prot_H-akashiwo_Contig1244.8.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1244.8.1
Unique Nameprot_H-akashiwo_Contig1244.8.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length71
Homology
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: A0A8J4EVV6_9CHLO (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EVV6_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 5.180e-9
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQKNPAAR 68
            QV+VP D AIR+ LIA  HS  + GH G T+ +  LR  +WW    +D+  +++ C  CQR K+ + +
Sbjct:  151 QVMVPNDDAIRRDLIAKYHSGPLSGHPGVTRLIEQLRRGFWWPRMAKDVANFIQRCSECQRNKSASGK 218          
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: A0A8J4B5U4_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B5U4_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 5.280e-9
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQKNPAAR 68
            QV+VP D AIR+ LIA  HS  + GH G T+ +  LR  +WW    +D+  +++ C  CQR K+ + +
Sbjct:  116 QVMVPNDDAIRRDLIAKYHSGPLSGHPGVTRLIEQLRRGFWWPRMAKDVANFIQHCSECQRNKSASGK 183          
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: A0A8J4F873_9CHLO (Integrase_H2C2 domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F873_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 2.510e-8
Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQK 63
            Q+VVP D A+R+ ++A  H   + GH G+T+ +  +R  +WW     D   +VR+C  CQR K
Sbjct:    6 QIVVPNDDALRRDILARFHEDPLAGHPGSTRLVELVRRSFWWPRLVTDAENFVRTCSSCQRNK 68          
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: A0A392M1S8_9FABA (Retrotransposon protein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M1S8_9FABA)

HSP 1 Score: 57.4 bits (137), Expect = 6.540e-8
Identity = 24/64 (37.50%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQKN 64
            ++++P +  I K ++   H+  +GGH G T+TMA +RA ++WKN  +D+  YV+ C  CQ+ K+
Sbjct:  398 KLLIPNNSDIIKHILNEFHTSHIGGHAGVTRTMARIRAQFYWKNMREDIKKYVQHCVICQQAKS 461          
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: Q84ZV5_SOYBN (Polyprotein n=1 Tax=Glycine max TaxID=3847 RepID=Q84ZV5_SOYBN)

HSP 1 Score: 57.4 bits (137), Expect = 6.610e-8
Identity = 23/64 (35.94%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQKN 64
            +VV+PA++ I  +++   HS  +GGH G T+T+A L+A ++W    +D+  Y++ C  CQ+ K+
Sbjct: 1061 RVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQQAKS 1124          
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: A0A7D9K8X7_PARCT (Transposon Ty3-G Gag-Pol poly (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9K8X7_PARCT)

HSP 1 Score: 57.0 bits (136), Expect = 8.940e-8
Identity = 24/68 (35.29%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQKNPAAR 68
            Q+V+P   A++ +++ WAH     GH GT KT   +R  Y+W+N ++D+  + +SC  C  +K+P  R
Sbjct:  634 QLVIP--DALKHEVLVWAHDDATAGHLGTQKTYGKIRTRYYWRNMFRDIDRWCKSCVDCAMKKSPRNR 699          
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: A0A8J4F859_9CHLO (Integrase_H2C2 domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F859_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 9.200e-8
Identity = 23/63 (36.51%), Postives = 37/63 (58.73%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQK 63
            ++VVP D A+R+ ++A  H   + GH G+T+ +  +R  +WW     D   +VR+C  CQR K
Sbjct:   38 RIVVPNDDALRRDILARFHKDPLAGHPGSTRLVELVRRSFWWPRLVTDAENFVRTCSSCQRNK 100          
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: A0A8J4BAT9_9CHLO (Integrase_H2C2 domain-containing protein (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BAT9_9CHLO)

HSP 1 Score: 54.3 bits (129), Expect = 1.040e-7
Identity = 23/63 (36.51%), Postives = 37/63 (58.73%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQK 63
            ++VVP D A+R+ ++A  H   + GH G+T+ +  +R  +WW     D   +VR+C  CQR K
Sbjct:   13 RIVVPNDDALRRDILARFHEDPLAGHPGSTRLVELVRRSFWWPRLVTDAENFVRTCSLCQRNK 75          
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: A0A8J4BSW9_9CHLO (Integrase_H2C2 domain-containing protein (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BSW9_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 1.080e-7
Identity = 23/63 (36.51%), Postives = 37/63 (58.73%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQK 63
            ++VVP D A+R+ ++A  H   + GH G+T+ +  +R  +WW     D   +VR+C  CQR K
Sbjct:   21 RIVVPNDDALRRDILACFHEDPLAGHPGSTRLVELVRRSFWWPRLVTDAENFVRTCSSCQRNK 83          
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Match: A0A8J4CEU0_9CHLO (Integrase_H2C2 domain-containing protein (Fragment) n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CEU0_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 1.140e-7
Identity = 23/63 (36.51%), Postives = 38/63 (60.32%), Query Frame = 0
Query:    1 QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLMTYVRSCKRCQRQK 63
            Q+VVP D A+R+ ++A  H   + GH G+T+ +  +R  +WW    +D   +V++C  CQR K
Sbjct:   17 QIVVPNDDALRRDILARFHEDPLAGHPGSTRLVELVRRSFWWSRLARDAENFVQTCSLCQRNK 79          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1244.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4EVV6_9CHLO5.180e-939.71Integrase catalytic domain-containing protein (Fra... [more]
A0A8J4B5U4_9CHLO5.280e-939.71Uncharacterized protein n=2 Tax=Volvox africanus T... [more]
A0A8J4F873_9CHLO2.510e-838.10Integrase_H2C2 domain-containing protein n=1 Tax=V... [more]
A0A392M1S8_9FABA6.540e-837.50Retrotransposon protein n=1 Tax=Trifolium medium T... [more]
Q84ZV5_SOYBN6.610e-835.94Polyprotein n=1 Tax=Glycine max TaxID=3847 RepID=Q... [more]
A0A7D9K8X7_PARCT8.940e-835.29Transposon Ty3-G Gag-Pol poly (Fragment) n=1 Tax=P... [more]
A0A8J4F859_9CHLO9.200e-836.51Integrase_H2C2 domain-containing protein n=1 Tax=V... [more]
A0A8J4BAT9_9CHLO1.040e-736.51Integrase_H2C2 domain-containing protein (Fragment... [more]
A0A8J4BSW9_9CHLO1.080e-736.51Integrase_H2C2 domain-containing protein (Fragment... [more]
A0A8J4CEU0_9CHLO1.140e-736.51Integrase_H2C2 domain-containing protein (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 7..64
e-value: 3.7E-19
score: 68.5
NoneNo IPR availableGENE3D1.10.340.70coord: 1..63
e-value: 1.4E-16
score: 62.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1244contigH-akashiwo_Contig1244:222602..222814 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1244.8.1mRNA_H-akashiwo_Contig1244.8.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1244 222602..222814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1244.8.1 ID=prot_H-akashiwo_Contig1244.8.1|Name=mRNA_H-akashiwo_Contig1244.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=71bp
QVVVPADQAIRKQLIAWAHSLGVGGHTGTTKTMATLRAHYWWKNQYQDLM
TYVRSCKRCQRQKNPAARLRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041588Integrase_H2C2