prot_H-akashiwo_Contig79.21.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig79.21.1
Unique Nameprot_H-akashiwo_Contig79.21.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length97
Homology
BLAST of mRNA_H-akashiwo_Contig79.21.1 vs. uniprot
Match: D8LJG4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG4_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.100e-13
Identity = 39/95 (41.05%), Postives = 63/95 (66.32%), Query Frame = 0
Query:    1 MEESLQLKEQLRQTNDDLQRSANEMAKLQDELMKMKASFQCQICFTNDVDQILTPCGHLLCSTCKGSLRSLRPSCPFCRKAFSASYPFYKPTTDD 95
            ++ESL+ K++ R     L +++ E  +L+ +L K+  +F C IC TNDVD IL PCGH++CS+C  S+  +R  CPFCR+ ++A+  F +P  D+
Sbjct: 2320 LKESLRHKDEARVARVALAKTSAEADRLKRKLAKVDKAFVCSICCTNDVDVILAPCGHMMCSSCMRSI--VRRECPFCRERWTATATFRRPGVDE 2412          
BLAST of mRNA_H-akashiwo_Contig79.21.1 vs. uniprot
Match: W7U1E4_9STRA (Ubiquitin-associated/translation elongation factor EF1B n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1E4_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.340e-12
Identity = 34/86 (39.53%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    4 SLQLKEQLRQTNDDLQRSANEMAKLQDELMKMKASFQCQICFTNDVDQILTPCGHLLCSTCKGSLRSLRPSCPFCRKAFSASYPFY 89
            +++L+  L    D+ Q    EM +L  +L  +K++FQC ICF  +V++IL PCGH  C++C+ S+R     CPFCR+A  + +PF+
Sbjct: 5499 NIRLQRDLESARDETQSVREEMLELSAKLESIKSAFQCHICFQRNVNEILAPCGHTTCTSCRESVRV----CPFCREAIKSFFPFH 5580          
BLAST of mRNA_H-akashiwo_Contig79.21.1 vs. uniprot
Match: A0A067CGM9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGM9_SAPPC)

HSP 1 Score: 60.8 bits (146), Expect = 1.130e-8
Identity = 31/91 (34.07%), Postives = 52/91 (57.14%), Query Frame = 0
Query:    1 MEESLQLKEQLRQTNDDLQRSANEMAKLQDELMKMKASFQCQICFTNDVDQILTPCGHLLCSTCKGSLRSLRPSCPFCRKAFSASYPFYKP 91
            ++E+L+LK++L    +  + ++  + +   E  ++  +  C +CF NDV+++L PCGH+ CS C G  R  R  CP CR   S    F+KP
Sbjct: 4351 VQETLRLKQRLAHAEESYRAASERIEEALVEKKEVLEAMTCSVCFENDVNRVLVPCGHVFCSACVG--RFPRNKCPTCRHDISTHCAFHKP 4439          
BLAST of mRNA_H-akashiwo_Contig79.21.1 vs. uniprot
Match: UPI001036CEF4 (E3 ubiquitin-protein ligase RNF34-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036CEF4)

HSP 1 Score: 53.9 bits (128), Expect = 6.080e-7
Identity = 28/91 (30.77%), Postives = 49/91 (53.85%), Query Frame = 0
Query:    1 MEESLQLKEQLRQTNDDLQRSANEMAKLQDELMKMKASFQCQICFTNDVDQILTPCGHLLCSTCKGSLRSLRPSCPFCRKAFSASYPFYKP 91
            ++ +L L+EQL+++   L     +      E    KA++ C++C TN+VD  + PCGH+LC  C  ++      CPFCR   + +   ++P
Sbjct:   56 LQTTLTLQEQLKESQATLLLEQEKSDMAAKEADSAKAAWICRVCLTNEVDNTIVPCGHVLCRRCSSAVSR----CPFCRLQVTKTMRIFRP 142          
BLAST of mRNA_H-akashiwo_Contig79.21.1 vs. uniprot
Match: A0A4S4CXI8_CAMSI (RING-type domain-containing protein n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4CXI8_CAMSI)

HSP 1 Score: 53.9 bits (128), Expect = 6.980e-7
Identity = 28/91 (30.77%), Postives = 49/91 (53.85%), Query Frame = 0
Query:    1 MEESLQLKEQLRQTNDDLQRSANEMAKLQDELMKMKASFQCQICFTNDVDQILTPCGHLLCSTCKGSLRSLRPSCPFCRKAFSASYPFYKP 91
            ++ +L L+EQL+++   L     +      E    KA++ C++C TN+VD  + PCGH+LC  C  ++      CPFCR   + +   ++P
Sbjct:   64 LQTTLTLQEQLKESQATLLLEQEKSDMAAKEADSAKAAWICRVCLTNEVDNTIVPCGHVLCRRCSSAVSR----CPFCRLQVTKTMRIFRP 150          
BLAST of mRNA_H-akashiwo_Contig79.21.1 vs. uniprot
Match: A0A7J0GY18_9ERIC (Zinc finger, C3HC4 type (RING finger) family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GY18_9ERIC)

HSP 1 Score: 53.5 bits (127), Expect = 4.140e-6
Identity = 28/91 (30.77%), Postives = 50/91 (54.95%), Query Frame = 0
Query:    1 MEESLQLKEQLRQTNDDLQRSANEMAKLQDELMKMKASFQCQICFTNDVDQILTPCGHLLCSTCKGSLRSLRPSCPFCRKAFSASYPFYKP 91
            ++ +L L+EQL+++   L     +   +  E    KA++ C++C +N+VD  + PCGH+LC  C  ++      CPFCR   S +   ++P
Sbjct: 1534 LQTTLILQEQLKESQATLLLEQEKSDMVAKEADTAKAAWLCRVCLSNEVDNTIVPCGHVLCRRCSSAVSR----CPFCRLQVSKTMRIFRP 1620          
BLAST of mRNA_H-akashiwo_Contig79.21.1 vs. uniprot
Match: A0A2R6PGJ9_ACTCC (Sacsin like n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6PGJ9_ACTCC)

HSP 1 Score: 53.5 bits (127), Expect = 4.220e-6
Identity = 28/91 (30.77%), Postives = 50/91 (54.95%), Query Frame = 0
Query:    1 MEESLQLKEQLRQTNDDLQRSANEMAKLQDELMKMKASFQCQICFTNDVDQILTPCGHLLCSTCKGSLRSLRPSCPFCRKAFSASYPFYKP 91
            ++ +L L+EQL+++   L     +   +  E    KA++ C++C +N+VD  + PCGH+LC  C  ++      CPFCR   S +   ++P
Sbjct: 4681 LQTTLILQEQLKESQATLLLEQEKSDMVAKEADTAKAAWLCRVCLSNEVDNTIVPCGHVLCRRCSSAVSR----CPFCRLQVSKTMRIFRP 4767          
BLAST of mRNA_H-akashiwo_Contig79.21.1 vs. uniprot
Match: A0A7S3VIT3_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VIT3_DUNTE)

HSP 1 Score: 53.1 bits (126), Expect = 5.660e-6
Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 0
Query:   31 ELMKMKASFQCQICFTNDVDQILTPCGHLLCSTCKGSLRSLRPSCPFCRKAFSASYPFYK 90
            EL  ++ S+QC+ICF NDVD     CGH++CS+C   ++     CP CR   S     YK
Sbjct: 1627 ELEGVRQSWQCKICFANDVDSAYVSCGHMVCSSCATGMQR----CPVCRSRSSQLIRLYK 1682          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig79.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LJG4_ECTSI1.100e-1341.05RING-type domain-containing protein n=1 Tax=Ectoca... [more]
W7U1E4_9STRA1.340e-1239.53Ubiquitin-associated/translation elongation factor... [more]
A0A067CGM9_SAPPC1.130e-834.07Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
UPI001036CEF46.080e-730.77E3 ubiquitin-protein ligase RNF34-like n=1 Tax=Cam... [more]
A0A4S4CXI8_CAMSI6.980e-730.77RING-type domain-containing protein n=1 Tax=Camell... [more]
A0A7J0GY18_9ERIC4.140e-630.77Zinc finger, C3HC4 type (RING finger) family prote... [more]
A0A2R6PGJ9_ACTCC4.220e-630.77Sacsin like n=1 Tax=Actinidia chinensis var. chine... [more]
A0A7S3VIT3_DUNTE5.660e-641.67Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..38
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 39..82
e-value: 1.3E-12
score: 47.4
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 22..88
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 41..78
e-value: 0.0016
score: 27.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 41..79
score: 11.559839
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 21..95
e-value: 4.9E-16
score: 59.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig79contigH-akashiwo_Contig79:1211641..1214584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig79.21.1mRNA_H-akashiwo_Contig79.21.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig79 1211640..1214928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig79.21.1 ID=prot_H-akashiwo_Contig79.21.1|Name=mRNA_H-akashiwo_Contig79.21.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=97bp
MEESLQLKEQLRQTNDDLQRSANEMAKLQDELMKMKASFQCQICFTNDVD
QILTPCGHLLCSTCKGSLRSLRPSCPFCRKAFSASYPFYKPTTDDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD