prot_H-akashiwo_Contig107.12.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig107.12.1
Unique Nameprot_H-akashiwo_Contig107.12.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length144
Homology
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A2E0QTY8_9BACT (Translation initiation factor IF-3 n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E0QTY8_9BACT)

HSP 1 Score: 82.0 bits (201), Expect = 2.030e-16
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   76 VNERIQAPEVRVIYEQENIVLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAK 141
            VN+RI+APE+RVIY + N+VL   +AL KA EL LDLV ++P A PPVCKI+D+GK  YE+ K+ K
Sbjct:   12 VNDRIRAPEIRVIYGEHNVVLPTHKALSKAKELGLDLVEIAPHARPPVCKIVDYGKWKYEQSKQKK 77          
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A2E2EJX1_9FLAO (Translation initiation factor IF-3 n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2E2EJX1_9FLAO)

HSP 1 Score: 80.9 bits (198), Expect = 2.620e-16
Identity = 35/71 (49.30%), Postives = 57/71 (80.28%), Query Frame = 0
Query:   73 LKLVNERIQAPEVRVIYEQENIVLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAKEV 143
            L  +NE+I AP VR++ + E+ +++IKEAL KA++++LDLV +SP+A PPVCK++D+ K +Y++KKK K +
Sbjct:   16 LHKINEKISAPFVRIVGDVESKIISIKEALHKASQMNLDLVEISPNAEPPVCKLIDYKKFIYDQKKKQKAI 86          
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A848WXU8_9BACT (Translation initiation factor IF-3 (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A848WXU8_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 4.110e-16
Identity = 38/66 (57.58%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   76 VNERIQAPEVRVIYEQENIVLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAK 141
            VNERI+APEVRVIY++ N+VL   +AL KA EL LDLV ++P+  PPVC+I+D+GK  Y++ K+ K
Sbjct:    4 VNERIRAPEVRVIYKEHNLVLPTHKALGKAKELGLDLVEIAPNVRPPVCRIVDYGKWKYDQSKQKK 69          
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A497DKZ7_9BACT (Translation initiation factor IF-3 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A497DKZ7_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 1.070e-15
Identity = 39/69 (56.52%), Postives = 55/69 (79.71%), Query Frame = 0
Query:   76 VNERIQAPEVRVIYEQ-ENIVLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAKEV 143
            +NERI+AP VR++    E+ +  +++ALQKA EL+LDLV +SP+A PPVCKI+D+ K LYE+KKK KE+
Sbjct:   23 INERIKAPVVRLVGGNVESDIYQLRDALQKARELELDLVEISPTANPPVCKIMDYKKFLYEQKKKQKEI 91          
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A3D1E7X0_9FLAO (Translation initiation factor IF-3 n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A3D1E7X0_9FLAO)

HSP 1 Score: 78.6 bits (192), Expect = 1.370e-15
Identity = 38/67 (56.72%), Postives = 54/67 (80.60%), Query Frame = 0
Query:   76 VNERIQAPEVRVIYEQENI-VLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAK 141
            +N+RI AP VR++ +   + + T+++ALQKA EL+LDLV +SP+AAPPVCKILD+ K LYE+KK+ K
Sbjct:    1 MNQRITAPNVRLVGDNIEVGIYTLRDALQKAEELELDLVEISPNAAPPVCKILDYKKFLYEQKKRDK 67          
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A1J5AYK7_9BACT (Translation initiation factor IF-3 n=1 Tax=Bacteroidetes bacterium CG2_30_32_10 TaxID=1805032 RepID=A0A1J5AYK7_9BACT)

HSP 1 Score: 77.8 bits (190), Expect = 2.720e-15
Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 0
Query:   76 VNERIQAPEVRVIYEQ-ENIVLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAKEV 143
            +NERI++P VRV+ E  E  +  IKEALQ A +L LDLV +SP+A PPVCK++D+ K LYE+KKK KE+
Sbjct:    1 MNERIKSPVVRVVGENIEQGIYQIKEALQIATDLGLDLVEISPTANPPVCKVVDYKKFLYEQKKKLKEI 69          
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A7X7Z530_9BACT (Translation initiation factor IF-3 n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X7Z530_9BACT)

HSP 1 Score: 78.2 bits (191), Expect = 2.800e-15
Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 0
Query:   76 VNERIQAPEVRVIYEQ-ENIVLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAKEV 143
            VNERI+AP VRV+ E  E  +L IKEAL  A E+ LDLV ++P+A PPVCK++D+ K +YE+KKK KE+
Sbjct:   20 VNERIKAPVVRVVGENIEQRILPIKEALDLAYEMGLDLVEIAPTANPPVCKLVDYSKFMYEQKKKQKEM 88          
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A419SIM2_9BACL (Translation initiation factor IF-3 n=2 Tax=Ammoniphilus oxalaticus TaxID=66863 RepID=A0A419SIM2_9BACL)

HSP 1 Score: 77.8 bits (190), Expect = 3.180e-15
Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 0
Query:   75 LVNERIQAPEVRVIY---EQENIVLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAKE 142
            L+NE I+A EVRV+    EQE I L I+EALQKA E +LDLV V+P+A PPVC+I+D+GK  YE+ K+ KE
Sbjct:    6 LINEAIRAKEVRVVGAGGEQEGI-LPIREALQKAQEANLDLVAVAPTAKPPVCRIMDYGKYRYEQSKREKE 75          
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A1Y3QRX9_9BACT (Translation initiation factor IF-3 n=12 Tax=root TaxID=1 RepID=A0A1Y3QRX9_9BACT)

HSP 1 Score: 77.8 bits (190), Expect = 3.390e-15
Identity = 38/70 (54.29%), Postives = 55/70 (78.57%), Query Frame = 0
Query:   76 VNERIQAPEVRVIYE--QENIVLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAKEV 143
            +NE+I APEVRV+ +  ++ +VL I+EAL+ A E +LDL+ +SP A PPVC+I D+ K LY++KKKAKE+
Sbjct:   10 INEQITAPEVRVVGDNIEQPVVLPIREALRLAQEQELDLIEISPKAEPPVCRIADYQKFLYQQKKKAKEL 79          
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Match: A0A7V5VZN5_9BACT (Translation initiation factor IF-3 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V5VZN5_9BACT)

HSP 1 Score: 77.4 bits (189), Expect = 3.920e-15
Identity = 40/69 (57.97%), Postives = 55/69 (79.71%), Query Frame = 0
Query:   76 VNERIQAPEVRVIYEQENI--VLTIKEALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAKE 142
            VNE I+A +VRVI +  N   +L+I+EAL+KA E  +DLV +SP+A PPVCKI+D+GK LY+++KKAKE
Sbjct:    3 VNEEIRAKQVRVIDQNGNQLGILSIEEALRKAEEAGVDLVEISPNADPPVCKIIDYGKFLYQKEKKAKE 71          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig107.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E0QTY8_9BACT2.030e-1659.09Translation initiation factor IF-3 n=1 Tax=Verruco... [more]
A0A2E2EJX1_9FLAO2.620e-1649.30Translation initiation factor IF-3 n=1 Tax=Flavoba... [more]
A0A848WXU8_9BACT4.110e-1657.58Translation initiation factor IF-3 (Fragment) n=1 ... [more]
A0A497DKZ7_9BACT1.070e-1556.52Translation initiation factor IF-3 n=1 Tax=Bactero... [more]
A0A3D1E7X0_9FLAO1.370e-1556.72Translation initiation factor IF-3 n=1 Tax=Flavoba... [more]
A0A1J5AYK7_9BACT2.720e-1557.97Translation initiation factor IF-3 n=1 Tax=Bactero... [more]
A0A7X7Z530_9BACT2.800e-1557.97Translation initiation factor IF-3 n=1 Tax=Bactero... [more]
A0A419SIM2_9BACL3.180e-1559.15Translation initiation factor IF-3 n=2 Tax=Ammonip... [more]
A0A1Y3QRX9_9BACT3.390e-1554.29Translation initiation factor IF-3 n=12 Tax=root T... [more]
A0A7V5VZN5_9BACT3.920e-1557.97Translation initiation factor IF-3 n=1 Tax=Bactero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019814Translation initiation factor 3, N-terminalPFAMPF05198IF3_Ncoord: 76..142
e-value: 1.8E-24
score: 85.8
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilyGENE3D3.10.20.80coord: 73..143
e-value: 1.3E-24
score: 88.0
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilySUPERFAMILY54364Translation initiation factor IF3, N-terminal domaincoord: 75..142
IPR001288Translation initiation factor 3TIGRFAMTIGR00168TIGR00168coord: 76..142
e-value: 6.4E-21
score: 72.7
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 74..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig107contigH-akashiwo_Contig107:628378..644646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig107.12.1mRNA_H-akashiwo_Contig107.12.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig107 628378..644646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig107.12.1 ID=prot_H-akashiwo_Contig107.12.1|Name=mRNA_H-akashiwo_Contig107.12.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=144bp
MSFARFFTSNNLGATRGIFVITGCFSKQKAMGNERLRSNFQLARINISCL
QTCILPMAFLLSRNFGTKVPGGLKLVNERIQAPEVRVIYEQENIVLTIKE
ALQKAAELDLDLVCVSPSAAPPVCKILDHGKLLYEEKKKAKEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019814Translation_initiation_fac_3_N
IPR036787T_IF-3_N_sf
IPR001288Translation_initiation_fac_3