prot_H-akashiwo_Contig121.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig121.5.1
Unique Nameprot_H-akashiwo_Contig121.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length60
Homology
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BLAST of mRNA_H-akashiwo_Contig121.5.1 vs. uniprot
Match: A0A7S2V6V0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6V0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.940e-13
Identity = 35/59 (59.32%), Postives = 48/59 (81.36%), Query Frame = 0 
Query:    1 MCYQFEYLIKTSKFFVHNIGVITTNSVGDLYTLIVLAPEAKW-DEKKNKLAKVAASFQL 58
            + YQFEY+IKTSK  +HNIGV+T  +  +LYTLIVLAPE +W  +K+ +L++VA+SFQL
Sbjct:  109 LVYQFEYIIKTSKVELHNIGVVTARN-NNLYTLIVLAPENEWFGQKQKELSQVASSFQL 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig121.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2V6V0_9STRA3.940e-1359.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 1..58
e-value: 6.7E-11
score: 44.3
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 2..57
e-value: 3.7E-10
score: 40.1
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 3..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig121contigH-akashiwo_Contig121:230882..246473 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig121.5.1mRNA_H-akashiwo_Contig121.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig121 230882..246529 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig121.5.1 ID=prot_H-akashiwo_Contig121.5.1|Name=mRNA_H-akashiwo_Contig121.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=60bp
MCYQFEYLIKTSKFFVHNIGVITTNSVGDLYTLIVLAPEAKWDEKKNKLA
KVAASFQLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand