prot_H-akashiwo_Contig1253.1.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1253.1.1
Unique Nameprot_H-akashiwo_Contig1253.1.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length196
Homology
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 352 bits (903), Expect = 4.510e-121
Identity = 169/190 (88.95%), Postives = 179/190 (94.21%), Query Frame = 0
Query:    1 MTDDVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSLGFQRSGHESCLCTRRDGSDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARKTPIDHTVDLTPTPGFKGELSDANMYRSMVGTLAWVANWTR 190
            MTDDVYVRQPP Y+DPQHP+KVWKLNKALYGLKQSPRVWYMELH+HL SLGF+RSGHESCL   RDG +ELMVAVYVDDLVISGSS A+VS+FKQSLASKY+LTDQGELTQILGIKVVRDKR KCF+LSQTSFIKDAL KFGLDYLPA KTPIDHTVDLTPTPGFK ELSDAN+YRSMVGTLAWVANWTR
Sbjct:   47 MTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTR 236          
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 267 bits (682), Expect = 2.840e-86
Identity = 131/150 (87.33%), Postives = 139/150 (92.67%), Query Frame = 0
Query:   41 MELHNHLLSLGFQRSGHESCLCTRRDGSDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARKTPIDHTVDLTPTPGFKGELSDANMYRSMVGTLAWVANWTR 190
            MELH+HL SLGF+RSGHESCL   RDG +ELMVAVYVDDLVISGSS A+VS+FKQSLASKY LTDQGELTQILGIKVVRDKR KCF+LSQTSFIKDAL KFGLDYLPA KTP+DHTVDLTPTPGFK ELSDAN+YRSMVGTLAWVANWTR
Sbjct:    1 MELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTR 150          
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK)

HSP 1 Score: 224 bits (570), Expect = 1.080e-68
Identity = 106/172 (61.63%), Postives = 129/172 (75.00%), Query Frame = 0
Query:    4 DVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSLGFQRSGHESCLCTRRDG--SDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARKTPIDHTVDLTPTPGFKGELSDAN 173
            DVYV+QPPG++D  HP KVWKL KALYGL+QSPR+WY  LH  LL   F RS +ESCL TR++    ++ MVAVYVDDLV+S + P++VS  K S  S++ +TD G LT ILGIKV RD   KCFYLSQ SF++DA+ KFGLDYLPA +TP+ +  DLTPTPGFK  L DAN
Sbjct:  238 DVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409          
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: H3H934_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H934_PHYRM)

HSP 1 Score: 147 bits (371), Expect = 3.910e-40
Identity = 75/189 (39.68%), Postives = 117/189 (61.90%), Query Frame = 0
Query:    1 MTDDVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSLGFQRSGHESCLCTRRDGSDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARKTPIDHTVDLTPTP---GFKGELSDANM-YRSMVGTLAWV 185
            + +D+Y+ QP GY+D  HPD V KL ++LYGLKQSPR+W   + + +L LGF++   + C+  +RDG D + VA+YVDDLV++ S+  L+   K +L+ ++++TD GEL   LG+++  D+      + QT F+K  L KFG+      KTP D  + LT +    G + E +  N+ YRS VG L ++
Sbjct:  106 LDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRDGQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKSMCEGGCQHEDTMKNVPYRSAVGALMYL 294          
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: H3H1B2_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1B2_PHYRM)

HSP 1 Score: 150 bits (378), Expect = 1.400e-39
Identity = 78/194 (40.21%), Postives = 117/194 (60.31%), Query Frame = 0
Query:    1 MTDDVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSLGFQRSGHESCLCTRRDGSDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARKTPIDHTVDLTPTPGFKGELSDANM----YRSMVGTLAWVANWTR 190
            + +D+Y+ QP GY+D  HPD V KL ++LYGLKQSPR+W   + + +L LGF++   + C+  +RDG D + VA+YVDDLV++ SS  ++ D KQ+L+ ++++TD G+L   LG+++ +D       + QT F KD L KF +D     KTP D  + LT      G   D  M    YR+ VG L ++   TR
Sbjct:  145 LDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRDGHDMIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTR 338          
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK)

HSP 1 Score: 149 bits (375), Expect = 1.640e-39
Identity = 71/119 (59.66%), Postives = 88/119 (73.95%), Query Frame = 0
Query:    4 DVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSLGFQRSGHESCLCTRRDG--SDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRD 120
            DVYV+QPPG++D  HP KVWKL KALYGL+QSPR+WY  LH  LL   F RS +ESCL TR++    ++ MVAVYVDDLV+S + P++VS  K S  S++ +TD G LT ILGIKV RD
Sbjct:  309 DVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRD 427          
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: A0A5E4GBA0_PRUDU (PREDICTED: Retrovirus-related Pol poly from (Fragment) n=3 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4GBA0_PRUDU)

HSP 1 Score: 141 bits (356), Expect = 6.050e-39
Identity = 73/185 (39.46%), Postives = 116/185 (62.70%), Query Frame = 0
Query:    1 MTDDVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSLGFQRSGHESCLCTRRDGSDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARKTPIDHTVDLTPTPGFKGELSDANMYRSMVGTLAWV 185
            ++++VYV QP G++     DKV++L KALYGLKQ+PR WY E++++   +GFQRS  E+ L T+R  S  L+V++YVDD++ +GSS  ++ +FK  +  +Y++TD G L   LG+ V++     C +L Q  + K  L KFGL    +  TP+     L+   G   +L+D  +YR MVG+L ++
Sbjct:   19 LSEEVYVDQPLGFVIQGSEDKVYRLKKALYGLKQAPRAWYEEINSYFTKVGFQRSLSEATLYTKRSPSGILIVSLYVDDIIYTGSSKEMMLEFKNEMMRQYEMTDLGLLHHFLGLGVLQTD--SCIFLHQKKYAKTLLDKFGLKDCKSVATPLAVNEKLSKVDG--SDLADETLYRQMVGSLLYL 199          
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: W9QMZ8_9ROSA (ABC-type xenobiotic transporter n=1 Tax=Morus notabilis TaxID=981085 RepID=W9QMZ8_9ROSA)

HSP 1 Score: 150 bits (380), Expect = 1.260e-38
Identity = 72/185 (38.92%), Postives = 123/185 (66.49%), Query Frame = 0
Query:    1 MTDDVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSLGFQRSGHESCLCTRRDGSDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARKTPIDHTVDLTPTPGFKGELSDANMYRSMVGTLAWV 185
            + ++++V QPP ++   + DKV++L KALYGLKQ+PR WY  + +HLL LGF+RS  E+ L  ++ G D L++++YVDDL+I+GS+  LV  FK+ + + +++TD GE++  LG+K+++ ++G   ++SQ  + KD L KFG++      TP+     L+   G   +  DA +YRS++G L ++
Sbjct: 1045 LKEEIFVEQPPCFLKKGNEDKVYQLKKALYGLKQAPRAWYSRIDDHLLQLGFKRSPSEATLYVQQAGDDLLIISLYVDDLLITGSNITLVQKFKKEMQNVFEMTDLGEMSYFLGMKILQTEQG--IFISQEKYAKDVLKKFGMENCKDVSTPLGLNEKLSKEDG--SDKIDAGIYRSLIGCLLYL 1225          
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: A0A6D2HVH8_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HVH8_9BRAS)

HSP 1 Score: 145 bits (367), Expect = 1.490e-38
Identity = 76/185 (41.08%), Postives = 115/185 (62.16%), Query Frame = 0
Query:    1 MTDDVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSLGFQRSGHESCLCTRRDGSDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARKTPIDHTVDLTPTPGFKGELSDANMYRSMVGTLAWV 185
            +TD+VYV QPPG+ID   PD   +L+KALYGLKQ+PR WY EL N+LL+LGFQ S  ++ +     G+D L   VYVDD++++GSS ALV  F  +++S++ L D  +L+  LGI+  R ++G   +L Q  +I D L +  +       TP+  T  L+    F   L D + YR+++G+L ++
Sbjct:   60 LTDEVYVTQPPGFIDKDRPDHACRLHKALYGLKQAPRAWYQELRNYLLALGFQNSLADTSVFVYSKGADLLYTLVYVDDIIVTGSSTALVDRFIAAISSRFSLKDPTDLSYFLGIEATRSQKG--LHLMQRKYIIDLLTRTNMLNSKPVATPMSPTPKLSLN--FGSPLDDPSQYRTVIGSLQYL 240          
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Match: H3H839_PHYRM (Integrase catalytic domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H839_PHYRM)

HSP 1 Score: 150 bits (379), Expect = 1.570e-38
Identity = 78/194 (40.21%), Postives = 117/194 (60.31%), Query Frame = 0
Query:    1 MTDDVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSLGFQRSGHESCLCTRRDGSDELMVAVYVDDLVISGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARKTPIDHTVDLTPTPGFKGELSDANM----YRSMVGTLAWVANWTR 190
            + +D+Y+ QP GY+D  HPD V KL ++LYGLKQSPR+W   + + +L LGF++   + C+  +RDG D + VA+YVDDLV++ SS  ++ D KQ+L+ ++++TD G+L   LG+++ +D       + QT F KD L KF +D     KTP D  + LT      G   D  M    YR+ VG L ++   TR
Sbjct:  539 LDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRDGQDMIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTR 732          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1253.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y6S2_HETAK4.510e-12188.95Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4DD78_HETAK2.840e-8687.33Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y3B6_HETAK1.080e-6861.63Hypothetical protein (Fragment) n=6 Tax=Heterosigm... [more]
H3H934_PHYRM3.910e-4039.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H1B2_PHYRM1.400e-3940.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7S3Y3C5_HETAK1.640e-3959.66Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A5E4GBA0_PRUDU6.050e-3939.46PREDICTED: Retrovirus-related Pol poly from (Fragm... [more]
W9QMZ8_9ROSA1.260e-3838.92ABC-type xenobiotic transporter n=1 Tax=Morus nota... [more]
A0A6D2HVH8_9BRAS1.490e-3841.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H839_PHYRM1.570e-3840.21Integrase catalytic domain-containing protein n=4 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..153
e-value: 3.8E-39
score: 134.8
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..162
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 14..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1253contigH-akashiwo_Contig1253:66529..67116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1253.1.1mRNA_H-akashiwo_Contig1253.1.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1253 66487..67447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1253.1.1 ID=prot_H-akashiwo_Contig1253.1.1|Name=mRNA_H-akashiwo_Contig1253.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=196bp
MTDDVYVRQPPGYIDPQHPDKVWKLNKALYGLKQSPRVWYMELHNHLLSL
GFQRSGHESCLCTRRDGSDELMVAVYVDDLVISGSSPALVSDFKQSLASK
YDLTDQGELTQILGIKVVRDKRGKCFYLSQTSFIKDALIKFGLDYLPARK
TPIDHTVDLTPTPGFKGELSDANMYRSMVGTLAWVANWTRRSWPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf