKIVDDFPPTIPALIFVAITLGYCESEKKR
LSMEHRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020101Cyt_b-c1_8-plants
IPR036642Cyt_bc1_su8_sf