prot_H-akashiwo_Contig1213.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1213.2.1
Unique Nameprot_H-akashiwo_Contig1213.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length236
Homology
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 464 bits (1194), Expect = 1.060e-164
Identity = 225/236 (95.34%), Postives = 232/236 (98.31%), Query Frame = 0
Query:    1 LDYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYVRQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGHESCLYVHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPEL 236
            +D+QQT+SPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGA+TDDVYVRQPP YV+PQHPNKVWKLNKALYGLKQSPRVWYMELHDHL SLGF RSGHESCLY+HRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHL QTSFIKDALAKFGLDYLPACKTP+DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPEL
Sbjct:    4 IDFQQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPEL 239          
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 303 bits (776), Expect = 7.760e-100
Identity = 147/153 (96.08%), Postives = 150/153 (98.04%), Query Frame = 0
Query:   84 MELHDHLVSLGFTRSGHESCLYVHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPEL 236
            MELHDHL SLGF RSGHESCLY+HRDGGNELMVAVYVDDLVISGSSQA+VSEFKQSLASKY+LTDQGELTQILGIKVVRDKRNKCFHL QTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPEL
Sbjct:    1 MELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPEL 153          
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK)

HSP 1 Score: 283 bits (724), Expect = 3.150e-91
Identity = 133/217 (61.29%), Postives = 170/217 (78.34%), Query Frame = 0
Query:    2 DYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYVRQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGHESCLYVHRDG--GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDAN 216
            D+  T+SPV+ A SLRL+L+I+ANKG+AV++LDISTAFLN  I  DVYV+QPPG+V+  HP+KVWKL KALYGL+QSPR+WY  LH+ L+   F RS +ESCLY  ++   G + MVAVYVDDLV+S +  ++VS  K S  S++++TD G LT ILGIKV RD  NKCF+L Q SF++DA++KFGLDYLPAC+TP+ +  DLTPTPGFKA L DAN
Sbjct:  193 DFSTTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409          
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK)

HSP 1 Score: 204 bits (519), Expect = 3.420e-60
Identity = 99/167 (59.28%), Postives = 127/167 (76.05%), Query Frame = 0
Query:    2 DYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYVRQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGHESCLYVHRDG--GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRN 166
            D+  T+SPVV A SLRL+L+I+ANKG+AV++LDISTAFLN  I  DVYV+QPPG+V+  HP+KVWKL KALYGL+QSPR+WY  LH+ L+   F RS +ESCLY  ++   G + MVAVYVDDLV+S +  ++VS  K S  S++++TD G LT ILGIKV RD  N
Sbjct:  264 DFSATYSPVVAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTN 430          
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: H3H1B2_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1B2_PHYRM)

HSP 1 Score: 194 bits (492), Expect = 1.120e-55
Identity = 96/240 (40.00%), Postives = 152/240 (63.33%), Query Frame = 0
Query:    1 LDYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYVRQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGHESCLYVHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTP---GFKAELSDANL-YRSMVGTLAWVANWTRPEL 236
            +DY +TF+PV    S+R++L+++A  G  +  +D+ TAFLNG + +D+Y+ QP GYV+  HP+ V KL ++LYGLKQSPR+W   + D ++ LGF +   + C+Y+ RDG + + VA+YVDDLV++ SS  ++ + KQ+L+ ++ +TD G+L   LG+++ +D       + QT F KD L KF +D     KTP D  + LT      G K + +  N+ YR+ VG L ++   TRP+L
Sbjct:  102 IDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRDGHDMIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDL 341          
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: H3GB73_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB73_PHYRM)

HSP 1 Score: 191 bits (484), Expect = 1.690e-55
Identity = 93/240 (38.75%), Postives = 151/240 (62.92%), Query Frame = 0
Query:    1 LDYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYVRQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGHESCLYVHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTP---GFKAELSDANL-YRSMVGTLAWVANWTRPEL 236
            +DY +TF+PV    S+R++L+++A  G  +  +D+ TAFL+G + +D+Y+ QP GYVN  HP+ V KL ++LYGLKQSPR+W   + D ++ LGF +   + C+Y+ RDG + + VA+Y++D V++ SS  I+ + KQ+L+ ++ +TD G+L   LG+++ +D       + QT F KD + KF +D     KTP D  + LT      G K + +  N+ YR+ VG L ++   TRP+L
Sbjct:   72 IDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLDGVLDEDIYMAQPDGYVNEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRDGQDMIFVALYINDFVLASSSDKILLDTKQALSKRFEMTDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDIMQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDL 311          
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 199 bits (507), Expect = 3.210e-55
Identity = 102/239 (42.68%), Postives = 157/239 (65.69%), Query Frame = 0
Query:    2 DYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYVRQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGHESCLY--VHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELS--DANLYRSMVGTLAWVANWTRPEL 236
            DY  TFSPVV++ASLR +L I+A++   +  +DI TAFL+G + +D+Y++QP GY  P   +KV KL K+LYGLKQ+P+ WY  L+  L+  G+TR+G++SC+Y  V   GG  L ++VYVDD+V++ S ++ +S  K++++  YN++D GE+  ILGIKV RD+  +   L Q SFI++A  KF +        P++  +D+         LS  +A  +RS+VGT+ W+A WT PE+
Sbjct:  563 DYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTL-ISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEV 800          
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: H3H7U0_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7U0_PHYRM)

HSP 1 Score: 191 bits (486), Expect = 1.380e-54
Identity = 95/240 (39.58%), Postives = 150/240 (62.50%), Query Frame = 0
Query:    1 LDYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYVRQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGHESCLYVHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTP---GFKAELSDANL-YRSMVGTLAWVANWTRPEL 236
            +DY +TF+PV    S+R++L+++A  G  +  +D+ TAFLNG + +D+Y+ QP GYV+  HP+ V KL ++LYGLKQSPR+W   + D ++ LGF +   + C+Y+ RDG + + VA+YVDDLV++ S+  ++   K +L+ ++ +TD GEL   LG+++ +D       + QT F KD L KF +D     KTP D  + LT      G K + +  N+ YR+ VG L ++   TRP+L
Sbjct:  239 IDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRDGQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDL 478          
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: H3H934_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H934_PHYRM)

HSP 1 Score: 185 bits (470), Expect = 2.310e-54
Identity = 91/232 (39.22%), Postives = 147/232 (63.36%), Query Frame = 0
Query:    1 LDYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYVRQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGHESCLYVHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTP---GFKAELSDANL-YRSMVGTLAWV 228
            +DY +TF+PV    S+R++L+++A  G  +  +D+ TAFLNG + +D+Y+ QP GYV+  HP+ V KL ++LYGLKQSPR+W   + D ++ LGF +   + C+Y+ RDG + + VA+YVDDLV++ S+  ++   K +L+ ++ +TD GEL   LG+++  D+ +    + QT F+K  L KFG+      KTP D  + LT +    G + E +  N+ YRS VG L ++
Sbjct:   63 IDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRDGQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKSMCEGGCQHEDTMKNVPYRSAVGALMYL 294          
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Match: H3H839_PHYRM (Integrase catalytic domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H839_PHYRM)

HSP 1 Score: 194 bits (492), Expect = 3.020e-53
Identity = 96/240 (40.00%), Postives = 152/240 (63.33%), Query Frame = 0
Query:    1 LDYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYVRQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGHESCLYVHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTP---GFKAELSDANL-YRSMVGTLAWVANWTRPEL 236
            +DY +TF+PV    S+R++L+++A  G  +  +D+ TAFLNG + +D+Y+ QP GYV+  HP+ V KL ++LYGLKQSPR+W   + D ++ LGF +   + C+Y+ RDG + + VA+YVDDLV++ SS  ++ + KQ+L+ ++ +TD G+L   LG+++ +D       + QT F KD L KF +D     KTP D  + LT      G K + +  N+ YR+ VG L ++   TRP+L
Sbjct:  496 IDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRDGQDMIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDL 735          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1213.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y6S2_HETAK1.060e-16495.34Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4DD78_HETAK7.760e-10096.08Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y3B6_HETAK3.150e-9161.29Hypothetical protein (Fragment) n=6 Tax=Heterosigm... [more]
A0A7S3Y3C5_HETAK3.420e-6059.28Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
H3H1B2_PHYRM1.120e-5540.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB73_PHYRM1.690e-5538.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7S3Y1P1_HETAK3.210e-5542.68Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
H3H7U0_PHYRM1.380e-5439.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H934_PHYRM2.310e-5439.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H839_PHYRM3.020e-5340.00Integrase catalytic domain-containing protein n=4 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..196
e-value: 2.0E-58
score: 197.9
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..205
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 25..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1213contigH-akashiwo_Contig1213:72816..73523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1213.2.1mRNA_H-akashiwo_Contig1213.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1213 72816..73523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1213.2.1 ID=prot_H-akashiwo_Contig1213.2.1|Name=mRNA_H-akashiwo_Contig1213.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=236bp
LDYQQTFSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAITDDVYV
RQPPGYVNPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLVSLGFTRSGH
ESCLYVHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQG
ELTQILGIKVVRDKRNKCFHLPQTSFIKDALAKFGLDYLPACKTPLDHTV
DLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf