prot_H-akashiwo_Contig1147.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1147.5.1
Unique Nameprot_H-akashiwo_Contig1147.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length188
Homology
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: A0A7S3XLN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLN7_HETAK)

HSP 1 Score: 253 bits (647), Expect = 8.440e-84
Identity = 157/163 (96.32%), Postives = 157/163 (96.32%), Query Frame = 0
Query:   25 FAHCAAAAAAAVLGATDPAGKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWLEEXXXXXXXXXXXXXXXXXXXEEESDS 187
            FAHCAAAAAAAVLGATDPAGKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFRLILQLLYDAEVLAED LLEWADLRRSGDQ     GASAERHAEVLALFQHPQTQEFVTWLEEXXXXXXXXXXXXXXXXXXXEEESDS
Sbjct:    1 FAHCAAAAAAAVLGATDPAGKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFRLILQLLYDAEVLAEDALLEWADLRRSGDQDEDEEGASAERHAEVLALFQHPQTQEFVTWLEEXXXXXXXXXXXXXXXXXXXEEESDS 163          
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: A0A7S2XW38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW38_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.230e-33
Identity = 69/153 (45.10%), Postives = 90/153 (58.82%), Query Frame = 0
Query:    9 NLLLEIKSFKFAQNKTFAHCAAAAAAAVLGATDPAGKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWLE 161
            NLLLEIK FKFAQN TFA+C       +L   +      M + +  K TL TW  LI+ L +++ D++ VIK  E +V+ S  K TL PLFRL+LQ++YD +V++ED LL W DLRR+ D              E   LF HPQTQ FV W+E
Sbjct:   13 NLLLEIKGFKFAQNCTFANCLQGVVPGILDLVEIGSSDQMALASKMKLTLTTWKSLITDLSMDENDELEVIKTTEFWVLSSEHKETLTPLFRLVLQIMYDLDVVSEDALLAWIDLRRNED-------------GEEKVLFDHPQTQAFVEWIE 152          
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: A0A835YX04_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX04_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.440e-26
Identity = 68/162 (41.98%), Postives = 92/162 (56.79%), Query Frame = 0
Query:    4 GAGVDNLLLEIKSFKFAQNKTFAHCAAAAAAAVL---GATDPAGKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWLEE 162
            G  +DNLLLEIK +KFAQN++FA C  A+  AVL   G   P     M +V   +  L  W  L+S+L     DQ+ VI A+E+Y ++  +   L  +FR ILQLLYD EV++E+ + +W  LRRSG              A  + LF  PQTQEF+ WLE+
Sbjct:  579 GHPIDNLLLEIKGYKFAQNRSFAECIRASTEAVLDLAGCGKPDAAAGMPLVAAVREQLQLWKTLLSRLAQNAADQVEVIMAVEQYALRPGKATPLAGVFRFILQLLYDTEVVSEEGMEQWIALRRSGPAT-----------APEMTLFNAPQTQEFIAWLED 729          
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: D8LKA1_ECTSI (eIF-2B GDP-GTP exchange factor subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA1_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.620e-20
Identity = 61/159 (38.36%), Postives = 83/159 (52.20%), Query Frame = 0
Query:    4 GAGVDNLLLEIKSFKFAQNKTFAHCAAAAAAAVLGATDPAGKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWLEE 162
            G  +DNLLLEIKS+KFAQN+ F  C   A   VL          M +V   K  L  W  L+SKL VE  D + +IK +E Y ++   + TL  +FR ++Q  +  E+++ED L  W  LRR+  QG   RG           LF+  + Q FV WLE+
Sbjct:  485 GHPLDNLLLEIKSYKFAQNREFKECMRPAVELVLDLAGADTGNGMALVAAVKTQLRHWKPLLSKLNVEAGDDVEMIKVVESYALRPECEGTLRAVFRYVVQSFFQEEMVSEDCLERWIQLRRATPQGSPERG-----------LFEQKEVQAFVAWLED 632          
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: A0A485LK47_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK47_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.700e-20
Identity = 62/160 (38.75%), Postives = 81/160 (50.62%), Query Frame = 0
Query:    3 GGAGVDNLLLEIKSFKFAQNKTFAHCAAAAAAAVLGATDPAGKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWLEE 162
            GG  VDNL LEIKS+KFAQN++FA C AA    +      A KT MQIV   K  L  W  ++ K  + D ++ A+++ +  Y V  A  AT   LFR ILQ+ YD E + ED + +W                +A  H     L Q P  QEF+ WL E
Sbjct:  556 GGDDVDNLFLEIKSYKFAQNRSFADCLAAIIPGLCNLIPRANKTPMQIVALLKPKLEKWSGVVKKCIMNDTERDAIVEILATYCVDPANAATFSKLFRFILQIAYDLEWVTEDNIFDWEA------------NTAAPGHP---TLVQDPALQEFLEWLRE 700          
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: A0A418D8Y5_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418D8Y5_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.650e-20
Identity = 61/158 (38.61%), Postives = 83/158 (52.53%), Query Frame = 0
Query:    3 GGAGVDNLLLEIKSFKFAQNKTFAHCAAAAAAAVLGATDPAGKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWL 160
            GG GVDNL LEIKS+KFAQN++FA C AA    +      A KT MQI+   K  L  W  ++ K  + D +++A+++ +  Y ++ A  AT   LFR ILQ+ YD E + ED + EW D               A  H    +L Q    QEF+ WL
Sbjct:  554 GGDGVDNLFLEIKSYKFAQNRSFADCLAAILPGLCNLIPRANKTDMQILALLKPKLEKWSSVVLKCVMGDVERVAIVEILAAYCLEPANAATYSGLFRFILQIAYDLEWVTEDNIFEWED------------NQDAPGHP---SLVQDAAVQEFLEWL 696          
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: G4Z725_PHYSP (W2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z725_PHYSP)

HSP 1 Score: 96.3 bits (238), Expect = 9.290e-20
Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 0
Query:    4 GAGVDNLLLEIKSFKFAQNKTFAHCAAAAAAAVLGATDPAG--KTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATL-IPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWLEE 162
            G  VD+L +EIKSFKFAQN++FA    A    +L    P G  ++AM I+   +     W  +I +  VE +DQ+AV+ A+E Y  +  E+  + +PLFR +LQ +YD E ++ED +LEW + +++         A  +  ++ LA       QEF+ WL+E
Sbjct:  577 GHNVDDLFMEIKSFKFAQNRSFAEVIGAIVPGLLDLI-PTGNRQSAMTILGNVRTKFQKWSSVIQRCLVEQEDQLAVVDALEGYCTEPEERRVIWLPLFRFLLQTVYDLEWVSEDVILEWHEAKQAN--------ADEDEASDALAAASKKDVQEFIDWLQE 729          
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: A0A024TAS1_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAS1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.250e-19
Identity = 58/158 (36.71%), Postives = 83/158 (52.53%), Query Frame = 0
Query:    3 GGAGVDNLLLEIKSFKFAQNKTFAHCAAAAAAAVLGATDPAGKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWL 160
            GG GVDNL LEIKS+KFAQN++FA C AA    +      A K+ MQI++  K  L  W  +++K  + D +++A+++ +  Y +  A  AT   LFR +LQ+ YD E + ED + EW +               A  H     L   P  QEF+ WL
Sbjct:  553 GGDGVDNLFLEIKSYKFAQNRSFADCLAAILPGLCSLIPRANKSGMQILSLLKPKLEKWSGVVNKCIMGDVERVAIVEILAAYCLDPANAATYAGLFRFVLQIAYDLEWVTEDNIFEWEE------------NEDAPGHP---TLVDDPAVQEFLEWL 695          
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: A0A3M6VHR1_9STRA (W2 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHR1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.270e-19
Identity = 59/161 (36.65%), Postives = 87/161 (54.04%), Query Frame = 0
Query:    4 GAGVDNLLLEIKSFKFAQNKTFAHCAAAAAAAVLGATDPA-GKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATL-IPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWLEE 162
            G  VD+L +EIKSFKFAQN++FA    A    +L     + G++AM I+   +     W  +I +  VE +DQ AV+ A+E Y     E+  L +PLFR +LQ +YD E + ED +LEW + + +         A  E+  + LA   +   QEF+ WL E
Sbjct:  578 GHNVDDLFMEIKSFKFAQNRSFAEVIGAIVPGLLDLIPTSNGQSAMTILGHVRTKFQKWSSVIQRCLVEQEDQQAVVDALESYCAAPEERRALWLPLFRFLLQTVYDLEWVGEDVILEWHEAKATM--------ADKEKSFDALATASNKDVQEFIDWLRE 730          
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Match: A0A2P4YLK1_9STRA (Translation initiation factor eIF-2B subunit epsilon n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLK1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.480e-19
Identity = 58/161 (36.02%), Postives = 87/161 (54.04%), Query Frame = 0
Query:    4 GAGVDNLLLEIKSFKFAQNKTFAHCAAAAAAAVLGATDPA-GKTAMQIVTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATL-IPLFRLILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQHPQTQEFVTWLEE 162
            G  VD+L +EIKSFKFAQN++FA    A    +L       G++AM I+   +     W  +I +  VE +DQ+A++ A+E Y     E+  L +PLFR +LQ +YD E ++ED +LEW D +++            E   + LA       QEF+ WL+E
Sbjct:  278 GHNVDDLFMEIKSFKFAQNRSFAEVIGAIVPGLLDLIPTGNGQSAMTILGNVRTKFQKWSSVIQRCIVEQEDQVAIVDALEGYCSSPEERRVLWLPLFRFLLQTVYDLEWVSEDVILEWHDTKQTV-------AGEKEHTLDPLAASSKKDVQEFIDWLQE 431          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1147.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XLN7_HETAK8.440e-8496.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XW38_9STRA6.230e-3345.10Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YX04_9STRA3.440e-2641.98eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
D8LKA1_ECTSI2.620e-2038.36eIF-2B GDP-GTP exchange factor subunit epsilon n=2... [more]
A0A485LK47_9STRA2.700e-2038.75eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A418D8Y5_9STRA3.650e-2038.61eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
G4Z725_PHYSP9.290e-2035.80W2 domain-containing protein n=4 Tax=Phytophthora ... [more]
A0A024TAS1_9STRA1.250e-1936.71eIF-2B GDP-GTP exchange factor subunit epsilon n=2... [more]
A0A3M6VHR1_9STRA1.270e-1936.65W2 domain-containing protein n=2 Tax=Peronospora e... [more]
A0A2P4YLK1_9STRA1.480e-1936.02Translation initiation factor eIF-2B subunit epsil... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003307W2 domainSMARTSM00515542_3coord: 62..166
e-value: 6.0E-10
score: 49.0
IPR003307W2 domainPFAMPF02020W2coord: 74..170
e-value: 2.7E-16
score: 59.5
IPR003307W2 domainPROSITEPS51363W2coord: 1..170
score: 22.034092
NoneNo IPR availableGENE3D1.25.40.180coord: 3..170
e-value: 1.8E-34
score: 121.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..187
NoneNo IPR availablePANTHERPTHR45887TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILONcoord: 7..170
NoneNo IPR availablePANTHERPTHR45887:SF1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILONcoord: 7..170
IPR044123Translation initiation factor eIF-2B subunit epsilon, W2 domainCDDcd11558W2_eIF2B_epsiloncoord: 7..160
e-value: 1.18661E-28
score: 102.722
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 6..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1147contigH-akashiwo_Contig1147:347647..370991 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1147.5.1mRNA_H-akashiwo_Contig1147.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1147 347430..372572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1147.5.1 ID=prot_H-akashiwo_Contig1147.5.1|Name=mRNA_H-akashiwo_Contig1147.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=188bp
MGGGAGVDNLLLEIKSFKFAQNKTFAHCAAAAAAAVLGATDPAGKTAMQI
VTGYKNTLATWGELISKLCVEDKDQMAVIKAIEKYVVQSAEKATLIPLFR
LILQLLYDAEVLAEDTLLEWADLRRSGDQGRGRRGASAERHAEVLALFQH
PQTQEFVTWLEEEDDDDDDESGSSDDGESGSEEESDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003307W2_domain
IPR044123W2_eIF2B_epsilon
IPR016024ARM-type_fold