prot_H-akashiwo_Contig1153.9.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1153.9.1
Unique Nameprot_H-akashiwo_Contig1153.9.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length54
Homology
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BLAST of mRNA_H-akashiwo_Contig1153.9.1 vs. uniprot
Match: A0A7S2UZW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZW9_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.300e-7
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0 
Query:    1 GGKNSYSVKTKIGNWVEHEYKPGQHGRGFQSQQFRTNTQDAMEGGLVIAAPKFG 54
            GGKN+YSV+TK GNWVE E+  G    GF + +F +NT      G+     +FG
Sbjct:   18 GGKNTYSVRTKNGNWVEEEFAGGHMPHGFTNTRFSSNTALQQRDGVGKRQQRFG 71
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1153.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2UZW9_9STRA3.300e-744.44Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1153contigH-akashiwo_Contig1153:240701..241143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1153.9.1mRNA_H-akashiwo_Contig1153.9.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1153 240700..241143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1153.9.1 ID=prot_H-akashiwo_Contig1153.9.1|Name=mRNA_H-akashiwo_Contig1153.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=54bp
GGKNSYSVKTKIGNWVEHEYKPGQHGRGFQSQQFRTNTQDAMEGGLVIAA
PKFG
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