prot_H-akashiwo_Contig1194.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1194.5.1
Unique Nameprot_H-akashiwo_Contig1194.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length134
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1194.5.1 vs. uniprot
Match: A0A0G4I0G0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I0G0_9ALVE)

HSP 1 Score: 65.1 bits (157), Expect = 1.230e-9
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0 
Query:   14 AVHHQSTLLGYGVVCALYTVLGFNITCYGLCYCIGFKRESALQRCVVVSALILALHAG 71
            AV  +S  LG+  V  +YTVLGF++ C+GLC+CIGF  E+++ RCV  S L+L    G
Sbjct:  450 AVRFESEFLGFLTVMCVYTVLGFSVVCFGLCWCIGFDSEASMARCVGASGLLLGAFVG 507
[Close]
BLAST of mRNA_H-akashiwo_Contig1194.5.1 vs. uniprot
Match: A0A7S2MEU7_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2MEU7_9DINO)

HSP 1 Score: 57.8 bits (138), Expect = 2.860e-7
Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 0 
Query:    6 LALCWVPLAVHHQSTLLGYGVVCALYTVLGFNITCYGLCYCIGFKRESALQRCVVVSALILALHAGAGVM 75
            +AL   PLA+ H S L+G+  V ALY  +GF    +G+ + IGF+   AL RC+  S L++ L  G  V+
Sbjct:   70 IALTMAPLAIAHDSRLIGFCAVAALYGAMGFVFLAFGMGFLIGFQGRDALHRCLACSVLLVLLFVGLRVV 139
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1194.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0G4I0G0_9ALVE1.230e-948.28Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S2MEU7_9DINO2.860e-740.00Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1194contigH-akashiwo_Contig1194:309869..315243 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1194.5.1mRNA_H-akashiwo_Contig1194.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1194 309834..324250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1194.5.1 ID=prot_H-akashiwo_Contig1194.5.1|Name=mRNA_H-akashiwo_Contig1194.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=134bp
MLHGWLALCWVPLAVHHQSTLLGYGVVCALYTVLGFNITCYGLCYCIGFK
RESALQRCVVVSALILALHAGAGVMTQALGDGLGPPACAPLRLGRERDGV
RCALPGPADLLSSRYYSPGYAARATPILHARCS*
back to top