prot_H-akashiwo_Contig114.1.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig114.1.1
Unique Nameprot_H-akashiwo_Contig114.1.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length79
Homology
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BLAST of mRNA_H-akashiwo_Contig114.1.1 vs. uniprot
Match: A0A6V1PD14_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PD14_HETAK)

HSP 1 Score: 102 bits (254), Expect = 5.800e-25
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0 
Query:    4 GGTESLTTDDVSELIALANVIKNDKVKAAKGKTKSXXXXXXXXXXXXXXHEDTFGGDFXXXXXXTGYDDVYDDFM 78
            G TESLTTDDVSELIALANVIKNDKVKAAKGKTKSXXXXXXXXXXXXX HEDTFGGDFXXXXXXTGYDDVYDDFM
Sbjct:  185 GSTESLTTDDVSELIALANVIKNDKVKAAKGKTKSXXXXXXXXXXXXXAHEDTFGGDFXXXXXXTGYDDVYDDFM 259
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig114.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6V1PD14_HETAK5.800e-2597.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013906Eukaryotic translation initiation factor 3 subunit JPFAMPF08597eIF3_subunitcoord: 7..78
e-value: 1.3E-8
score: 35.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig114contigH-akashiwo_Contig114:38445..48581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig114.1.1mRNA_H-akashiwo_Contig114.1.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig114 38258..48581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig114.1.1 ID=prot_H-akashiwo_Contig114.1.1|Name=mRNA_H-akashiwo_Contig114.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=79bp
MGGGGTESLTTDDVSELIALANVIKNDKVKAAKGKTKSKKKTQKKDAAAK
KAHEDTFGGDFDGGKYDTGYDDVYDDFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013906eIF3j