prot_H-akashiwo_Contig1103.10.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1103.10.1
Unique Nameprot_H-akashiwo_Contig1103.10.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length178
Homology
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: A0A6H5K1C9_9PHAE (Ribosomal_L18A domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1C9_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 6.350e-95
Identity = 138/176 (78.41%), Postives = 154/176 (87.50%), Query Frame = 0
Query:    1 MAVMRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTFL 176
            M VMRQYQVVGRKA T  +PNPP+YRMKVF+PNEV   S+FWY MHQMRKMK+TTGEI+D+ E+TEKN  IIKNYGIW++Y+SRSGTHNMYREYRDLTLTGAVDQMYS+MAGRHRCR RSIQIIRTGIVAAKD +RP V Q+  A IKFPL HR+PRA  KK R+TFKASRPTTFL
Sbjct:   29 MVVMRQYQVVGRKAVTEKEPNPPVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNSRIIKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSQMAGRHRCRPRSIQIIRTGIVAAKDTKRPDVKQFHSAKIKFPLTHRLPRAPKKKFRTTFKASRPTTFL 204          
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: A0A835YZJ5_9STRA (Ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ5_9STRA)

HSP 1 Score: 268 bits (686), Expect = 3.020e-89
Identity = 133/176 (75.57%), Postives = 147/176 (83.52%), Query Frame = 0
Query:    1 MAVMRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTFL 176
            M  MRQYQVVGRKAPT  DPNPP YRMKVF+  +V A S FWY +HQMRKMK+TTGEI+DVNEI EKN  IIK+YGIW++Y+SRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCR RSIQIIRTGIVAAKD +R  V Q+  + IKFPLAHRIPR  +KK R+ FKA RP TF 
Sbjct:   32 MPPMRQYQVVGRKAPTEADPNPPAYRMKVFAATKVGAISSFWYLIHQMRKMKKTTGEILDVNEIVEKNARIIKHYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRAPVKQFQNSQIKFPLAHRIPREPSKKFRTVFKAQRPNTFF 207          
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: A0A1V9Z1Q2_9STRA (60S ribosomal protein L18a n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1Q2_9STRA)

HSP 1 Score: 264 bits (675), Expect = 4.980e-88
Identity = 122/175 (69.71%), Postives = 151/175 (86.29%), Query Frame = 0
Query:    1 MAVMRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTF 175
            M  + QYQVVGRKAPT TDPNPP +RMK+F+PNEV+A+SRFWYF+HQM+KMK+TTGEI+ +NE+ EKN  I+KNYGIWI+YNSRSGTHNMY+EYR +TL GAV+QMY+E+AGRHR R RSIQI+RT I+AAKD ++P  +QY  ++IKFPL+HR+PR A K  R+ FKASRPTTF
Sbjct:    1 MPAIHQYQVVGRKAPTETDPNPPAFRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILQINELREKNKRIVKNYGIWIRYNSRSGTHNMYKEYRGVTLCGAVEQMYAELAGRHRARPRSIQIMRTAILAAKDCKKPNTLQYHDSNIKFPLSHRVPRPATKNQRTVFKASRPTTF 175          
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: A0A7S2XX70_9STRA (60S ribosomal protein L18a n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX70_9STRA)

HSP 1 Score: 263 bits (673), Expect = 9.710e-88
Identity = 125/172 (72.67%), Postives = 150/172 (87.21%), Query Frame = 0
Query:    4 MRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTF 175
            MRQYQVVGRKAPTA +P PPL RMK+F+ N V A+SRFWYF+HQMRKMK+TTGEIVDVNEITEKN  ++KNYGIWI+YNSRSGTHNM+RE+RDL LTGAVDQ+Y+EM+GRHR RF S+QIIRT ++ AKD +RP + QY  + IKFPL H+I RA AKK+R+TFKA+RPTT+
Sbjct:    3 MRQYQVVGRKAPTAAEPKPPLLRMKLFARNPVQAQSRFWYFIHQMRKMKKTTGEIVDVNEITEKNSRVVKNYGIWIRYNSRSGTHNMFREFRDLKLTGAVDQLYAEMSGRHRARFSSVQIIRTAVLDAKDCKRPNITQYHDSKIKFPLTHQIRRAPAKKHRTTFKATRPTTY 174          
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: T0R8B2_SAPDV (60S ribosomal protein L18a n=7 Tax=Saprolegniaceae TaxID=4764 RepID=T0R8B2_SAPDV)

HSP 1 Score: 261 bits (667), Expect = 8.240e-87
Identity = 121/175 (69.14%), Postives = 151/175 (86.29%), Query Frame = 0
Query:    1 MAVMRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTF 175
            M  + QYQVVGRKAPT +DPNPP +RMK+F+PNEV+A+SRFWYF+HQM+KMK+TTGEI+ +NE+ EKN  I+KNYG+WI+YNSRSGTHNMY+EYRD+TL GAV+QMY+E+AGRHR R RSIQI+RT I+AAKD ++P  +QY  + IKFPL+HR+PR A K  R+ FKASRPTTF
Sbjct:    1 MPAIHQYQVVGRKAPTESDPNPPAFRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILCLNELREKNKRIVKNYGVWIRYNSRSGTHNMYKEYRDVTLCGAVEQMYAELAGRHRARPRSIQIMRTAILAAKDCKKPNTLQYHDSAIKFPLSHRVPRPANKNQRTVFKASRPTTF 175          
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: A0A7S3NKC2_9STRA (60S ribosomal protein L18a n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKC2_9STRA)

HSP 1 Score: 258 bits (660), Expect = 9.590e-86
Identity = 126/175 (72.00%), Postives = 145/175 (82.86%), Query Frame = 0
Query:    1 MAVMRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTF 175
            M   + YQV+GRKAPT  DP+PP+YRMK+F+PNEV+ARSRFWYFMHQ RKMKR+TGEI+DVNEI EKN  II NYGIW++YNSRSGTHNMYREYR LTLTGAVDQMYSEMAGRHR R RSIQIIRT  V  K+++R A   Y+K ++KFPL HRI R + KK R+TF ASRP TF
Sbjct:    1 MPGFKLYQVIGRKAPTPLDPSPPVYRMKIFAPNEVVARSRFWYFMHQYRKMKRSTGEILDVNEIREKNPRIIHNYGIWLRYNSRSGTHNMYREYRSLTLTGAVDQMYSEMAGRHRARPRSIQIIRTATVKDKELKRVATQMYVKPNLKFPLTHRIMRPSEKKLRTTFAASRPNTF 175          
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: A0A5D6XXS3_9STRA (Ribosomal_L18A domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXS3_9STRA)

HSP 1 Score: 259 bits (662), Expect = 3.340e-85
Identity = 122/175 (69.71%), Postives = 151/175 (86.29%), Query Frame = 0
Query:    1 MAVMRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTF 175
            M ++RQ+QVVGRKAPT  +PNPP YRMK+F+PNEV+A+SRFWYF+HQM+KMK+TTGEI+D+NE+TEKN  I+KNYGIWI+YNSRSGTHNMY+EYRD+TL  AV+Q+Y+E+AGRHR R RSIQI+RT IVAAKD ++  V Q+  + IKFPLA RIPR A K  R+ FKA+RPTTF
Sbjct:   59 MNLIRQFQVVGRKAPTEKEPNPPAYRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILDINELTEKNKRIVKNYGIWIRYNSRSGTHNMYKEYRDVTLCSAVEQLYAELAGRHRARPRSIQIMRTAIVAAKDTKKLNVQQFHDSKIKFPLARRIPRPATKDQRTVFKANRPTTF 233          
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: K3WCT5_GLOUD (60S ribosomal protein L18a n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCT5_GLOUD)

HSP 1 Score: 256 bits (653), Expect = 1.080e-84
Identity = 121/172 (70.35%), Postives = 148/172 (86.05%), Query Frame = 0
Query:    4 MRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTF 175
            +RQ+QVVGRKAPT  +PNPP YRMK+F+PNEV+A+SRFWYF+HQM+KMK+TTGEI+DVNE+TEKN  I+ NYGIWI+YNSRSGTHNMY+EYRD+TL  AV+QMYSE+AGRHR R RSIQI+RT IVAAKD ++  V Q+  + IKFPL+HRI R + K  R+ FKA+RPTTF
Sbjct:    3 IRQFQVVGRKAPTEKEPNPPAYRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILDVNELTEKNKRIVNNYGIWIRYNSRSGTHNMYKEYRDVTLCKAVEQMYSELAGRHRARPRSIQIMRTAIVAAKDTKKLNVQQFHDSKIKFPLSHRIARPSTKNQRTVFKANRPTTF 174          
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: A0A8K1FN02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN02_PYTOL)

HSP 1 Score: 256 bits (653), Expect = 1.080e-84
Identity = 119/172 (69.19%), Postives = 149/172 (86.63%), Query Frame = 0
Query:    4 MRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTF 175
            +RQ+QVVGRKAPT  +PNPP YRMK+F+ NEV+A+SRFWYF+HQM+KMK+TTGEI+D+NEITEKN  ++ NYGIWI+YNSRSGTHNMY+EYRD+TL  AV+Q+Y+E+AGRHR R RSIQI+RT IVAAKD ++  V Q+  A+IKFPL+HRIPR + K +R+ FKASRP TF
Sbjct:    3 IRQFQVVGRKAPTDKEPNPPAYRMKIFAANEVLAKSRFWYFLHQMKKMKKTTGEILDINEITEKNNRVVNNYGIWIRYNSRSGTHNMYKEYRDVTLCSAVEQLYAELAGRHRARPRSIQIMRTAIVAAKDTKKGNVQQFHDANIKFPLSHRIPRPSIKNHRTVFKASRPCTF 174          
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Match: A0A4D9D2V3_9STRA (60S ribosomal protein L18a n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2V3_9STRA)

HSP 1 Score: 255 bits (651), Expect = 2.410e-84
Identity = 121/174 (69.54%), Postives = 143/174 (82.18%), Query Frame = 0
Query:    2 AVMRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRKMKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFPLAHRIPRAAAKKNRSTFKASRPTTF 175
            A +RQYQVVGR  PT   PNP ++RMK+F+PNEV+A+SRFWYF+HQM KMK+TTGEI+D+NE+ E+N  IIKNY IW+KY+SRSGTHNMYREYRDLTLTGAVDQ+Y+EMAGRHR RFRSIQIIRTG+V AKDV+R   MQY  + IKFPL HRI R   K  R  +KA RP T+
Sbjct:    4 ARLRQYQVVGRHVPTEAQPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDINELVERNSRIIKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYAEMAGRHRARFRSIQIIRTGVVDAKDVKRAHTMQYHNSGIKFPLPHRIQRPPNKSLRGIYKAVRPNTY 177          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1103.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1C9_9PHAE6.350e-9578.41Ribosomal_L18A domain-containing protein n=2 Tax=E... [more]
A0A835YZJ5_9STRA3.020e-8975.57Ribosomal protein L18 n=1 Tax=Tribonema minus TaxI... [more]
A0A1V9Z1Q2_9STRA4.980e-8869.7160S ribosomal protein L18a n=1 Tax=Achlya hypogyna... [more]
A0A7S2XX70_9STRA9.710e-8872.6760S ribosomal protein L18a n=1 Tax=Fibrocapsa japo... [more]
T0R8B2_SAPDV8.240e-8769.1460S ribosomal protein L18a n=7 Tax=Saprolegniaceae... [more]
A0A7S3NKC2_9STRA9.590e-8672.0060S ribosomal protein L18a n=1 Tax=Aureoumbra lagu... [more]
A0A5D6XXS3_9STRA3.340e-8569.71Ribosomal_L18A domain-containing protein n=1 Tax=P... [more]
K3WCT5_GLOUD1.080e-8470.3560S ribosomal protein L18a n=1 Tax=Globisporangium... [more]
A0A8K1FN02_PYTOL1.080e-8469.19Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9D2V3_9STRA2.410e-8469.5460S ribosomal protein L18a n=1 Tax=Nannochloropsis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023573Ribosomal protein 50S-L18Ae/60S-L20/60S-L18APFAMPF01775Ribosomal_L18Acoord: 4..125
e-value: 9.2E-53
score: 177.5
NoneNo IPR availableGENE3D3.10.20.10coord: 69..142
e-value: 1.6E-36
score: 126.3
NoneNo IPR availableGENE3D3.10.20.10coord: 1..68
e-value: 7.3E-32
score: 110.9
NoneNo IPR availablePANTHERPTHR10052:SF160S RIBOSOMAL PROTEIN L18Acoord: 3..175
NoneNo IPR availableSUPERFAMILY160374RplX-likecoord: 71..143
IPR02113860S ribosomal protein L18a/ L20, eukaryotesPIRSFPIRSF002190Ribosomal_L18acoord: 1..176
e-value: 1.8E-74
score: 246.9
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aPANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 3..175
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aHAMAPMF_00273Ribosomal_L18Aecoord: 4..67
score: 21.947763

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1103contigH-akashiwo_Contig1103:347777..348778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1103.10.1mRNA_H-akashiwo_Contig1103.10.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1103 347736..348816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1103.10.1 ID=prot_H-akashiwo_Contig1103.10.1|Name=mRNA_H-akashiwo_Contig1103.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=178bp
MAVMRQYQVVGRKAPTATDPNPPLYRMKVFSPNEVIARSRFWYFMHQMRK
MKRTTGEIVDVNEITEKNCNIIKNYGIWIKYNSRSGTHNMYREYRDLTLT
GAVDQMYSEMAGRHRCRFRSIQIIRTGIVAAKDVRRPAVMQYLKADIKFP
LAHRIPRAAAKKNRSTFKASRPTTFLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023573Ribosomal_L18a//L18Ae/LX
IPR021138Ribosomal_L18a/L20_eukaryotes
IPR02887750S_L18Ae/Ribosomal_L18a/L20