prot_H-akashiwo_Contig11.34.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig11.34.1
Unique Nameprot_H-akashiwo_Contig11.34.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length187
Homology
BLAST of mRNA_H-akashiwo_Contig11.34.1 vs. uniprot
Match: A0A7S2UXI7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXI7_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.500e-41
Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 0
Query:   17 IARFVVNIKEVKEVVKMDVLGHCDPYFVMKYGEQEQTTSIKENCSEAVYDEEFEFLV-EPGVNKLTIFAMDKDMLSSQQFGKTIFDLQHTPIKGWIPMFDENA--KKIGCTLKLSITYYDPLTPAHIIAAKAHGCWGGVSRAFNDVCRHPDETAVST 170
            + R+ V+I E KE++K+D++GHC PYFV+KYG+Q+Q T+IKEN  +  ++E + F V +  V  + IFA  K+M++S+ FGK   DL H P+ GW  M++     K  G  LKL ITY +P  P+H  A KAHGC+ G    F  + RHPDE    +
Sbjct:   13 LPRYYVDIIEAKEIIKIDLIGHCSPYFVIKYGDQQQQTTIKENIDQGTWNERYTFYVRDKSVRFIEIFAFSKNMVNSEIFGKVTIDLTHVPLAGWFEMYNTRKPDKPKGANLKLEITYENPNAPSHPFAKKAHGCFAGFWEVFLRLWRHPDEVKAES 169          
BLAST of mRNA_H-akashiwo_Contig11.34.1 vs. uniprot
Match: A0A7S2UUK0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUK0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.990e-30
Identity = 56/147 (38.10%), Postives = 90/147 (61.22%), Query Frame = 0
Query:   18 ARFVVNIKEVKEVVKMDVLGHCDPYFVMKYGEQEQTTSIKENCSEAVYDEEFEFLVEPGVNKLTIFAMDKDMLSSQQFGKTIFDLQHTPIKGWIPMFDENAK-KIGCTLKLSITYYDPLTPAHI-IAAKAHGCWGGVSRAFNDVCRH 162
            A++V+ + E K+++KMD++GHCDPYF++KYG+ E  TSIK+NCS A+++E F F     ++ L IF  DKD+L+S+ FGK   +L   P  GWI M++E    +    +++ I Y+DP     +    +A  C+ G  +    + RH
Sbjct:   16 AKYVITVVEGKDIMKMDLIGHCDPYFILKYGDYEARTSIKQNCSAALWNERFHFQEIDDIHVLEIFGYDKDLLASEFFGKVNIELSRIPFDGWIIMWNEKRSGQKSAEVRIRIEYFDPQDDLFLPTQQRALCCFDGFVKILGQLFRH 162          
BLAST of mRNA_H-akashiwo_Contig11.34.1 vs. uniprot
Match: A0A7S2UXQ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXQ8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.510e-24
Identity = 53/134 (39.55%), Postives = 86/134 (64.18%), Query Frame = 0
Query:   20 FVVNIKEVKEVVKMDVLGHCDPYFVMKYGEQEQTTSIKENCSEAVYDEEFEF-LVEPGVNKLTIFAMDKDMLSSQQFGKTIFDLQHT-PIKGWIPMF---DENAKKIGCTLKLSITYYDPLTPAHIIAAKAHGC 148
            + V ++E K++VKMD++G+CDPYFVM+YG QEQ T+ K+N +  V++E F F +V+  +  L I+A D++   S  FG+ + ++  + P +GW+ M+   D +  K G +LK+SITY DP +     A K+  C
Sbjct:   46 YTVKVQEAKDIVKMDMIGYCDPYFVMRYGSQEQRTTTKQNANSGVWNETFRFPVVDDAIENLEIYAYDQEANKSGFFGRCMLNIATSVPFEGWVEMWNPQDADHPK-GASLKISITYNDPTS-----AKKSENC 173          
BLAST of mRNA_H-akashiwo_Contig11.34.1 vs. uniprot
Match: L1IE92_GUITC (C2 domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IE92_GUITC)

HSP 1 Score: 49.7 bits (117), Expect = 6.900e-5
Identity = 25/71 (35.21%), Postives = 41/71 (57.75%), Query Frame = 0
Query:   22 VNIKEVKEVVKMDVLGHCDPYFVMKYGEQEQTTSIKENCSEAVYDEEFEFLVEPGVNK-LTIFAMDKDMLS 91
            V I+    + KMDVLG CD Y ++++G+ ++ TS  +      ++EEF FLV  G  + L +  MD D ++
Sbjct:    1 VGIQSAANLPKMDVLGSCDAYCILQWGDDQRKTSTIKGSYNPTWNEEFRFLVSQGQTRDLEVKVMDWDRMT 71          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S2UXI7_9STRA3.500e-4143.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UUK0_9STRA2.990e-3038.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UXQ8_9STRA4.510e-2439.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
L1IE92_GUITC6.900e-535.21C2 domain-containing protein (Fragment) n=1 Tax=Gu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 19..114
e-value: 2.1E-7
score: 40.6
IPR000008C2 domainPFAMPF00168C2coord: 20..112
e-value: 1.4E-12
score: 47.8
IPR000008C2 domainPROSITEPS50004C2coord: 1..115
score: 12.58061
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 4..132
e-value: 3.4E-17
score: 64.6
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 20..140
NoneNo IPR availablePIRSRPIRSR000550-2PIRSR000550-2coord: 19..119
e-value: 2.1E-6
score: 24.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..186
NoneNo IPR availableCDDcd00030C2coord: 20..112
e-value: 9.70973E-13
score: 59.7731

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig11contigH-akashiwo_Contig11:1229650..1248159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig11.34.1mRNA_H-akashiwo_Contig11.34.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig11 1229580..1248546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig11.34.1 ID=prot_H-akashiwo_Contig11.34.1|Name=mRNA_H-akashiwo_Contig11.34.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=187bp
MGNKPATSKDDMHPDDIARFVVNIKEVKEVVKMDVLGHCDPYFVMKYGEQ
EQTTSIKENCSEAVYDEEFEFLVEPGVNKLTIFAMDKDMLSSQQFGKTIF
DLQHTPIKGWIPMFDENAKKIGCTLKLSITYYDPLTPAHIIAAKAHGCWG
GVSRAFNDVCRHPDETAVSTKAPAQQQAPAAPHWRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf