prot_H-akashiwo_Contig1028.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1028.4.1
Unique Nameprot_H-akashiwo_Contig1028.4.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length83
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1028.4.1 vs. uniprot
Match: A0A7S3Y5V7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5V7_HETAK)

HSP 1 Score: 132 bits (332), Expect = 3.060e-34
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 
Query:   24 PHDPYLYLVHLVDRLEAQPSYDYSFHRTLISICTIACYPDHLAPEMETSEDLFLLFRKAW 83
            PHDPYLYLVHLVDRLEAQPSYDYSFHRTLISICTIACYPDHLAPEMETSEDLFLLFRKAW
Sbjct:  500 PHDPYLYLVHLVDRLEAQPSYDYSFHRTLISICTIACYPDHLAPEMETSEDLFLLFRKAW 559
[Close]
BLAST of mRNA_H-akashiwo_Contig1028.4.1 vs. uniprot
Match: A0A7S4DCM9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCM9_HETAK)

HSP 1 Score: 120 bits (301), Expect = 4.640e-32
Identity = 51/60 (85.00%), Postives = 58/60 (96.67%), Query Frame = 0 
Query:   24 PHDPYLYLVHLVDRLEAQPSYDYSFHRTLISICTIACYPDHLAPEMETSEDLFLLFRKAW 83
            PHDPYLYLVHLVD LEAQPSYDYSFH TLIS+C+IACYPDH+AP+METS+DL++LFRKAW
Sbjct:   78 PHDPYLYLVHLVDCLEAQPSYDYSFHHTLISVCSIACYPDHIAPDMETSQDLYMLFRKAW 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1028.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3Y5V7_HETAK3.060e-34100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DCM9_HETAK4.640e-3285.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1028contigH-akashiwo_Contig1028:176253..178670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1028.4.1mRNA_H-akashiwo_Contig1028.4.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1028 176253..178672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1028.4.1 ID=prot_H-akashiwo_Contig1028.4.1|Name=mRNA_H-akashiwo_Contig1028.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=83bp
HGAAPPAPAHGPAAGPPGGDRGRPHDPYLYLVHLVDRLEAQPSYDYSFHR
TLISICTIACYPDHLAPEMETSEDLFLLFRKAW
back to top