prot_H-akashiwo_Contig114.12.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig114.12.1
Unique Nameprot_H-akashiwo_Contig114.12.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length290
Homology
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BLAST of mRNA_H-akashiwo_Contig114.12.1 vs. uniprot
Match: A0A7S2V3L7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3L7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.770e-18
Identity = 103/256 (40.23%), Postives = 123/256 (48.05%), Query Frame = 0 
Query:   31 GRGPAYSLTGRPTET--VNEEXXXXXXXXXXXXRRQGGTY---MMHGRDSRFHYRPDTNPGPGAYGLGTTVGNAPAFSLSGRIDRRGRDMDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNEG---KGWSLGARTEYQGNGRADXXXXXXXIRPMSAPSGTRKSAAFGKDRRFHNQHSXXXXXXXXXRPSSGLVYTDPTKGISLKGRPKDPRPEGGGEYLYPERTHAGDHAFVGRREFGH 278
            G+G A+S+TG+PT+    N+              R+       +M     RFHY    NPGPG YG+ TTVG APAFSLSGR+ R     +                                XXXXXXXXXXX   +G   KG+S+             XXXXXX IRP SAP    K  A G+ +RF     XXXXXXXXX    G V  D  KG+SL  +         GEYLYP RT+AGDHA VGR E+GH
Sbjct:  172 GKGLAFSITGKPTDANRYNDSPGPGAYSANRFKARERNVTHAPIMTKSGDRFHYGRSDNPGPGHYGIDTTVGKAPAFSLSGRVGRSNDRDNVPGPGAYRPQSAPPGRGNSKSMGKARRFRDGPXXXXXXXXXXXLRGQGRDTKGFSMSGXXXXXXX-XXXXXXXXXYIRPSSAPLHRPKGGAMGRSQRFRRNXXXXXXXXXXXMTGPGAVRPD--KGVSLHAKLPQHEKRDTGEYLYPRRTYAGDHAMVGREEWGH 424
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig114.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2V3L7_9STRA5.770e-1840.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010736Sperm-tail PG-rich repeatPFAMPF07004SHIPPO-rptcoord: 51..76
e-value: 0.32
score: 12.0
coord: 151..174
e-value: 0.065
score: 14.2
coord: 16..42
e-value: 0.028
score: 15.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..261
NoneNo IPR availablePANTHERPTHR21580:SF28AT18965Pcoord: 11..173
coord: 116..241
NoneNo IPR availablePANTHERPTHR21580SHIPPO-1-RELATEDcoord: 11..173
coord: 116..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig114contigH-akashiwo_Contig114:1008145..1009014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig114.12.1mRNA_H-akashiwo_Contig114.12.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig114 1007242..1009031 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig114.12.1 ID=prot_H-akashiwo_Contig114.12.1|Name=mRNA_H-akashiwo_Contig114.12.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=290bp
MGGKRKTKVDAGRDVPGPGAYRPDGHYRGHGRGPAYSLTGRPTETVNEEA
PGPGAYSADGNRRQGGTYMMHGRDSRFHYRPDTNPGPGAYGLGTTVGNAP
AFSLSGRIDRRGRDMDTPGPGSYVRPSTAPNRRDRSLGTDQRFRYKNNEV
PGPGAYKQPNPNEGKGWSLGARTEYQGNGRADAPGPGAYIRPMSAPSGTR
KSAAFGKDRRFHNQHSSDAPGPGAYRPSSGLVYTDPTKGISLKGRPKDPR
PEGGGEYLYPERTHAGDHAFVGRREFGHGYVGGGGYSAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010736SHIPPO-rpt