prot_H-akashiwo_Contig125.41.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig125.41.1
Unique Nameprot_H-akashiwo_Contig125.41.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length180
Homology
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BLAST of mRNA_H-akashiwo_Contig125.41.1 vs. uniprot
Match: A0A7S3WCJ3_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WCJ3_EMIHU)

HSP 1 Score: 62.0 bits (149), Expect = 4.040e-8
Identity = 60/131 (45.80%), Postives = 65/131 (49.62%), Query Frame = 0 
Query:    3 RAHPPVLHDDGPGHGGGAAVQRPHGGRALRAGGAHRGLALLRGLRAGAAGLERLGAAGLLQLRAQED--LQDDLGLHGRAGGRGLHEQHLLPGRVHAAGAGQGAGLGVQRRDDLHPLRGGGYGALRAQEGT 131
            RA PP+L              RP+GGRAL    AH   ALL      AA LERL       LRAQED  L   L LH R GGR LHEQHLLP  +H A   Q A L + RRD  HP R G    L A+ G 
Sbjct:  166 RARPPLL--------------RPYGGRALEPRRAHGRPALLHLFYLRAARLERLRXXXXGLLRAQEDAPLNHHLPLHAR-GGR-LHEQHLLPRHLHGARRLQPARLALHRRDAGHPRRRGHRRRLCARAGA 280
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig125.41.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3WCJ3_EMIHU4.040e-845.80Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig125contigH-akashiwo_Contig125:1369214..1372750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig125.41.1mRNA_H-akashiwo_Contig125.41.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig125 1369214..1372942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig125.41.1 ID=prot_H-akashiwo_Contig125.41.1|Name=mRNA_H-akashiwo_Contig125.41.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=180bp
AGRAHPPVLHDDGPGHGGGAAVQRPHGGRALRAGGAHRGLALLRGLRAGA
AGLERLGAAGLLQLRAQEDLQDDLGLHGRAGGRGLHEQHLLPGRVHAAGA
GQGAGLGVQRRDDLHPLRGGGYGALRAQEGTHFAGWGVDCQFVPDFSGFG
CKHGSCRDELVMIIIIQTASIILSFSRSM*
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