prot_H-akashiwo_Contig1016.6.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1016.6.1
Unique Nameprot_H-akashiwo_Contig1016.6.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length122
Homology
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: D8LGL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL2_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 9.180e-56
Identity = 87/120 (72.50%), Postives = 101/120 (84.17%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVGAGGRK 121
            I+GVGRRF+ LICK+AEVDP KRAGE+T DEIEKLV +I  P  FK+P WFLNRQKD K+GK  Q+ S  IDQ+LR+DLERLKKIR+HRG+RHY G+RVRGQHTKT+ RRGK V AGGRK
Sbjct:   73 IRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK 192          
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: A0A0D7BV01_9AGAR (Ribosomal protein S13 n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BV01_9AGAR)

HSP 1 Score: 178 bits (452), Expect = 2.330e-55
Identity = 84/120 (70.00%), Postives = 100/120 (83.33%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVGAGGRK 121
            IKGVGRR+S L+CK+A+VD  KRAGEL  DE+E+LV +I  PL FK+P WFLNRQKDI  GKHGQ+ SN +D +LR+DLERLKKIRAHRG+RHY G+RVRGQHTKT+ RRGKTVG   +K
Sbjct:   36 IKGVGRRYSNLVCKKADVDLNKRAGELNSDELERLVTIIQNPLQFKIPSWFLNRQKDIVDGKHGQVLSNGVDSKLRDDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKK 155          
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: A0A6H5KYA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA8_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 3.010e-55
Identity = 86/120 (71.67%), Postives = 100/120 (83.33%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVGAGGRK 121
            I+GVGRRF+ LICK+AEVDP KRAGE+T DEIEKLV +I  P  FK+P WFLNRQKD K+G   Q+ S  IDQ+LR+DLERLKKIR+HRG+RHY G+RVRGQHTKT+ RRGK V AGGRK
Sbjct:   33 IRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAIIQTPRQFKIPDWFLNRQKDWKTGTTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK 152          
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: A0A7S2BE88_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BE88_9STRA)

HSP 1 Score: 177 bits (449), Expect = 5.870e-55
Identity = 83/116 (71.55%), Postives = 99/116 (85.34%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVGA 117
            I G+GRRF+ LICK+AEVDP KRAGELTQDE+EKLV +I  P  FK+P+WFLNRQKD K+G++ Q +SN +  +LREDLERLKKIRAHRG+RHY GIRVRGQHTKT+ RRGKT+ A
Sbjct:   33 ITGIGRRFANLICKKAEVDPNKRAGELTQDEVEKLVAIIQNPKQFKIPMWFLNRQKDYKTGRYQQAFSNNLGAKLREDLERLKKIRAHRGLRHYWGIRVRGQHTKTTGRRGKTMAA 148          
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: A0A7S3PSF1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PSF1_9STRA)

HSP 1 Score: 175 bits (444), Expect = 3.390e-54
Identity = 79/115 (68.70%), Postives = 102/115 (88.70%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVG 116
            IKGVGRRFS +ICK+AE++ +KRAGEL  DE+E+LV +I  PL F++P WFLNR+KD+K+GK+ Q++SN ++Q+LREDLERLKK+RAHRGVRHY GI+VRGQHTKT+ RRG+TVG
Sbjct:   34 IKGVGRRFSNMICKKAEINMSKRAGELQPDEVERLVAIIQNPLQFRIPKWFLNRKKDVKTGKYSQVFSNQLEQKLREDLERLKKMRAHRGVRHYWGIKVRGQHTKTTGRRGRTVG 148          
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: A0A7S2W682_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W682_9STRA)

HSP 1 Score: 176 bits (445), Expect = 4.640e-54
Identity = 81/120 (67.50%), Postives = 103/120 (85.83%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVGAGGRK 121
            IKG+GRRF+ +ICK+AE+D +KRAGEL  DEIE+LV +I  PL F++P WFLNRQKD K+GK+ Q ++N ++Q+LREDLERLKKIRAHRG+RHY GI+VRGQHTKT+ RRG+TVG  G+K
Sbjct:   53 IKGIGRRFANIICKKAEIDMSKRAGELKPDEIERLVAIIQNPLQFRIPQWFLNRQKDHKTGKYSQSFANNLEQKLREDLERLKKIRAHRGLRHYWGIKVRGQHTKTTGRRGRTVGIAGKK 172          
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: A0A7R8XEK0_9CRUS (40S ribosomal protein S18 n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8XEK0_9CRUS)

HSP 1 Score: 173 bits (439), Expect = 2.220e-53
Identity = 79/120 (65.83%), Postives = 103/120 (85.83%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVGAGGRK 121
            IKGVGRR+S ++CK+A++D +KRAGELT++E+EKL+ +I  P  +K+P WFLNRQKDIK GK+ Q+ SN+++ +LREDLERLKKIRAHRG+RHY G+RVRGQHTKT+ RRGKTVG   +K
Sbjct:   35 IKGVGRRYSNVVCKKADIDLSKRAGELTEEEVEKLLTIISNPRQYKIPDWFLNRQKDIKDGKYSQVLSNVLETKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKK 154          
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: A0A194ANH2_PINFU (40S ribosomal protein S18 n=1 Tax=Pinctada fucata TaxID=50426 RepID=A0A194ANH2_PINFU)

HSP 1 Score: 173 bits (438), Expect = 2.860e-53
Identity = 79/120 (65.83%), Postives = 103/120 (85.83%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVGAGGRK 121
            IKG+GRR++ +ICK+A+VD TKRAGEL+++EI+K+V ++  P  +K+P WFLNRQKD+K GK GQ+ SN +D +LREDLERLKKIRAHRG+RHY G+RVRGQHTKT+SRRG+TVG   +K
Sbjct:   33 IKGIGRRYATVICKKADVDVTKRAGELSEEEIDKVVTIMQNPRQYKIPDWFLNRQKDVKDGKFGQVMSNALDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTSRRGRTVGVAKKK 152          
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: UPI000180C23B (40S ribosomal protein S18 n=1 Tax=Ciona intestinalis TaxID=7719 RepID=UPI000180C23B)

HSP 1 Score: 172 bits (436), Expect = 5.770e-53
Identity = 78/120 (65.00%), Postives = 101/120 (84.17%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVGAGGRK 121
            IKG+GRRFS L+CK+A+VD TKRAGEL+ DEI+++V ++  P  +K+P WFLNRQKD++ GK GQ+ SN +D +LRED+ERLKKIRAHRG+RHY G+RVRGQHTKT+ RRG+TVG   +K
Sbjct:   33 IKGIGRRFSTLVCKKADVDLTKRAGELSDDEIDRIVTIMQNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152          
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Match: A0A4P9VXZ3_9FUNG (Ribosomal protein S13 n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VXZ3_9FUNG)

HSP 1 Score: 172 bits (435), Expect = 1.090e-52
Identity = 79/120 (65.83%), Postives = 100/120 (83.33%), Query Frame = 0
Query:    2 IKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPVWFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRVRGQHTKTSSRRGKTVGAGGRK 121
            IKGVGRR+S ++CK+A+VD TKRAGELT DE+E++V ++  P  +K+P WFLNRQKDIK GK  Q+ +N +D +LREDLERLKKIRAHRG+RHY G+RVRGQHTKT+ RRG+TVG   +K
Sbjct:   41 IKGVGRRYSNIVCKKADVDITKRAGELTNDELERIVTILQNPRQYKIPDWFLNRQKDIKDGKFSQVVANGLDNKLREDLERLKKIRAHRGLRHYWGVRVRGQHTKTTGRRGRTVGVAKKK 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1016.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGL2_ECTSI9.180e-5672.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0D7BV01_9AGAR2.330e-5570.00Ribosomal protein S13 n=1 Tax=Cylindrobasidium tor... [more]
A0A6H5KYA8_9PHAE3.010e-5571.67Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A7S2BE88_9STRA5.870e-5571.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3PSF1_9STRA3.390e-5468.70Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S2W682_9STRA4.640e-5467.50Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
A0A7R8XEK0_9CRUS2.220e-5365.8340S ribosomal protein S18 n=1 Tax=Darwinula steven... [more]
A0A194ANH2_PINFU2.860e-5365.8340S ribosomal protein S18 n=1 Tax=Pinctada fucata ... [more]
UPI000180C23B5.770e-5365.0040S ribosomal protein S18 n=1 Tax=Ciona intestinal... [more]
A0A4P9VXZ3_9FUNG1.090e-5265.83Ribosomal protein S13 n=1 Tax=Blyttiomyces helicus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001892Ribosomal protein S13PIRSFPIRSF002134RPS13p_RPS13a_RPS18e_RPS13ocoord: 1..121
e-value: 2.4E-27
score: 93.5
IPR001892Ribosomal protein S13PFAMPF00416Ribosomal_S13coord: 1..111
e-value: 1.4E-39
score: 135.4
IPR001892Ribosomal protein S13PROSITEPS50159RIBOSOMAL_S13_2coord: 1..114
score: 27.581738
NoneNo IPR availableGENE3D1.10.8.50coord: 1..49
e-value: 1.1E-15
score: 59.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..121
NoneNo IPR availablePANTHERPTHR10871:SF340S RIBOSOMAL PROTEIN S18-RELATEDcoord: 1..116
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 1..116
IPR02743730s ribosomal protein S13, C-terminalGENE3D4.10.910.1030s ribosomal protein s13, domain 2coord: 61..111
e-value: 3.0E-21
score: 77.0
IPR018269Ribosomal protein S13, conserved sitePROSITEPS00646RIBOSOMAL_S13_1coord: 90..103
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 2..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1016contigH-akashiwo_Contig1016:122763..133170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1016.6.1mRNA_H-akashiwo_Contig1016.6.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1016 122739..133478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1016.6.1 ID=prot_H-akashiwo_Contig1016.6.1|Name=mRNA_H-akashiwo_Contig1016.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=122bp
MIKGVGRRFSGLICKQAEVDPTKRAGELTQDEIEKLVKVIMEPLHFKVPV
WFLNRQKDIKSGKHGQLYSNLIDQRLREDLERLKKIRAHRGVRHYLGIRV
RGQHTKTSSRRGKTVGAGGRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001892Ribosomal_S13
IPR02743730s_Rbsml_prot_S13_C
IPR018269Ribosomal_S13_CS
IPR010979Ribosomal_S13-like_H2TH